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This regulatory network was inferred from the input dataset. The miRNAs and mRNAs are presented as round and rectangle nodes respectively. The numerical value popped up upon mouse over the gene node is the log2 transformed fold-change of the gene expression between the two groups. All of the nodes are clickable, and the detailed information of the miRNAs/mRNAs and related cancer pathway will be displayed in another window. The edges between nodes are supported by both interactions (predicted or experimentally verified) and correlations learnt from cancer dataset. The numerical value popped up upon mouse over the edge is the correlation beat value (effect size) between the two nodes. The experimental evidences of the edges reported in previous cancer studies are highlighted by red/orange color. All of these information can be accessed by the "mouse-over" action. This network shows a full map of the miRNA-mRNA regulation of the input gene list(s), and the hub miRNAs (with the high network degree/betweenness centrality) would be the potential cancer drivers or tumor suppressors. The full result table can be accessed in the "Regulations" tab.

"miRNACancerMAP" is also a network visualization tool for users to draw their regulatory network by personal customization. Users can set the complexity of the network by limiting the number of nodes or edges. And the color of the nodes can be defined by different categories of the mRNAs and miRNAs, such as Gene-Ontology, pathway, and expression status. Users can also select to use network degree or network betweenness centrality to define the node size. And edges can be black or colored by the correlation. Purple edge means negative correlation (mostly found between miRNA and mRNA), and blue edge means positive correlation (found in PPI or miRNA-miRNA sponge effect). We can also add the protein-protein interactions (PPI) into the network. This result will show the cluster of genes regulated by some specific miRNAs. Additionally, miRNA-miRNA edges can be added by the "miRNA sponge" button, presenting some clusters of miRNAs that have the interactions via sponge effect.

miRNA-gene regulations

(Download full result)

Num microRNA           Gene miRNA log2FC miRNA pvalue Gene log2FC Gene pvalue Interaction Correlation beta Correlation P-value PMID Reported in cancer studies
1 hsa-miR-103a-3p PTEN 1.44 0 -0.45 0.00143 miRNAWalker2 validate; miRTarBase -0.18 0 26511107; 24828205 LncRNA GAS5 induces PTEN expression through inhibiting miR 103 in endometrial cancer cells; To investigate the expression of GAS5 PTEN and miR-103 RT-PCR was performed; Finally we found that miR-103 mimic could decrease the mRNA and protein levels of PTEN through luciferase reporter assay and western blotting and GAS5 plasmid may reverse this regulation effect in endometrial cancer cells; Through inhibiting the expression of miR-103 GAS5 significantly enhanced the expression of PTEN to promote cancer cell apoptosis and thus could be an important mediator in the pathogenesis of endometrial cancer;Our data collectively demonstrate that miR-103 is an oncogene miRNA that promotes colorectal cancer proliferation and migration through down-regulation of the tumor suppressor genes DICER and PTEN
2 hsa-miR-106a-5p PTEN 2.49 0 -0.45 0.00143 miRNATAP -0.12 0 26097565; 26318586 miR 106a promotes growth and metastasis of non small cell lung cancer by targeting PTEN; Furthermore the presence of miR-106a was inversely correlated with PTEN in NSCLC tissues; Overall this study suggested that miR-106a inhibited the growth and metastasis of NSCLC cells by decreasing PTEN expression;Further pterostilbene through downregulation of miR-17-5p and miR-106a-5p expression both in tumors and systemic circulation rescued PTEN mRNA and protein levels leading to reduced tumor growth in vivo
3 hsa-miR-106b-5p PTEN 2.47 0 -0.45 0.00143 miRNAWalker2 validate; miRTarBase; miRNATAP -0.17 0 24842611; 26238857; 26722252 MicroRNA 106b in cancer associated fibroblasts from gastric cancer promotes cell migration and invasion by targeting PTEN;We further identified PTEN and p21 as novel direct targets of miR-106b by using target prediction algorithms and a luciferase assay; Overexpression of miR-106b reduced the expression of PTEN and p21 and increased the expression of p-AKT which is a downstream of PTEN; Restoring the expression of PTEN or p21 in stably miR-106b-overexpressed cells could rescue the effect of miR-106b on cell radioresistance; These observations illustrated that miR-106b could induce cell radioresistance by directly targeting PTEN and p21 this process was accompanied by tumour-initiating cell capacity enhancement which is universally confirmed to be associated with radioresistance;Cantharidin modulates the E2F1/MCM7 miR 106b 93/p21 PTEN signaling axis in MCF 7 breast cancer cells
4 hsa-miR-107 PTEN 1.31 0 -0.45 0.00143 miRNAWalker2 validate; PITA; miRanda -0.13 0.00031 NA
5 hsa-miR-130a-3p PTEN 2.02 0 -0.45 0.00143 MirTarget; miRNATAP -0.11 0 26837847; 24490491; 27062783; 22614869; 27040383; 27035216; 26043084 The miR 130 family promotes cell migration and invasion in bladder cancer through FAK and Akt phosphorylation by regulating PTEN; In clinical bladder cancer specimens downregulation of PTEN was found to be closely correlated with miR-130 family expression levels;Down-regulated miR-130a did not affect cell proliferations but enhanced the sensitivity of the cells to cisplatin inhibited the expressions of MDR1 mRNA and P-gp and increased the expression of PTEN proteins; MiR-130a inhibitor can reverse the cisplatin resistance by upregulating the expression of PTEN proteins and down-regulating P-gp in A2780 cell lines;Platinum-resistant patients had significantly higher levels of expression of miR-130a and BCL-2 and lower level of PTEN than platinum-sensitive patients P < 0.05; MiR-130a may mediate the generation of platinum resistance in epithelial ovarian cancer through inhibiting PTEN to activate PI3K/AKT signaling pathway and increasing BCL-2 to inhibit tumor cell apoptosis;We found that miR-130a was upregulated in SKOV3/CIS compared to the parental SKOV3 cells and PTEN was predicted to be the potential target of miR-130a;In addition by targeting PTEN 3' untranslated region miR-130a might increase cell growth and initiate protein kinase B AKT pathway activation;MicroRNA 130a promotes the metastasis and epithelial mesenchymal transition of osteosarcoma by targeting PTEN; MiR-130a exerted promoting effects on metastatic behavior and EMT of osteosarcoma cells through suppressing PTEN expression;This role of miR-130a may be achieved by regulating the MDR1 and PTEN gene expression
6 hsa-miR-130b-3p PTEN 3.54 0 -0.45 0.00143 MirTarget; miRNATAP -0.12 0 26837847; 25637514 The miR 130 family promotes cell migration and invasion in bladder cancer through FAK and Akt phosphorylation by regulating PTEN; In clinical bladder cancer specimens downregulation of PTEN was found to be closely correlated with miR-130 family expression levels;MiR 130b plays an oncogenic role by repressing PTEN expression in esophageal squamous cell carcinoma cells; We confirmed that miR-130b interacted with the 3'-untranslated region of PTEN and that an increase in the expression level of miR-130b negatively affected the protein level of PTEN; However the dysregulation of miR-130b had no obvious impact on PTEN mRNA; As Akt is a downstream effector of PTEN we explored if miR-130b affected Akt expression and found that miR-130b indirectly regulated the level of phosphorylated Akt while total Akt protein remained unchanged; The results indicate that miR-130b plays an oncogenic role in ESCC cells by repressing PTEN expression and Akt phosphorylation which would be helpful in developing miRNA-based treatments for ESCC
7 hsa-miR-148a-3p PTEN 1.27 0 -0.45 0.00143 MirTarget; miRNATAP -0.1 5.0E-5 22496917 Introduction of anti-miR-148a increased PTEN protein and mRNA expression suggesting that PTEN was targeted by miR-148a
8 hsa-miR-148b-3p PTEN 1.98 0 -0.45 0.00143 MirTarget; miRNATAP -0.17 0 NA
9 hsa-miR-15b-3p PTEN 2.34 0 -0.45 0.00143 mirMAP -0.11 1.0E-5 NA
10 hsa-miR-16-2-3p PTEN 2.32 0 -0.45 0.00143 mirMAP -0.1 8.0E-5 NA
11 hsa-miR-17-5p PTEN 3.27 0 -0.45 0.00143 miRNAWalker2 validate; miRTarBase; TargetScan; miRNATAP -0.13 0 27400681; 23391506; 23133552; 26629823; 24462867; 26318586; 26215320; 25634356; 26500892; 24912422; 23418359 GFRα2 prompts cell growth and chemoresistance through down regulating tumor suppressor gene PTEN via Mir 17 5p in pancreatic cancer; Mechanically we discovered that high GFRα2 expression level leads to PTEN inactivation via enhancing Mir-17-5p level;We found that these phenotypes were the results of miR-17 targeting PTEN;PTEN mRNA correlated inversely with miR-92a and members of the miR-17 and miR-130/301 families;We hypothesized that knocking down the oncogenic microRNA oncomiR miR-17-5p might restore the expression levels of PDCD4 and PTEN tumor suppressor proteins illustrating a route to oligonucleotide therapy of TNBC; Contrary to conventional wisdom antisense knockdown of oncomiR miR-17-5p guide strand reduced PDCD4 and PTEN proteins by 1.8±0.3 fold in human TNBC cells instead of raising them; Bioinformatics analysis and folding energy calculations revealed that mRNA targets of miR-17-5p guide strand such as PDCD4 and PTEN could also be regulated by miR-17-3p passenger strand;miR 17 inhibitor suppressed osteosarcoma tumor growth and metastasis via increasing PTEN expression; Expression of miR-17 was negatively correlated with PTEN in OS tissues;Resveratrol and pterostilbene epigenetically restore PTEN expression by targeting oncomiRs of the miR 17 family in prostate cancer; Further pterostilbene through downregulation of miR-17-5p and miR-106a-5p expression both in tumors and systemic circulation rescued PTEN mRNA and protein levels leading to reduced tumor growth in vivo;In addition ERβ expression significantly increased in calycosin-treated HCT-116 cells followed by a decrease of miR-17 and up-regulation of PTEN; Our results indicate that calycosin has an inhibitory effect on CRC which might be obtained by ERβ-mediated regulation of miR-17 and PTEN expression;The High Expression of the microRNA 17 92 Cluster and its Paralogs and the Downregulation of the Target Gene PTEN Is Associated with Primary Cutaneous B Cell Lymphoma Progression;MicroRNA 17 5p induces drug resistance and invasion of ovarian carcinoma cells by targeting PTEN signaling; miR-17-5p activates AKT by downregulation of PTEN in ovarian cancer cells;MicroRNA 17 5p promotes chemotherapeutic drug resistance and tumour metastasis of colorectal cancer by repressing PTEN expression; We found that PTEN was a target of miR-17-5p in the colon cancer cells and their context-specific interactions were responsible for multiple drug-resistance; Chemotherapy was found to increase the expression levels of miR-17-5p which further repressed PTEN levels contributing to the development of chemo-resistance; MiR-17-5p is a predictive factor for chemotherapy response and a prognostic factor for overall survival in CRC which is due to its regulation of PTEN expression;The mature miR-17-5p exerted this function by repressing the expression of PTEN
12 hsa-miR-181c-5p PTEN 1.59 0 -0.45 0.00143 MirTarget; miRNATAP -0.13 0 25695913 miR 181c promotes proliferation via suppressing PTEN expression in inflammatory breast cancer; In this study we showed that miR-181c as an oncogene promoted proliferation and it inhibited PTEN protein expression by targeting 3'-UTR of PTEN mRNA in IBC SUM149 cells; Thus targeting miR-181c and restoration of PTEN can be used in conjunction with other therapies to prevent progression of IBC
13 hsa-miR-181d-5p PTEN 1.52 0 -0.45 0.00143 MirTarget -0.12 0 27006767 Moreover hsa-miR-181d was upregulated to control expression a tumor suppressor gene PTEN to protect the cancer cell from apoptosis
14 hsa-miR-186-5p PTEN 1.47 0 -0.45 0.00143 mirMAP; miRNATAP -0.22 0 NA
15 hsa-miR-188-5p PTEN 2.53 0 -0.45 0.00143 MirTarget; PITA; miRNATAP -0.11 0 NA
16 hsa-miR-18a-5p PTEN 3.79 0 -0.45 0.00143 miRNAWalker2 validate; miRTarBase -0.11 0 24681249; 27291152 However higher levels of the miR-17~92 cluster switched from PTEN to oncogenes including Ctnnb1 β-catenin via miR-18a which resulted in inhibition of tumor growth and metastasis;miR 18a promotes cell proliferation of esophageal squamous cell carcinoma cells by increasing cylin D1 via regulating PTEN PI3K AKT mTOR signaling axis
17 hsa-miR-193a-3p PTEN 1.6 0 -0.45 0.00143 PITA; miRanda -0.11 0 26753960; 23223432 Downregulation of microRNA 193 3p inhibits tumor proliferation migration and chemoresistance in human gastric cancer by regulating PTEN gene;Our study identifies miR-193a and PTEN as targets for AML1/ETO and provides evidence that links the epigenetic silencing of tumor suppressor genes miR-193a and PTEN to differentiation block of myeloid precursors
18 hsa-miR-19a-3p PTEN 3.42 0 -0.45 0.00143 miRNAWalker2 validate; miRTarBase; MirTarget; miRNATAP -0.13 0 25107371; 27445062; 26098000; 24831732; 21853360; 24681249; 27289489 The target of miR-19a was identified by western blot and whether its regulatory role depends on its target was improved by a rescue experiment with miR-19a mimic and PTEN expression plasmid; Meanwhile gain or loss of function of miR-19a demonstrated that miR-19a can promote cell growth of bladder cancer cells and the further mechanism studies indicated that its oncogenic role was dependent on targeting PTEN; The oncogenic role of miR19a in bladder cancer was dependent on targeting PTEN;The target genes of miR-19a such as ABCA1 and PTEN that had been suppressed by miR recovered their expression through CAP treatment;Moreover siRNA-mediated knockdown of PTEN a target of miR-19 also resulted in EMT migration and invasion of A549 and HCC827 cells suggesting that PTEN is involved in miR-19-induced EMT migration and invasion of lung cancer cells;Meanwhile BPA-induced upregulation of oncogenic miR-19a and miR-19b and the dysregulated expression of miR-19-related downstream proteins including PTEN p-AKT p-MDM2 p53 and proliferating cell nuclear antigen were reversed by curcumin;Regulation of miR 19 to breast cancer chemoresistance through targeting PTEN; Expression levels of miR-19 in MDR cells were inversely consistent with those of PTEN; Our findings demonstrate for the first time involvement of miR-19 in multidrug resistance through modulation of PTEN and suggest that miR-19 may be a potential target for preventing and reversing MDR in tumor cells;miR-19 in the context of the miR-17~92 cluster at medium levels promoted tumor metastasis through induction of Wnt/β-catenin-mediated epithelial-mesenchymal transition by targeting to the tumor-suppressor gene PTEN;Transfection of miR-19a and -19b mimics reversed the up-regulations of IGF2R and PTEN gene expression and abrogated the GSE induced anti-proliferative response
19 hsa-miR-19b-3p PTEN 2.5 0 -0.45 0.00143 miRNAWalker2 validate; miRTarBase; MirTarget; miRNATAP -0.17 0 26098000; 24831732; 21853360; 24681249 Moreover siRNA-mediated knockdown of PTEN a target of miR-19 also resulted in EMT migration and invasion of A549 and HCC827 cells suggesting that PTEN is involved in miR-19-induced EMT migration and invasion of lung cancer cells;Meanwhile BPA-induced upregulation of oncogenic miR-19a and miR-19b and the dysregulated expression of miR-19-related downstream proteins including PTEN p-AKT p-MDM2 p53 and proliferating cell nuclear antigen were reversed by curcumin;Regulation of miR 19 to breast cancer chemoresistance through targeting PTEN; Expression levels of miR-19 in MDR cells were inversely consistent with those of PTEN; Our findings demonstrate for the first time involvement of miR-19 in multidrug resistance through modulation of PTEN and suggest that miR-19 may be a potential target for preventing and reversing MDR in tumor cells;miR-19 in the context of the miR-17~92 cluster at medium levels promoted tumor metastasis through induction of Wnt/β-catenin-mediated epithelial-mesenchymal transition by targeting to the tumor-suppressor gene PTEN
20 hsa-miR-20a-5p PTEN 3.16 0 -0.45 0.00143 miRNAWalker2 validate; miRTarBase; miRNATAP -0.12 0 26031366 The expression of miR-20a and PTEN were detected in HCC cell lines and paired primary tissues by quantitative real-time polymerase chain reaction; MiR-20a levels were increased in HCC cell lines and tissues whereas PTEN was inversely correlated with it; PTEN was identified as a direct functional target of miR-20a for the induction of radioresistance
21 hsa-miR-25-3p PTEN 1.36 0 -0.45 0.00143 miRTarBase; MirTarget; miRNATAP -0.2 0 NA
22 hsa-miR-28-5p PTEN 0.23 0.07429 -0.45 0.00143 miRanda -0.11 0.04188 NA
23 hsa-miR-301a-3p PTEN 2.81 0 -0.45 0.00143 MirTarget; miRNATAP -0.12 0 24315818; 26846737 Upregulated microRNA 301a in breast cancer promotes tumor metastasis by targeting PTEN and activating Wnt/β catenin signaling; Furthermore miR-301a directly targeted and suppressed PTEN one negative regulator of the Wnt/β-catenin signaling cascade; These results demonstrate that miR-301a maintains constitutively activated Wnt/β-catenin signaling by directly targeting PTEN which promotes breast cancer invasion and metastasis;MicroRNA 301a promotes cell proliferation via PTEN targeting in Ewing's sarcoma cells; Our results demonstrated the novel mechanism controlling PTEN expression via miR-301a in ES cells
24 hsa-miR-30b-5p PTEN 0.8 0.00013 -0.45 0.00143 mirMAP -0.15 0 NA
25 hsa-miR-30c-5p PTEN 0.78 0.00029 -0.45 0.00143 mirMAP -0.15 0 NA
26 hsa-miR-30d-3p PTEN 0.98 4.0E-5 -0.45 0.00143 MirTarget; miRNATAP -0.12 3.0E-5 NA
27 hsa-miR-30d-5p PTEN 0.68 0.00271 -0.45 0.00143 mirMAP -0.11 0.00029 NA
28 hsa-miR-30e-5p PTEN 1.24 0 -0.45 0.00143 mirMAP -0.16 0 NA
29 hsa-miR-32-5p PTEN 2.34 0 -0.45 0.00143 MirTarget; miRNATAP -0.15 0 24123284; 25647261; 23617834 In this study we determined the levels of the correlation between and the clinical significance of the expression of miR-32 and phosphatase and tensin homologue PTEN a tumor suppressor targeted by miR-32 in CRC; The levels of miR-32 and PTEN gene expression in 35 colorectal carcinoma samples 35 corresponding cancer-adjacent tissue samples 27 colorectal adenoma samples and 16 normal tissue samples were quantified using real-time quantitative reverse transcriptase-polymerase chain reaction; The relationship between the miR-32 and PTEN protein expression and clinicopathological factors was analyzed; Significant upregulation of miR-32 expression and reduction of PTEN were identified in CRC tissues; An inverse relationship between miR-32 and PTEN protein expression was identified; MiR-32 and PTEN expression were inversely correlated and miR-32 may be associated with the development of CRC;MiR 32 induces cell proliferation migration and invasion in hepatocellular carcinoma by targeting PTEN; Besides miRNA-32 down-regulates PTEN through binding to 3'-UTR of PTEN mRNA from luciferase reporter assay and the expression level of miR-32 could affect the proliferation migration and invasion of liver cancer cell lines via PTEN/Akt signaling pathway; Down-expression of PTEN could significantly attenuate the inhibitory effects of knockdown miR-32 on the proliferation migration and invasion of liver cancer cells suggesting that miR-32 could be a potential target for HCC treatment;MicroRNA 32 miR 32 regulates phosphatase and tensin homologue PTEN expression and promotes growth migration and invasion in colorectal carcinoma cells; In this study we identified the potential effects of miR-32 on some important biological properties of CRC cells and clarified the regulation of PTEN by miR-32; The 3'-untranslated region 3'-UTR of PTEN combined with miR-32 was verified by dual-luciferase reporter assay; Gain-of-function and loss-of-function studies showed that overexpression of miR-32 promoted SW480 cell proliferation migration and invasion reduced apoptosis and resulted in downregulation of PTEN at a posttranscriptional level; However miR-32 knock-down inhibited these processes in HCT-116 cells and enhanced the expression of PTEN protein; In addition we further identified PTEN as the functional downstream target of miR-32 by directly targeting the 3'-UTR of PTEN; Our results demonstrated that miR-32 was involved in tumorigenesis of CRC at least in part by suppression of PTEN
30 hsa-miR-362-3p PTEN 2.08 0 -0.45 0.00143 miRanda -0.12 0 NA
31 hsa-miR-363-3p PTEN 1.51 0.00021 -0.45 0.00143 MirTarget; miRNATAP -0.1 0 NA
32 hsa-miR-374a-5p PTEN 0.48 0.0043 -0.45 0.00143 MirTarget; mirMAP -0.15 0.00016 NA
33 hsa-miR-374b-5p PTEN 0.07 0.72267 -0.45 0.00143 MirTarget; mirMAP; miRNATAP -0.12 0.00158 NA
34 hsa-miR-421 PTEN 1.18 1.0E-5 -0.45 0.00143 miRanda -0.12 1.0E-5 NA
35 hsa-miR-425-5p PTEN 3.07 0 -0.45 0.00143 miRNATAP -0.14 0 25154996 An increase in miR-425 depended upon IL-1β-induced NF-kappaB activation.Repression of PTEN by miR-425 promoted gastric cancer cell proliferation
36 hsa-miR-454-3p PTEN 2.47 0 -0.45 0.00143 MirTarget; miRNATAP -0.14 0 26296312; 27261580 MicroRNA 454 functions as an oncogene by regulating PTEN in uveal melanoma; Furthermore we identified PTEN as a direct target of miR-454; Our data revealed that ectopic expression of PTEN restored the effects of miR-454 on cell proliferation and invasion in uveal melanoma cells;MiR 454 promotes the progression of human non small cell lung cancer and directly targets PTEN; At last the potential regulatory function of miR-454 on PTEN expression was confirmed; Further PTEN was confirmed as a direct target of miR-454 by using Luciferase Reporter Assay
37 hsa-miR-484 PTEN 1.82 0 -0.45 0.00143 miRNATAP -0.12 2.0E-5 NA
38 hsa-miR-532-5p PTEN 1.56 0 -0.45 0.00143 PITA; mirMAP; miRNATAP -0.14 0 NA
39 hsa-miR-590-5p PTEN 3.18 0 -0.45 0.00143 mirMAP -0.12 0 23803188 Targetscan predicted PDCD4 and PTEN as the potential target genes of miR-590-5p and miR-590-3p which was verified by luciferase reporter system and Western blotting
40 hsa-miR-7-1-3p PTEN 1.85 0 -0.45 0.00143 mirMAP -0.13 0 NA
41 hsa-miR-92a-3p PTEN 2.06 0 -0.45 0.00143 MirTarget; miRNATAP -0.18 0 26432332; 25515201; 24137349; 23546593; 23133552; 24026406 Downregulation of PTEN could mimic the same effects of miR-92a mimic in NSCLC cells and rescue the effects on NSCLC cells induced by miR-92a inhibitor; Taken together these findings suggested that miR-92a could promote growth metastasis and chemoresistance in NSCLC cells at least partially by targeting PTEN;MiR 92a Promotes Cell Metastasis of Colorectal Cancer Through PTEN Mediated PI3K/AKT Pathway; The expression of miR-92a PTEN and E-cadherin was analyzed by real-time PCR; In addition there was a negative correlation between levels of miR-92a and the PTEN gene p < 0.0001; The association of levels of miR-92a and PTEN with tumor cell migration in CRC was also confirmed in CRC cell models;MicroRNA miR-92 is overexpressed in a number of tumors and has been proven to negatively regulate a number of tumor suppressor genes including phosphatase and tensin homologue PTEN; PTEN protein expression was decreased in the SiHa cells that were transfected with the miR-92 mimic; The data indicated that miR-92 may increase the migration and invasion of SiHa cells partially through the downregulation of PTEN protein expression;Expression and significance of PTEN and miR 92 in hepatocellular carcinoma; Immunohistochemistry streptavidin-peroxidase SP and quantitative reverse transcriptase-polymerase chain reaction qRT‑PCR were used to detect the expression of PTEN and miR-92 in 15 cases of HCC and the corresponding paracancerous tissues; The correlation between PTEN and miR-92 was analyzed; Additionally the mRNA levels of PTEN and miR-92 showed a significantly negative correlation with each other r=-0.858 P<0.05; In conclusion PTEN and miR-92 have different roles in the development of HCC; The combined detection of PTEN and miR-92 may provide critical clinical evidence for the early diagnosis and prognosis of HCC;PTEN mRNA correlated inversely with miR-92a and members of the miR-17 and miR-130/301 families;The expression levels of miR-92a and phosphatase and tensin homologue PTEN were detected by qRT-PCR and western blot; In addition the regulation of PTEN by miR-92a was evaluated by qRT-PCR western blot and luciferase reporter assays; There was an inverse correlation between the levels of miR-92a and PTEN in CRC tissues; The overexpression of miR-92a in CRC cells decreased PTEN expression at the translational level and decreased PTEN-driven luciferase-reporter activity; Our results demonstrated that miR-92a induced EMT and regulated cell growth migration and invasion in the SW480 cells at least partially via suppression of PTEN expression
42 hsa-miR-92b-3p PTEN 1.2 0 -0.45 0.00143 MirTarget; miRNATAP -0.11 1.0E-5 24099768; 26878388; 24137349; 23546593 MiR 92b regulates the cell growth cisplatin chemosensitivity of A549 non small cell lung cancer cell line and target PTEN; Furthermore we found miR-92b could directly target PTEN a unique tumor suppressor gene which was downregulated in lung cancer tissues compared to the matched adjacent normal tissues;We revealed that patients exhibiting an upregulation of hsa-miR-92b and patients with deletions of PTEN did not tend to overlap and hsa-miR-92b and PTEN coordinately regulated the pathway of 'cell cycle' and so on;MicroRNA miR-92 is overexpressed in a number of tumors and has been proven to negatively regulate a number of tumor suppressor genes including phosphatase and tensin homologue PTEN; PTEN protein expression was decreased in the SiHa cells that were transfected with the miR-92 mimic; The data indicated that miR-92 may increase the migration and invasion of SiHa cells partially through the downregulation of PTEN protein expression;Expression and significance of PTEN and miR 92 in hepatocellular carcinoma; Immunohistochemistry streptavidin-peroxidase SP and quantitative reverse transcriptase-polymerase chain reaction qRT‑PCR were used to detect the expression of PTEN and miR-92 in 15 cases of HCC and the corresponding paracancerous tissues; The correlation between PTEN and miR-92 was analyzed; Additionally the mRNA levels of PTEN and miR-92 showed a significantly negative correlation with each other r=-0.858 P<0.05; In conclusion PTEN and miR-92 have different roles in the development of HCC; The combined detection of PTEN and miR-92 may provide critical clinical evidence for the early diagnosis and prognosis of HCC
43 hsa-miR-93-5p PTEN 3.04 0 -0.45 0.00143 miRNAWalker2 validate; miRTarBase; miRNATAP -0.13 0 25633810; 26243299; 22465665; 26087719 MicroRNA 93 activates c Met/PI3K/Akt pathway activity in hepatocellular carcinoma by directly inhibiting PTEN and CDKN1A; We confirmed that miR-93 directly bound with the 3' untranslated regions of the tumor-suppressor genes PTEN and CDKN1A respectivelyand inhibited their expression; We concluded that miR-93 stimulated cell proliferation migration and invasion through the oncogenic c-Met/PI3K/Akt pathway and also inhibited apoptosis by directly inhibiting PTEN and CDKN1A expression in human HCC;microRNA 93 promotes cell proliferation via targeting of PTEN in Osteosarcoma cells; An miRNA miR-93 was significantly up-regulated whereas phosphatase and tensin homologue PTEN expression was significantly down-regulated in all tested OS cells when compared with hMSCs; Ectopic expression of miR-93 decreased PTEN protein levels; Taking these observations together miR-93 can be seen to play a critical role in carcinogenesis through suppression of PTEN and may serve as a therapeutic target for the treatment of OS;Furthermore we found that miR-93 can directly target PTEN and participates in the regulation of the AKT signaling pathway; MiR-93 inversely correlates with PTEN expression in CDDP-resistant and sensitive human ovarian cancer tissues;Furthermore our study found berberine could inhibit miR-93 expression and function in ovarian cancer as shown by an increase of its target PTEN an important tumor suppressor in ovarian cancer; More importantly A2780 cells that were treated with PTEN siRNA had a survival pattern that is similar to cells with miR-93 overexpression
NumGOOverlapSizeP ValueAdj. P Value
1 CELL CYCLE 25 1316 7.59e-14 3.531e-10
2 CELL CYCLE PROCESS 20 1081 7.691e-11 1.789e-07
3 MITOTIC CELL CYCLE 17 766 1.758e-10 2.726e-07
4 ORGANELLE FISSION 14 496 4.268e-10 4.964e-07
5 MITOTIC NUCLEAR DIVISION 12 361 1.409e-09 1.311e-06
6 CELL DIVISION 12 460 2.112e-08 1.638e-05
7 CELL CYCLE PHASE TRANSITION 8 255 1.495e-06 0.0009939
8 CHROMOSOME ORGANIZATION 14 1009 2.847e-06 0.001656
9 NEGATIVE REGULATION OF CELL CYCLE PROCESS 7 214 5.392e-06 0.002787
10 EXIT FROM MITOSIS 3 12 6.735e-06 0.003134
11 REGULATION OF CELL CYCLE 13 949 7.869e-06 0.003329
12 ACTIVATION OF ANAPHASE PROMOTING COMPLEX ACTIVITY 3 15 1.383e-05 0.005364
13 DNA METABOLIC PROCESS 11 758 2.561e-05 0.009165
NumGOOverlapSizeP ValueAdj. P Value
NumGOOverlapSizeP ValueAdj. P Value
1 CHROMOSOME 14 880 5.652e-07 0.0003301
2 NUCLEAR CHROMOSOME 10 523 5.852e-06 0.001139
3 NUCLEAR CHROMATIN 8 291 3.985e-06 0.001139
4 CHROMATIN 9 441 1.068e-05 0.001248
5 NUCLEAR UBIQUITIN LIGASE COMPLEX 4 42 9.74e-06 0.001248
6 ANAPHASE PROMOTING COMPLEX 3 22 4.608e-05 0.004485

Over-represented Pathway

NumPathwayPathviewOverlapSizeP ValueAdj. P Value
1 Cell_cycle_hsa04110 6 124 2.81e-06 0.0001461
2 Cellular_senescence_hsa04218 5 160 0.0001604 0.00417
3 Oocyte_meiosis_hsa04114 4 124 0.000671 0.01163
4 Signaling_pathways_regulating_pluripotency_of_stem_cells_hsa04550 3 139 0.01005 0.1306
5 Hippo_signaling_pathway_hsa04390 3 154 0.01324 0.1377
6 p53_signaling_pathway_hsa04115 2 68 0.02005 0.1738
7 TGF_beta_signaling_pathway_hsa04350 2 84 0.0297 0.2207
8 Phosphatidylinositol_signaling_system_hsa04070 2 99 0.0401 0.2606
9 Sphingolipid_signaling_pathway_hsa04071 2 118 0.05491 0.2985
10 AMPK_signaling_pathway_hsa04152 2 121 0.0574 0.2985
11 FoxO_signaling_pathway_hsa04068 2 132 0.06687 0.3161
12 Wnt_signaling_pathway_hsa04310 2 146 0.0796 0.3373
13 mTOR_signaling_pathway_hsa04150 2 151 0.08431 0.3373
14 PI3K_Akt_signaling_pathway_hsa04151 3 352 0.1031 0.3828
15 cAMP_signaling_pathway_hsa04024 2 198 0.1323 0.4312
16 Focal_adhesion_hsa04510 2 199 0.1333 0.4312
17 Rap1_signaling_pathway_hsa04015 2 206 0.141 0.4312
18 Cytokine_cytokine_receptor_interaction_hsa04060 2 270 0.2139 0.5298
19 MAPK_signaling_pathway_hsa04010 2 295 0.2434 0.5754

lncRNA-mediated sponge

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Num lncRNA miRNAs           miRNAs count     Gene Sponge regulatory network lncRNA log2FC lncRNA pvalue Gene log2FC Gene pvalue lncRNA-gene Pearson correlation
1 RP1-122P22.2 hsa-miR-103a-3p;hsa-miR-107;hsa-miR-130b-3p;hsa-miR-148a-3p;hsa-miR-148b-3p;hsa-miR-16-2-3p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-25-3p;hsa-miR-532-5p 10 PTEN Sponge network -0.972 0.04242 -0.453 0.00143 0.316
2 RP11-1223D19.1 hsa-miR-103a-3p;hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-107;hsa-miR-130b-3p;hsa-miR-148a-3p;hsa-miR-148b-3p;hsa-miR-17-5p;hsa-miR-181c-5p;hsa-miR-181d-5p;hsa-miR-186-5p;hsa-miR-18a-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-20a-5p;hsa-miR-25-3p;hsa-miR-301a-3p;hsa-miR-484;hsa-miR-532-5p;hsa-miR-93-5p 20 PTEN Sponge network -1.23 0.05444 -0.453 0.00143 0.279
3 RP11-399O19.9 hsa-miR-103a-3p;hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-107;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-2-3p;hsa-miR-17-5p;hsa-miR-181c-5p;hsa-miR-181d-5p;hsa-miR-186-5p;hsa-miR-188-5p;hsa-miR-18a-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-20a-5p;hsa-miR-25-3p;hsa-miR-301a-3p;hsa-miR-363-3p;hsa-miR-7-1-3p;hsa-miR-93-5p 21 PTEN Sponge network -0.911 0.02612 -0.453 0.00143 0.274

Quest ID: 9efe6989def5ffe899174bb3c70a14c7