Silent
Missense
Nonsense
Frequency of SNVs in pancancer level
| Cancer | Full Name | Mutation | Mutation Type | Sample Number |
|---|---|---|---|---|
| BLCA | Bladder urothelial carcinoma | D29N | Missense | 1 |
| BLCA | Bladder urothelial carcinoma | E334* | Nonsense | 1 |
| BLCA | Bladder urothelial carcinoma | H387P | Missense | 1 |
| BLCA | Bladder urothelial carcinoma | L322F | Missense | 1 |
| BLCA | Bladder urothelial carcinoma | N150Y | Missense | 1 |
| BLCA | Bladder urothelial carcinoma | R413R | Silent | 1 |
| BLCA | Bladder urothelial carcinoma | S279L | Missense | 1 |
| BRCA | Breast invasive carcinoma | R188Q | Missense | 1 |
| COAD | Colon adenocarcinoma | E24D | Missense | 1 |
| COAD | Colon adenocarcinoma | K181T | Missense | 1 |
| COAD | Colon adenocarcinoma | R188Q | Missense | 1 |
| COAD | Colon adenocarcinoma | T236A | Missense | 1 |
| ESCA | Esophageal carcinoma | A138A | Silent | 1 |
| ESCA | Esophageal carcinoma | A35S | Missense | 1 |
| ESCA | Esophageal carcinoma | Q81H | Missense | 1 |
| HNSC | Head and Neck squamous cell carcinoma | D380H | Missense | 1 |
| HNSC | Head and Neck squamous cell carcinoma | L4L | Silent | 1 |
| HNSC | Head and Neck squamous cell carcinoma | S196F | Missense | 1 |
| KIRP | Kidney renal papillary cell carcinoma | Y70C | Missense | 1 |
| LGG | Brain Lower Grade Glioma | K96N | Missense | 1 |
| LIHC | Liver hepatocellular carcinoma | D159D | Silent | 1 |
| LIHC | Liver hepatocellular carcinoma | D178G | Missense | 1 |
| LUAD | Lung adenocarcinoma | E9Q | Missense | 1 |
| LUAD | Lung adenocarcinoma | G223A | Missense | 1 |
| LUAD | Lung adenocarcinoma | V133V | Silent | 1 |
| LUSC | Lung squamous cell carcinoma | E40Q | Missense | 1 |
| LUSC | Lung squamous cell carcinoma | N198S | Missense | 1 |
| LUSC | Lung squamous cell carcinoma | S123Y | Missense | 1 |
| OV | Ovarian serous cystadenocarcinoma | R270T | Missense | 1 |
| PCPG | Pheochromocytoma and Paraganglioma | L172L | Silent | 1 |
| SKCM | Skin Cutaneous Melanoma | L208L | Silent | 1 |
| SKCM | Skin Cutaneous Melanoma | L4L | Silent | 1 |
| SKCM | Skin Cutaneous Melanoma | S291L | Missense | 1 |
| SKCM | Skin Cutaneous Melanoma | S316F | Missense | 1 |
| STAD | Stomach adenocarcinoma | F46L | Missense | 1 |
| STAD | Stomach adenocarcinoma | K54K | Silent | 1 |
| STAD | Stomach adenocarcinoma | R92* | Nonsense | 1 |
| TGCT | Testicular Germ Cell Tumors | R243L | Missense | 1 |
| UCEC | Uterine Corpus Endometrial Carcinoma | D17Y | Missense | 1 |
| UCEC | Uterine Corpus Endometrial Carcinoma | P343S | Missense | 1 |
| UCEC | Uterine Corpus Endometrial Carcinoma | R243Q | Missense | 1 |
| UCEC | Uterine Corpus Endometrial Carcinoma | S247R | Missense | 1 |
| UCEC | Uterine Corpus Endometrial Carcinoma | S291* | Nonsense | 1 |
Mutational percentage of Silent, Missense and Nonsense for various cancers
Summary of mutation in pancancer level
| Cancer | Full Name | # Sample | % Silent | % Missense | % Nonsense |
|---|---|---|---|---|---|
| BLCA | Bladder urothelial carcinoma | 394 | 11.1 | 16.1 | 33.3 |
| BRCA | Breast invasive carcinoma | 976 | 0 | 3.2 | 0 |
| CESC | Cervical and endocervical cancers | 194 | 0 | 0 | 0 |
| COAD | Colon adenocarcinoma | 367 | 0 | 12.9 | 0 |
| ESCA | Esophageal carcinoma | 185 | 11.1 | 6.5 | 0 |
| GBM | Glioblastoma multiforme | 283 | 0 | 0 | 0 |
| HNSC | Head and Neck squamous cell carcinoma | 511 | 11.1 | 6.5 | 0 |
| KIRC | Kidney renal clear cell carcinoma | 476 | 0 | 0 | 0 |
| KIRP | Kidney renal papillary cell carcinoma | 282 | 0 | 3.2 | 0 |
| LAML | Acute Myeloid Leukemia | 192 | 0 | 0 | 0 |
| LGG | Brain Lower Grade Glioma | 516 | 0 | 3.2 | 0 |
| LIHC | Liver hepatocellular carcinoma | 373 | 11.1 | 3.2 | 0 |
| LUAD | Lung adenocarcinoma | 533 | 11.1 | 6.5 | 0 |
| LUSC | Lung squamous cell carcinoma | 177 | 0 | 9.7 | 0 |
| OV | Ovarian serous cystadenocarcinoma | 465 | 0 | 3.2 | 0 |
| PAAD | Pancreatic adenocarcinoma | 126 | 0 | 0 | 0 |
| PCPG | Pheochromocytoma and Paraganglioma | 179 | 11.1 | 0 | 0 |
| PRAD | Prostate adenocarcinoma | 498 | 0 | 0 | 0 |
| READ | Rectum adenocarcinoma | 122 | 0 | 0 | 0 |
| SARC | Sarcoma | 247 | 0 | 0 | 0 |
| SKCM | Skin Cutaneous Melanoma | 290 | 22.2 | 6.5 | 0 |
| STAD | Stomach adenocarcinoma | 393 | 11.1 | 3.2 | 33.3 |
| TGCT | Testicular Germ Cell Tumors | 147 | 0 | 3.2 | 0 |
| THCA | Thyroid carcinoma | 495 | 0 | 0 | 0 |
| THYM | Thymoma | 119 | 0 | 0 | 0 |
| UCEC | Uterine Corpus Endometrial Carcinoma | 248 | 0 | 12.9 | 33.3 |