This regulatory network was inferred from the input dataset. The miRNAs and mRNAs are
presented as round and rectangle nodes respectively. The numerical value popped up upon mouse over the gene node is the log2 transformed fold-change of the gene expression between the two groups. All of the nodes are clickable, and the detailed information of the miRNAs/mRNAs and related cancer pathway will be displayed in another window. The edges between nodes are supported by both interactions (predicted or experimentally verified) and correlations learnt from cancer dataset. The numerical value popped up upon mouse over the edge is the correlation beat value (effect size) between the two nodes. The experimental evidences of the edges reported in previous cancer studies are highlighted by red/orange color. All of these information can be accessed by the "mouse-over" action. This network shows a full map of the miRNA-mRNA regulation of the input gene list(s), and the hub miRNAs (with the high network degree/betweenness centrality) would be the potential cancer drivers or tumor suppressors. The full result table can be accessed in the "Regulations" tab.
"miRNACancerMAP" is also a network visualization tool for users to draw their regulatory network by personal customization. Users can set the complexity of the network by limiting the number of nodes or edges. And the color of the nodes can be defined by different categories of the mRNAs and miRNAs, such as Gene-Ontology, pathway, and expression status. Users can also select to use network degree or network betweenness centrality to define the node size. And edges can be black or colored by the correlation. Purple edge means negative correlation (mostly found between miRNA and mRNA), and blue edge means positive correlation (found in PPI or miRNA-miRNA sponge effect). We can also add the protein-protein interactions (PPI) into the network. This result will show the cluster of genes regulated by some specific miRNAs. Additionally, miRNA-miRNA edges can be added by the "miRNA sponge" button, presenting some clusters of miRNAs that have the interactions via sponge effect.
Num | microRNA | Gene | miRNA log2FC | miRNA pvalue | Gene log2FC | Gene pvalue | Interaction | Correlation beta | Correlation P-value | PMID | Reported in cancer studies |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | hsa-miR-454-3p | ACSL1 | 1.4 | 0.00366 | -0.26 | 0.66804 | MirTarget | -0.21 | 0.00407 | NA | |
2 | hsa-miR-454-3p | ACSL4 | 1.4 | 0.00366 | -0.89 | 0.13062 | MirTarget; miRNATAP | -0.14 | 0.04315 | NA | |
3 | hsa-miR-454-3p | ACVR1 | 1.4 | 0.00366 | -0.76 | 0.04389 | MirTarget; miRNATAP | -0.12 | 0.00599 | NA | |
4 | hsa-miR-454-3p | AKAP11 | 1.4 | 0.00366 | -0.61 | 0.12508 | miRNATAP | -0.12 | 0.00898 | NA | |
5 | hsa-miR-454-3p | AMPD3 | 1.4 | 0.00366 | 1.34 | 0.01947 | MirTarget; miRNATAP | -0.28 | 3.0E-5 | NA | |
6 | hsa-miR-454-3p | ANKRD12 | 1.4 | 0.00366 | -0.49 | 0.18892 | MirTarget; miRNATAP | -0.11 | 0.01667 | NA | |
7 | hsa-miR-106a-5p | APCDD1 | 3.99 | 0 | -2.17 | 0.00459 | MirTarget | -0.15 | 0.00407 | NA | |
8 | hsa-miR-130b-3p | APCDD1 | 3.92 | 0 | -2.17 | 0.00459 | MirTarget | -0.18 | 0.0162 | NA | |
9 | hsa-miR-20b-5p | APCDD1 | 4.57 | 5.0E-5 | -2.17 | 0.00459 | MirTarget | -0.1 | 0.00797 | NA | |
10 | hsa-miR-330-5p | APCDD1 | 2.25 | 0.00028 | -2.17 | 0.00459 | miRanda | -0.14 | 0.04065 | NA | |
11 | hsa-miR-93-5p | APCDD1 | 2.66 | 0 | -2.17 | 0.00459 | MirTarget | -0.23 | 0.01143 | NA | |
12 | hsa-miR-454-3p | AR | 1.4 | 0.00366 | -4.57 | 0.00169 | mirMAP; miRNATAP | -0.47 | 0.00625 | NA | |
13 | hsa-miR-454-3p | ARAP2 | 1.4 | 0.00366 | 1.71 | 0.00222 | MirTarget | -0.2 | 0.00207 | NA | |
14 | hsa-miR-454-3p | ARHGAP21 | 1.4 | 0.00366 | -0.14 | 0.76187 | MirTarget; miRNATAP | -0.14 | 0.01042 | NA | |
15 | hsa-miR-454-3p | ARHGEF12 | 1.4 | 0.00366 | -0.4 | 0.28538 | MirTarget; miRNATAP | -0.16 | 0.0003 | NA | |
16 | hsa-miR-454-3p | ASPA | 1.4 | 0.00366 | -5.53 | 0 | mirMAP | -0.32 | 0.02559 | NA | |
17 | hsa-miR-454-3p | ASXL2 | 1.4 | 0.00366 | 0.95 | 0.22717 | MirTarget; miRNATAP | -0.2 | 0.03105 | NA | |
18 | hsa-miR-454-3p | ATP6V1B2 | 1.4 | 0.00366 | 0.23 | 0.47152 | MirTarget; miRNATAP | -0.1 | 0.00585 | NA | |
19 | hsa-miR-454-3p | ATXN1 | 1.4 | 0.00366 | -1.43 | 0.00387 | miRNATAP | -0.17 | 0.00303 | NA | |
20 | hsa-miR-454-3p | BBX | 1.4 | 0.00366 | -0.18 | 0.63612 | MirTarget; miRNATAP | -0.1 | 0.02182 | NA | |
21 | hsa-miR-454-3p | BCL9L | 1.4 | 0.00366 | -0.12 | 0.78985 | mirMAP | -0.14 | 0.00577 | NA | |
22 | hsa-miR-454-3p | BRWD3 | 1.4 | 0.00366 | 2.22 | 0.00115 | MirTarget; miRNATAP | -0.2 | 0.01287 | NA | |
23 | hsa-miR-454-3p | BTBD10 | 1.4 | 0.00366 | 0.43 | 0.25557 | MirTarget | -0.18 | 3.0E-5 | NA | |
24 | hsa-miR-454-3p | BTG1 | 1.4 | 0.00366 | -0.9 | 0.02841 | miRNATAP | -0.11 | 0.02771 | NA | |
25 | hsa-miR-454-3p | C15orf52 | 1.4 | 0.00366 | -1.2 | 0.18499 | mirMAP | -0.36 | 0.00077 | NA | |
26 | hsa-miR-454-3p | C1S | 1.4 | 0.00366 | -2.07 | 0.01886 | MirTarget | -0.25 | 0.01612 | NA | |
27 | hsa-miR-454-3p | CD109 | 1.4 | 0.00366 | -0.13 | 0.90668 | mirMAP | -0.3 | 0.02391 | NA | |
28 | hsa-miR-454-3p | CD69 | 1.4 | 0.00366 | -0.72 | 0.42333 | miRNATAP | -0.25 | 0.01834 | NA | |
29 | hsa-miR-454-3p | CDH11 | 1.4 | 0.00366 | -2.72 | 0.00843 | mirMAP | -0.48 | 7.0E-5 | NA | |
30 | hsa-miR-454-3p | CHD9 | 1.4 | 0.00366 | -0.3 | 0.4758 | miRNATAP | -0.17 | 0.00054 | NA | |
31 | hsa-miR-454-3p | CLIP1 | 1.4 | 0.00366 | 0.26 | 0.56626 | MirTarget; miRNATAP | -0.21 | 7.0E-5 | NA | |
32 | hsa-miR-454-3p | CPEB2 | 1.4 | 0.00366 | -0.48 | 0.40022 | miRNATAP | -0.16 | 0.01428 | NA | |
33 | hsa-miR-454-3p | CPEB4 | 1.4 | 0.00366 | -0.65 | 0.23946 | miRNATAP | -0.16 | 0.01341 | NA | |
34 | hsa-miR-454-3p | CRISPLD1 | 1.4 | 0.00366 | -3 | 0.03284 | MirTarget | -0.4 | 0.01665 | NA | |
35 | hsa-miR-454-3p | CSF1 | 1.4 | 0.00366 | -1.1 | 0.12732 | MirTarget; miRNATAP | -0.2 | 0.02018 | NA | |
36 | hsa-miR-454-3p | CTSK | 1.4 | 0.00366 | -3.32 | 1.0E-5 | MirTarget | -0.47 | 0 | NA | |
37 | hsa-miR-454-3p | CYLD | 1.4 | 0.00366 | -0.05 | 0.90145 | miRNATAP | -0.12 | 0.0045 | 25824771 | MiR 454 prompts cell proliferation of human colorectal cancer cells by repressing CYLD expression; Bioinformatics analysis further revealed cylindromatosis CYLD a putative tumor suppressor as a potential target of miR-454; Data from luciferase reporter assays showed that miR-454 directly binds to the 3'-untranslated region 3'-UTR of CYLD mRNA and repressed expression at both transcriptional and translational levels; In sum our data provide compelling evidence that miR-454 functions as an onco-miRNA playing a crucial role in the promoting cell proliferation in CRC and its oncogenic effect is mediated chiefly through direct suppression of CYLD expression |
38 | hsa-miR-454-3p | CYP4F3 | 1.4 | 0.00366 | 5.4 | 0.001 | mirMAP | -0.39 | 0.04343 | NA | |
39 | hsa-miR-454-3p | DAAM1 | 1.4 | 0.00366 | 0.28 | 0.67526 | MirTarget; miRNATAP | -0.24 | 0.00186 | NA | |
40 | hsa-miR-454-3p | DLC1 | 1.4 | 0.00366 | -3.66 | 0 | miRNATAP | -0.3 | 0.00062 | NA | |
41 | hsa-miR-454-3p | DNM3 | 1.4 | 0.00366 | -2.57 | 0.00056 | mirMAP | -0.27 | 0.00193 | NA | |
42 | hsa-miR-454-3p | DYRK2 | 1.4 | 0.00366 | 0.06 | 0.87911 | mirMAP | -0.11 | 0.02274 | NA | |
43 | hsa-miR-454-3p | EEA1 | 1.4 | 0.00366 | -0.24 | 0.59857 | mirMAP | -0.23 | 2.0E-5 | NA | |
44 | hsa-miR-454-3p | ELK3 | 1.4 | 0.00366 | -0.79 | 0.2934 | MirTarget; miRNATAP | -0.42 | 0 | NA | |
45 | hsa-miR-454-3p | ENAH | 1.4 | 0.00366 | -0.27 | 0.60264 | miRNATAP | -0.13 | 0.03879 | NA | |
46 | hsa-miR-454-3p | ENDOD1 | 1.4 | 0.00366 | -1.15 | 0.01857 | MirTarget | -0.23 | 4.0E-5 | NA | |
47 | hsa-miR-454-3p | ESR1 | 1.4 | 0.00366 | -4.87 | 9.0E-5 | miRNATAP | -0.52 | 0.00045 | NA | |
48 | hsa-miR-454-3p | EVI5 | 1.4 | 0.00366 | -0.95 | 0.00393 | mirMAP | -0.1 | 0.00889 | NA | |
49 | hsa-miR-454-3p | FAM155A | 1.4 | 0.00366 | -3.09 | 0.00443 | MirTarget | -0.36 | 0.00573 | NA | |
50 | hsa-miR-454-3p | FAM179B | 1.4 | 0.00366 | -0.56 | 0.15244 | miRNATAP | -0.12 | 0.0124 | NA | |
51 | hsa-miR-454-3p | FAM46B | 1.4 | 0.00366 | 0.42 | 0.68311 | MirTarget; miRNATAP | -0.29 | 0.01569 | NA | |
52 | hsa-miR-454-3p | FIBIN | 1.4 | 0.00366 | -3.85 | 0.00528 | MirTarget | -0.66 | 4.0E-5 | NA | |
53 | hsa-miR-454-3p | FMN1 | 1.4 | 0.00366 | 1.87 | 0.076 | mirMAP | -0.29 | 0.02163 | NA | |
54 | hsa-miR-454-3p | FOSL1 | 1.4 | 0.00366 | 2.1 | 0.0498 | MirTarget | -0.34 | 0.00737 | NA | |
55 | hsa-miR-454-3p | FRMD6 | 1.4 | 0.00366 | -1.61 | 0.08207 | MirTarget | -0.41 | 0.00018 | NA | |
56 | hsa-miR-454-3p | FRZB | 1.4 | 0.00366 | -4.07 | 5.0E-5 | MirTarget | -0.25 | 0.0365 | NA | |
57 | hsa-miR-454-3p | FZD6 | 1.4 | 0.00366 | 1.58 | 0.00919 | MirTarget | -0.15 | 0.04098 | NA | |
58 | hsa-miR-454-3p | G0S2 | 1.4 | 0.00366 | 0.4 | 0.71817 | MirTarget | -0.33 | 0.01043 | NA | |
59 | hsa-miR-454-3p | GADD45A | 1.4 | 0.00366 | -0.57 | 0.35686 | MirTarget; miRNATAP | -0.31 | 2.0E-5 | NA | |
60 | hsa-miR-454-3p | GBP4 | 1.4 | 0.00366 | 0.55 | 0.60015 | mirMAP | -0.28 | 0.02105 | NA | |
61 | hsa-miR-454-3p | GCLM | 1.4 | 0.00366 | 1.75 | 0.00401 | mirMAP | -0.17 | 0.01881 | NA | |
62 | hsa-miR-454-3p | GFOD1 | 1.4 | 0.00366 | 0.92 | 0.20897 | mirMAP | -0.19 | 0.02487 | NA | |
63 | hsa-miR-454-3p | GJA1 | 1.4 | 0.00366 | -1.39 | 0.17815 | MirTarget; miRNATAP | -0.29 | 0.01745 | NA | |
64 | hsa-miR-454-3p | GPR157 | 1.4 | 0.00366 | 2.04 | 0.0467 | mirMAP | -0.28 | 0.02172 | NA | |
65 | hsa-miR-454-3p | GPRC5A | 1.4 | 0.00366 | 1.52 | 0.16803 | mirMAP | -0.28 | 0.03169 | NA | |
66 | hsa-miR-454-3p | HECW2 | 1.4 | 0.00366 | -0.59 | 0.4122 | MirTarget | -0.3 | 0.00041 | NA | |
67 | hsa-miR-454-3p | HEG1 | 1.4 | 0.00366 | -1.11 | 0.15703 | miRNATAP | -0.38 | 3.0E-5 | NA | |
68 | hsa-miR-454-3p | HERC3 | 1.4 | 0.00366 | -0.31 | 0.56561 | MirTarget | -0.17 | 0.00587 | NA | |
69 | hsa-miR-454-3p | HES2 | 1.4 | 0.00366 | 6.53 | 1.0E-5 | mirMAP | -0.46 | 0.00885 | NA | |
70 | hsa-miR-454-3p | HIPK3 | 1.4 | 0.00366 | -0.3 | 0.74415 | MirTarget | -0.27 | 0.01549 | NA | |
71 | hsa-miR-454-3p | HIVEP2 | 1.4 | 0.00366 | 0.14 | 0.72176 | miRNATAP | -0.14 | 0.00237 | NA | |
72 | hsa-miR-454-3p | HRH1 | 1.4 | 0.00366 | -0.68 | 0.33264 | mirMAP | -0.25 | 0.00253 | NA | |
73 | hsa-miR-454-3p | IGF1 | 1.4 | 0.00366 | -4.48 | 0.00149 | MirTarget | -0.4 | 0.01817 | NA | |
74 | hsa-miR-454-3p | IL1RAP | 1.4 | 0.00366 | 1.81 | 0.02672 | MirTarget | -0.21 | 0.02802 | NA | |
75 | hsa-miR-454-3p | ITGA2 | 1.4 | 0.00366 | 2.49 | 0.01604 | mirMAP | -0.27 | 0.02766 | NA | |
76 | hsa-miR-454-3p | ITGA8 | 1.4 | 0.00366 | -4.42 | 0.00157 | mirMAP | -0.58 | 0.00047 | NA | |
77 | hsa-miR-454-3p | ITPR1 | 1.4 | 0.00366 | -3.7 | 0 | MirTarget; miRNATAP | -0.37 | 0 | NA | |
78 | hsa-miR-454-3p | JAM2 | 1.4 | 0.00366 | -5.56 | 0 | miRNATAP | -0.38 | 0.00044 | NA | |
79 | hsa-miR-454-3p | KCTD10 | 1.4 | 0.00366 | -1.32 | 0 | MirTarget | -0.13 | 4.0E-5 | NA | |
80 | hsa-miR-454-3p | KIAA1462 | 1.4 | 0.00366 | -4.22 | 0 | MirTarget | -0.23 | 0.00673 | NA | |
81 | hsa-miR-454-3p | KLF3 | 1.4 | 0.00366 | 0.06 | 0.86707 | miRNATAP | -0.13 | 0.00241 | NA | |
82 | hsa-miR-454-3p | KLF7 | 1.4 | 0.00366 | 0.14 | 0.86538 | MirTarget; miRNATAP | -0.23 | 0.02034 | NA | |
83 | hsa-miR-454-3p | KLHL20 | 1.4 | 0.00366 | -0.29 | 0.43362 | MirTarget; miRNATAP | -0.16 | 0.00028 | NA | |
84 | hsa-miR-454-3p | LDLR | 1.4 | 0.00366 | 0.07 | 0.90897 | miRNATAP | -0.18 | 0.01661 | NA | |
85 | hsa-miR-454-3p | LIPA | 1.4 | 0.00366 | -0.18 | 0.71748 | MirTarget | -0.12 | 0.04269 | NA | |
86 | hsa-miR-454-3p | LNPEP | 1.4 | 0.00366 | 1.08 | 0.04117 | MirTarget; miRNATAP | -0.13 | 0.03362 | NA | |
87 | hsa-miR-454-3p | LPP | 1.4 | 0.00366 | -1.15 | 0.02938 | mirMAP | -0.19 | 0.00183 | NA | |
88 | hsa-miR-454-3p | LRCH2 | 1.4 | 0.00366 | -5.17 | 0 | MirTarget; miRNATAP | -0.44 | 0.00017 | NA | |
89 | hsa-miR-454-3p | MAFB | 1.4 | 0.00366 | 0.68 | 0.42819 | miRNATAP | -0.26 | 0.00981 | NA | |
90 | hsa-miR-454-3p | MAP4 | 1.4 | 0.00366 | -0.73 | 0.032 | MirTarget | -0.1 | 0.01022 | NA | |
91 | hsa-miR-454-3p | MAPK10 | 1.4 | 0.00366 | -4.03 | 0.00046 | miRNATAP | -0.57 | 2.0E-5 | NA | |
92 | hsa-miR-454-3p | MBNL3 | 1.4 | 0.00366 | 1.26 | 0.12966 | MirTarget; mirMAP; miRNATAP | -0.21 | 0.02942 | NA | |
93 | hsa-miR-454-3p | MCC | 1.4 | 0.00366 | -0.68 | 0.46777 | MirTarget | -0.32 | 0.00382 | NA | |
94 | hsa-miR-454-3p | MDFIC | 1.4 | 0.00366 | -1.36 | 0.0449 | MirTarget; miRNATAP | -0.2 | 0.01345 | NA | |
95 | hsa-miR-454-3p | MEOX2 | 1.4 | 0.00366 | -6.19 | 0 | MirTarget; miRNATAP | -0.34 | 0.01532 | NA | |
96 | hsa-miR-454-3p | MID1IP1 | 1.4 | 0.00366 | 0.66 | 0.10505 | miRNATAP | -0.12 | 0.01561 | NA | |
97 | hsa-miR-454-3p | MMP16 | 1.4 | 0.00366 | -2.72 | 0.00811 | mirMAP | -0.32 | 0.00815 | NA | |
98 | hsa-miR-454-3p | MPPED2 | 1.4 | 0.00366 | -2.45 | 0.15823 | MirTarget | -0.6 | 0.00333 | NA | |
99 | hsa-miR-454-3p | MUC20 | 1.4 | 0.00366 | 1.73 | 0.20488 | mirMAP | -0.34 | 0.03626 | NA | |
100 | hsa-miR-454-3p | NAP1L3 | 1.4 | 0.00366 | -5.22 | 0 | MirTarget | -0.5 | 1.0E-5 | NA | |
101 | hsa-miR-454-3p | NAV1 | 1.4 | 0.00366 | 0.37 | 0.59295 | miRNATAP | -0.31 | 0.00012 | NA | |
102 | hsa-miR-454-3p | NFIA | 1.4 | 0.00366 | -0.82 | 0.18121 | miRNATAP | -0.22 | 0.00242 | NA | |
103 | hsa-miR-454-3p | NFIC | 1.4 | 0.00366 | -0.58 | 0.41726 | miRNATAP | -0.17 | 0.04248 | NA | |
104 | hsa-miR-454-3p | NHLH2 | 1.4 | 0.00366 | 2.73 | 0.13264 | MirTarget; miRNATAP | -0.55 | 0.01024 | NA | |
105 | hsa-miR-454-3p | NOX4 | 1.4 | 0.00366 | -2.45 | 0.00259 | MirTarget | -0.25 | 0.00813 | NA | |
106 | hsa-miR-454-3p | NPAT | 1.4 | 0.00366 | 0.09 | 0.81886 | MirTarget; miRNATAP | -0.12 | 0.00874 | NA | |
107 | hsa-miR-454-3p | PCDHB4 | 1.4 | 0.00366 | -4.44 | 0 | MirTarget | -0.41 | 0.00019 | NA | |
108 | hsa-miR-454-3p | PDCD1LG2 | 1.4 | 0.00366 | -0.81 | 0.39863 | MirTarget | -0.35 | 0.00234 | NA | |
109 | hsa-miR-454-3p | PDGFRA | 1.4 | 0.00366 | -4.32 | 1.0E-5 | MirTarget; miRNATAP | -0.46 | 8.0E-5 | NA | |
110 | hsa-miR-454-3p | PGM2L1 | 1.4 | 0.00366 | -1.68 | 0.03208 | MirTarget; miRNATAP | -0.2 | 0.02728 | NA | |
111 | hsa-miR-454-3p | PGR | 1.4 | 0.00366 | -7.62 | 0 | mirMAP | -0.66 | 0.00018 | NA | |
112 | hsa-miR-454-3p | PLCB1 | 1.4 | 0.00366 | -1.81 | 0.07239 | miRNATAP | -0.3 | 0.01148 | NA | |
113 | hsa-miR-454-3p | PMEPA1 | 1.4 | 0.00366 | -0.44 | 0.56222 | MirTarget; miRNATAP | -0.22 | 0.0153 | NA | |
114 | hsa-miR-454-3p | PPP1R12B | 1.4 | 0.00366 | -4.65 | 0 | mirMAP | -0.37 | 1.0E-5 | NA | |
115 | hsa-miR-454-3p | PRKG1 | 1.4 | 0.00366 | -4.14 | 0.00035 | miRNATAP | -0.54 | 9.0E-5 | NA | |
116 | hsa-miR-454-3p | PSD | 1.4 | 0.00366 | -5.74 | 0 | miRNATAP | -0.27 | 0.00711 | NA | |
117 | hsa-miR-454-3p | PTGFRN | 1.4 | 0.00366 | 0.01 | 0.98805 | miRNATAP | -0.13 | 0.01288 | NA | |
118 | hsa-miR-454-3p | PXK | 1.4 | 0.00366 | -1.19 | 0.05304 | MirTarget | -0.17 | 0.02128 | NA | |
119 | hsa-miR-454-3p | RALGPS2 | 1.4 | 0.00366 | 1.31 | 0.01845 | MirTarget | -0.2 | 0.00201 | NA | |
120 | hsa-miR-454-3p | RAP2C | 1.4 | 0.00366 | -0.96 | 0.01088 | MirTarget; miRNATAP | -0.18 | 3.0E-5 | NA | |
121 | hsa-miR-454-3p | RAPGEF4 | 1.4 | 0.00366 | -2.71 | 0.0001 | MirTarget; miRNATAP | -0.18 | 0.03366 | NA | |
122 | hsa-miR-454-3p | RARB | 1.4 | 0.00366 | -1.23 | 0.24963 | miRNATAP | -0.51 | 5.0E-5 | NA | |
123 | hsa-miR-454-3p | RASL12 | 1.4 | 0.00366 | -5.24 | 0 | MirTarget | -0.31 | 0.00122 | NA | |
124 | hsa-miR-454-3p | RASSF6 | 1.4 | 0.00366 | 4.23 | 0.00014 | mirMAP | -0.27 | 0.03868 | NA | |
125 | hsa-miR-454-3p | RC3H2 | 1.4 | 0.00366 | 0.73 | 0.09436 | mirMAP | -0.1 | 0.0489 | NA | |
126 | hsa-miR-454-3p | RNF11 | 1.4 | 0.00366 | -0.85 | 0.01247 | miRNATAP | -0.14 | 0.00051 | NA | |
127 | hsa-miR-454-3p | ROBO1 | 1.4 | 0.00366 | 0.25 | 0.74813 | miRNATAP | -0.25 | 0.00697 | NA | |
128 | hsa-miR-454-3p | ROBO2 | 1.4 | 0.00366 | -1.5 | 0.3479 | miRNATAP | -0.5 | 0.00798 | NA | |
129 | hsa-miR-454-3p | RUNX1T1 | 1.4 | 0.00366 | -4.61 | 4.0E-5 | miRNATAP | -0.54 | 5.0E-5 | NA | |
130 | hsa-miR-454-3p | RUNX2 | 1.4 | 0.00366 | 0.93 | 0.19285 | miRNATAP | -0.3 | 0.00038 | NA | |
131 | hsa-miR-454-3p | S1PR1 | 1.4 | 0.00366 | -4.01 | 0 | MirTarget; miRNATAP | -0.28 | 0.00027 | NA | |
132 | hsa-miR-454-3p | SAMHD1 | 1.4 | 0.00366 | 1.22 | 0.08415 | mirMAP | -0.17 | 0.04153 | NA | |
133 | hsa-miR-454-3p | SASH1 | 1.4 | 0.00366 | -1.01 | 0.06247 | MirTarget; miRNATAP | -0.15 | 0.01615 | NA | |
134 | hsa-miR-454-3p | SBF2 | 1.4 | 0.00366 | -0.78 | 0.06145 | MirTarget | -0.14 | 0.00328 | NA | |
135 | hsa-miR-454-3p | SCN3A | 1.4 | 0.00366 | -3.02 | 0.0067 | MirTarget | -0.3 | 0.0227 | NA | |
136 | hsa-miR-454-3p | SESN3 | 1.4 | 0.00366 | -0.38 | 0.69604 | mirMAP | -0.3 | 0.00906 | NA | |
137 | hsa-miR-454-3p | SETD7 | 1.4 | 0.00366 | -1.43 | 0.00158 | miRNATAP | -0.11 | 0.0386 | NA | |
138 | hsa-miR-454-3p | SH3D19 | 1.4 | 0.00366 | -1.17 | 0.00804 | MirTarget; miRNATAP | -0.22 | 2.0E-5 | NA | |
139 | hsa-miR-454-3p | SHROOM4 | 1.4 | 0.00366 | -2.05 | 0.01488 | mirMAP | -0.29 | 0.00335 | NA | |
140 | hsa-miR-454-3p | SLC24A3 | 1.4 | 0.00366 | -4.25 | 0.00045 | MirTarget; miRNATAP | -0.46 | 0.00125 | NA | |
141 | hsa-miR-454-3p | SLC35D1 | 1.4 | 0.00366 | 0.16 | 0.71932 | MirTarget | -0.17 | 0.00137 | NA | |
142 | hsa-miR-454-3p | SLC8A1 | 1.4 | 0.00366 | -4.53 | 0 | MirTarget | -0.35 | 0.00027 | NA | |
143 | hsa-miR-454-3p | SLIT3 | 1.4 | 0.00366 | -4.87 | 1.0E-5 | mirMAP | -0.38 | 0.00345 | NA | |
144 | hsa-miR-454-3p | SLMAP | 1.4 | 0.00366 | -1.88 | 0 | MirTarget | -0.19 | 1.0E-5 | NA | |
145 | hsa-miR-454-3p | SMOC2 | 1.4 | 0.00366 | -6.42 | 0 | miRNATAP | -0.33 | 0.00948 | NA | |
146 | hsa-miR-454-3p | SNX30 | 1.4 | 0.00366 | 0.08 | 0.84819 | mirMAP | -0.13 | 0.01105 | NA | |
147 | hsa-miR-454-3p | SNX31 | 1.4 | 0.00366 | 0.34 | 0.85342 | MirTarget | -0.9 | 3.0E-5 | NA | |
148 | hsa-miR-454-3p | SOS2 | 1.4 | 0.00366 | -0.27 | 0.49693 | miRNATAP | -0.1 | 0.02684 | NA | |
149 | hsa-miR-454-3p | SPEN | 1.4 | 0.00366 | 0.27 | 0.46575 | MirTarget; miRNATAP | -0.1 | 0.01681 | NA | |
150 | hsa-miR-454-3p | SPOCK1 | 1.4 | 0.00366 | -3.14 | 0.0073 | MirTarget | -0.45 | 0.00125 | NA |
Num | GO | Overlap | Size | P Value | Adj. P Value |
---|---|---|---|---|---|
1 | POSITIVE REGULATION OF BIOSYNTHETIC PROCESS | 40 | 1805 | 1.274e-07 | 0.0005928 |
2 | POSITIVE REGULATION OF MOLECULAR FUNCTION | 38 | 1791 | 8.377e-07 | 0.001008 |
3 | ORGAN MORPHOGENESIS | 24 | 841 | 8.667e-07 | 0.001008 |
4 | NEGATIVE REGULATION OF CELL PROLIFERATION | 21 | 643 | 5.232e-07 | 0.001008 |
5 | SKELETAL SYSTEM DEVELOPMENT | 17 | 455 | 1.113e-06 | 0.001035 |
6 | EMBRYONIC ORGAN MORPHOGENESIS | 13 | 279 | 1.978e-06 | 0.001534 |
7 | DEVELOPMENTAL GROWTH | 14 | 333 | 2.647e-06 | 0.00176 |
8 | TISSUE DEVELOPMENT | 33 | 1518 | 3.033e-06 | 0.001764 |
9 | TUBE DEVELOPMENT | 18 | 552 | 3.649e-06 | 0.001886 |
10 | EMBRYO DEVELOPMENT | 23 | 894 | 8.325e-06 | 0.002421 |
11 | POSITIVE REGULATION OF CATALYTIC ACTIVITY | 32 | 1518 | 8.288e-06 | 0.002421 |
12 | GROWTH | 15 | 410 | 6.292e-06 | 0.002421 |
13 | CARDIAC MUSCLE TISSUE DEVELOPMENT | 9 | 140 | 6.041e-06 | 0.002421 |
14 | POSITIVE REGULATION OF CELL DIFFERENTIATION | 22 | 823 | 7.314e-06 | 0.002421 |
15 | REGULATION OF RAS PROTEIN SIGNAL TRANSDUCTION | 10 | 184 | 8.168e-06 | 0.002421 |
16 | CENTRAL NERVOUS SYSTEM DEVELOPMENT | 23 | 872 | 5.55e-06 | 0.002421 |
17 | REGULATION OF MULTICELLULAR ORGANISMAL DEVELOPMENT | 34 | 1672 | 8.906e-06 | 0.002438 |
18 | MUSCLE TISSUE DEVELOPMENT | 12 | 275 | 9.629e-06 | 0.002489 |
19 | EMBRYO DEVELOPMENT ENDING IN BIRTH OR EGG HATCHING | 17 | 554 | 1.514e-05 | 0.003457 |
20 | BONE DEVELOPMENT | 9 | 156 | 1.45e-05 | 0.003457 |
21 | REGULATION OF CELL DIFFERENTIATION | 31 | 1492 | 1.56e-05 | 0.003457 |
22 | POSITIVE REGULATION OF TRANSCRIPTION FROM RNA POLYMERASE II PROMOTER | 24 | 1004 | 1.762e-05 | 0.003727 |
23 | POSITIVE REGULATION OF GENE EXPRESSION | 34 | 1733 | 1.89e-05 | 0.003824 |
24 | EPITHELIUM DEVELOPMENT | 23 | 945 | 2.018e-05 | 0.003913 |
25 | REGULATION OF ANATOMICAL STRUCTURE MORPHOGENESIS | 24 | 1021 | 2.314e-05 | 0.004306 |
26 | EMBRYONIC ORGAN DEVELOPMENT | 14 | 406 | 2.494e-05 | 0.004463 |
27 | POSITIVE REGULATION OF PHOSPHATE METABOLIC PROCESS | 24 | 1036 | 2.925e-05 | 0.004775 |
28 | POSITIVE REGULATION OF PHOSPHORUS METABOLIC PROCESS | 24 | 1036 | 2.925e-05 | 0.004775 |
29 | CARDIOCYTE DIFFERENTIATION | 7 | 96 | 2.976e-05 | 0.004775 |
30 | HEAD DEVELOPMENT | 19 | 709 | 3.09e-05 | 0.004793 |
31 | NEUROGENESIS | 29 | 1402 | 3.312e-05 | 0.004972 |
32 | TISSUE MORPHOGENESIS | 16 | 533 | 3.546e-05 | 0.005156 |
33 | ORGAN GROWTH | 6 | 68 | 3.811e-05 | 0.005373 |
34 | EMBRYONIC MORPHOGENESIS | 16 | 539 | 4.053e-05 | 0.005547 |
35 | NEGATIVE REGULATION OF RESPONSE TO STIMULUS | 28 | 1360 | 5.001e-05 | 0.006123 |
36 | TUBE MORPHOGENESIS | 12 | 323 | 4.701e-05 | 0.006123 |
37 | POSITIVE REGULATION OF DEVELOPMENTAL PROCESS | 25 | 1142 | 4.982e-05 | 0.006123 |
38 | DEVELOPMENTAL GROWTH INVOLVED IN MORPHOGENESIS | 7 | 104 | 4.986e-05 | 0.006123 |
39 | REGULATION OF SMALL GTPASE MEDIATED SIGNAL TRANSDUCTION | 11 | 278 | 5.562e-05 | 0.00647 |
40 | CELLULAR RESPONSE TO ENDOGENOUS STIMULUS | 23 | 1008 | 5.483e-05 | 0.00647 |
41 | CARDIAC MUSCLE CELL DIFFERENTIATION | 6 | 74 | 6.163e-05 | 0.006994 |
42 | CARTILAGE DEVELOPMENT | 8 | 147 | 6.614e-05 | 0.007328 |
43 | REGULATION OF PHOSPHORUS METABOLIC PROCESS | 31 | 1618 | 7.304e-05 | 0.007903 |
44 | CONNECTIVE TISSUE DEVELOPMENT | 9 | 194 | 8.02e-05 | 0.008481 |
Num | GO | Overlap | Size | P Value | Adj. P Value |
---|---|---|---|---|---|
1 | TRANSCRIPTIONAL ACTIVATOR ACTIVITY RNA POLYMERASE II CORE PROMOTER PROXIMAL REGION SEQUENCE SPECIFIC BINDING | 12 | 226 | 1.279e-06 | 0.001188 |
2 | TRANSCRIPTIONAL ACTIVATOR ACTIVITY RNA POLYMERASE II TRANSCRIPTION REGULATORY REGION SEQUENCE SPECIFIC BINDING | 13 | 315 | 7.431e-06 | 0.003452 |
3 | TRANSCRIPTION FACTOR ACTIVITY RNA POLYMERASE II CORE PROMOTER PROXIMAL REGION SEQUENCE SPECIFIC BINDING | 13 | 328 | 1.145e-05 | 0.003545 |
4 | REGULATORY REGION NUCLEIC ACID BINDING | 21 | 818 | 2.186e-05 | 0.004061 |
5 | RNA POLYMERASE II TRANSCRIPTION FACTOR ACTIVITY SEQUENCE SPECIFIC DNA BINDING | 18 | 629 | 2.142e-05 | 0.004061 |
6 | NUCLEIC ACID BINDING TRANSCRIPTION FACTOR ACTIVITY | 26 | 1199 | 4.068e-05 | 0.005504 |
7 | CORE PROMOTER PROXIMAL REGION DNA BINDING | 13 | 371 | 4.147e-05 | 0.005504 |
Num | GO | Overlap | Size | P Value | Adj. P Value |
---|
Num | Pathway | Pathview | Overlap | Size | P Value | Adj. P Value |
---|---|---|---|---|---|---|
1 | FoxO_signaling_pathway_hsa04068 | 8 | 132 | 3.073e-05 | 0.001598 | |
2 | MAPK_signaling_pathway_hsa04010 | 11 | 295 | 9.449e-05 | 0.002457 | |
3 | Gap_junction_hsa04540 | 6 | 88 | 0.0001621 | 0.00281 | |
4 | Endocytosis_hsa04144 | 9 | 244 | 0.000444 | 0.005772 | |
5 | Hippo_signaling_pathway_hsa04390 | 7 | 154 | 0.0005672 | 0.005899 | |
6 | Oocyte_meiosis_hsa04114 | 6 | 124 | 0.001017 | 0.008818 | |
7 | Wnt_signaling_pathway_hsa04310 | 6 | 146 | 0.002341 | 0.0144 | |
8 | Hippo_signaling_pathway_multiple_species_hsa04392 | 3 | 29 | 0.002347 | 0.0144 | |
9 | Focal_adhesion_hsa04510 | 7 | 199 | 0.002496 | 0.0144 | |
10 | mTOR_signaling_pathway_hsa04150 | 6 | 151 | 0.002769 | 0.0144 | |
11 | Regulation_of_actin_cytoskeleton_hsa04810 | 7 | 208 | 0.003192 | 0.01509 | |
12 | p53_signaling_pathway_hsa04115 | 4 | 68 | 0.00357 | 0.01547 | |
13 | Ferroptosis_hsa04216 | 3 | 40 | 0.005895 | 0.02358 | |
14 | TGF_beta_signaling_pathway_hsa04350 | 4 | 84 | 0.007553 | 0.02805 | |
15 | Phospholipase_D_signaling_pathway_hsa04072 | 5 | 146 | 0.01136 | 0.03939 | |
16 | Cellular_senescence_hsa04218 | 5 | 160 | 0.01632 | 0.05305 | |
17 | cGMP_PKG_signaling_pathway_hsa04022 | 5 | 163 | 0.01755 | 0.05367 | |
18 | Calcium_signaling_pathway_hsa04020 | 5 | 182 | 0.02672 | 0.07718 | |
19 | Apoptosis_hsa04210 | 4 | 138 | 0.03879 | 0.0982 | |
20 | Cytokine_cytokine_receptor_interaction_hsa04060 | 6 | 270 | 0.03909 | 0.0982 | |
21 | Signaling_pathways_regulating_pluripotency_of_stem_cells_hsa04550 | 4 | 139 | 0.03966 | 0.0982 | |
22 | Rap1_signaling_pathway_hsa04015 | 5 | 206 | 0.04203 | 0.09935 | |
23 | Phagosome_hsa04145 | 4 | 152 | 0.05203 | 0.1176 | |
24 | Ras_signaling_pathway_hsa04014 | 5 | 232 | 0.0636 | 0.1378 | |
25 | Sphingolipid_signaling_pathway_hsa04071 | 3 | 118 | 0.09531 | 0.1983 | |
26 | Lysosome_hsa04142 | 3 | 123 | 0.1046 | 0.2062 | |
27 | PI3K_Akt_signaling_pathway_hsa04151 | 6 | 352 | 0.1071 | 0.2062 | |
28 | Apelin_signaling_pathway_hsa04371 | 3 | 137 | 0.1325 | 0.2461 | |
29 | Cell_adhesion_molecules_.CAMs._hsa04514 | 3 | 145 | 0.1495 | 0.268 | |
30 | ECM_receptor_interaction_hsa04512 | 2 | 82 | 0.1743 | 0.2979 | |
31 | Peroxisome_hsa04146 | 2 | 83 | 0.1776 | 0.2979 | |
32 | ErbB_signaling_pathway_hsa04012 | 2 | 85 | 0.1842 | 0.2993 | |
33 | Tight_junction_hsa04530 | 3 | 170 | 0.2064 | 0.3252 | |
34 | Phosphatidylinositol_signaling_system_hsa04070 | 2 | 99 | 0.2312 | 0.3536 | |
35 | TNF_signaling_pathway_hsa04668 | 2 | 108 | 0.2619 | 0.38 | |
36 | Cell_cycle_hsa04110 | 2 | 124 | 0.3163 | 0.4445 | |
37 | Autophagy_animal_hsa04140 | 2 | 128 | 0.3298 | 0.4512 | |
38 | Jak_STAT_signaling_pathway_hsa04630 | 2 | 162 | 0.4404 | 0.5734 | |
39 | Necroptosis_hsa04217 | 2 | 164 | 0.4466 | 0.5734 | |
40 | cAMP_signaling_pathway_hsa04024 | 2 | 198 | 0.5459 | 0.6601 | |
41 | Neuroactive_ligand_receptor_interaction_hsa04080 | 2 | 278 | 0.7279 | 0.8228 |