This regulatory network was inferred from the input dataset. The miRNAs and mRNAs are
presented as round and rectangle nodes respectively. The numerical value popped up upon mouse over the gene node is the log2 transformed fold-change of the gene expression between the two groups. All of the nodes are clickable, and the detailed information of the miRNAs/mRNAs and related cancer pathway will be displayed in another window. The edges between nodes are supported by both interactions (predicted or experimentally verified) and correlations learnt from cancer dataset. The numerical value popped up upon mouse over the edge is the correlation beat value (effect size) between the two nodes. The experimental evidences of the edges reported in previous cancer studies are highlighted by red/orange color. All of these information can be accessed by the "mouse-over" action. This network shows a full map of the miRNA-mRNA regulation of the input gene list(s), and the hub miRNAs (with the high network degree/betweenness centrality) would be the potential cancer drivers or tumor suppressors. The full result table can be accessed in the "Regulations" tab.
"miRNACancerMAP" is also a network visualization tool for users to draw their regulatory network by personal customization. Users can set the complexity of the network by limiting the number of nodes or edges. And the color of the nodes can be defined by different categories of the mRNAs and miRNAs, such as Gene-Ontology, pathway, and expression status. Users can also select to use network degree or network betweenness centrality to define the node size. And edges can be black or colored by the correlation. Purple edge means negative correlation (mostly found between miRNA and mRNA), and blue edge means positive correlation (found in PPI or miRNA-miRNA sponge effect). We can also add the protein-protein interactions (PPI) into the network. This result will show the cluster of genes regulated by some specific miRNAs. Additionally, miRNA-miRNA edges can be added by the "miRNA sponge" button, presenting some clusters of miRNAs that have the interactions via sponge effect.
Num | microRNA | Gene | miRNA log2FC | miRNA pvalue | Gene log2FC | Gene pvalue | Interaction | Correlation beta | Correlation P-value | PMID | Reported in cancer studies |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | hsa-miR-186-5p | ADH1B | 0.35 | 0.00015 | -6.83 | 0 | mirMAP | -0.74 | 0.00411 | NA | |
2 | hsa-miR-23a-3p | ADH1B | 0.35 | 6.0E-5 | -6.83 | 0 | mirMAP | -1.24 | 1.0E-5 | NA | |
3 | hsa-miR-3127-5p | ADH1B | 0.71 | 2.0E-5 | -6.83 | 0 | MirTarget | -0.56 | 8.0E-5 | NA | |
4 | hsa-miR-374b-3p | ADH1B | 0.43 | 0.00147 | -6.83 | 0 | mirMAP | -0.38 | 0.03473 | NA | |
5 | hsa-miR-429 | ADH1B | 0.56 | 0.00564 | -6.83 | 0 | miRanda | -0.54 | 0 | NA | |
6 | hsa-miR-450b-5p | ADH1B | 1.26 | 0 | -6.83 | 0 | MirTarget | -1.08 | 0 | NA | |
7 | hsa-miR-500a-5p | ADH1B | 0.68 | 8.0E-5 | -6.83 | 0 | mirMAP | -0.46 | 0.00075 | NA | |
8 | hsa-miR-501-5p | ADH1B | 1.03 | 0 | -6.83 | 0 | mirMAP | -0.65 | 0 | NA | |
9 | hsa-miR-7-1-3p | ADH1B | 1.14 | 0 | -6.83 | 0 | mirMAP | -0.85 | 0 | NA | |
10 | hsa-miR-205-3p | ADIPOQ | 1.3 | 0 | -7.62 | 0 | mirMAP | -0.95 | 0 | NA | |
11 | hsa-miR-21-3p | ADIPOQ | 1.25 | 0 | -7.62 | 0 | MirTarget | -1.23 | 0 | NA | |
12 | hsa-miR-320a | ADIPOQ | 0.8 | 0 | -7.62 | 0 | miRanda | -1 | 0 | NA | |
13 | hsa-miR-320b | ADIPOQ | 1.23 | 0 | -7.62 | 0 | miRanda | -0.99 | 0 | NA | |
14 | hsa-miR-330-5p | ADIPOQ | 0.94 | 0 | -7.62 | 0 | miRanda | -0.9 | 0 | NA | |
15 | hsa-miR-339-5p | ADIPOQ | 1.08 | 0 | -7.62 | 0 | miRanda | -0.85 | 0 | NA | |
16 | hsa-miR-429 | ADIPOQ | 0.56 | 0.00564 | -7.62 | 0 | miRanda | -0.69 | 0 | NA | |
17 | hsa-miR-501-3p | ADIPOQ | 0.82 | 0 | -7.62 | 0 | MirTarget | -0.76 | 0 | NA | |
18 | hsa-miR-590-3p | ADIPOQ | 0.22 | 0.09659 | -7.62 | 0 | PITA; miRanda; mirMAP | -0.35 | 0.0444 | NA | |
19 | hsa-miR-940 | ADIPOQ | 1.25 | 0 | -7.62 | 0 | MirTarget | -0.75 | 0 | NA | |
20 | hsa-miR-26b-5p | CA9 | -0.25 | 0.02852 | 6.18 | 0 | miRNAWalker2 validate | -0.49 | 0.00667 | NA | |
21 | hsa-let-7a-3p | CFTR | 0.1 | 0.42376 | -5.54 | 0 | MirTarget | -0.39 | 0.03631 | NA | |
22 | hsa-let-7f-1-3p | CFTR | 0.7 | 0 | -5.54 | 0 | MirTarget | -0.62 | 0.00027 | NA | |
23 | hsa-miR-15b-3p | CFTR | 1.05 | 0 | -5.54 | 0 | mirMAP | -0.44 | 0.00469 | NA | |
24 | hsa-miR-185-5p | CFTR | 0.68 | 0 | -5.54 | 0 | MirTarget | -0.94 | 0.0001 | NA | |
25 | hsa-miR-223-3p | CFTR | 0.41 | 0.04882 | -5.54 | 0 | MirTarget | -0.26 | 0.01624 | NA | |
26 | hsa-miR-29a-5p | CFTR | 0.32 | 0.03704 | -5.54 | 0 | mirMAP | -0.53 | 0.00023 | NA | |
27 | hsa-miR-339-5p | CFTR | 1.08 | 0 | -5.54 | 0 | miRanda | -0.49 | 6.0E-5 | NA | |
28 | hsa-miR-590-5p | CFTR | 0.76 | 0 | -5.54 | 0 | miRanda | -0.55 | 0.00138 | NA | |
29 | hsa-miR-671-5p | CFTR | 1.91 | 0 | -5.54 | 0 | MirTarget | -1.04 | 0 | NA | |
30 | hsa-miR-944 | CFTR | 1.47 | 0 | -5.54 | 0 | MirTarget; PITA | -0.46 | 2.0E-5 | NA | |
31 | hsa-miR-421 | CHST9 | 0.95 | 0 | -5.4 | 0 | MirTarget | -0.38 | 0.02021 | NA | |
32 | hsa-miR-501-5p | CHST9 | 1.03 | 0 | -5.4 | 0 | miRNATAP | -0.35 | 0.02071 | NA | |
33 | hsa-miR-92a-3p | CHST9 | 0.99 | 0 | -5.4 | 0 | miRNAWalker2 validate | -0.58 | 0.00595 | NA | |
34 | hsa-miR-101-3p | COL10A1 | -1.91 | 0 | 5.15 | 0 | miRNATAP | -0.9 | 0 | NA | |
35 | hsa-miR-144-3p | COL10A1 | -1.65 | 0 | 5.15 | 0 | miRNATAP | -0.4 | 0 | NA | |
36 | hsa-miR-16-2-3p | COL10A1 | 1.16 | 0 | 5.15 | 0 | mirMAP | -0.48 | 0.00011 | NA | |
37 | hsa-miR-186-5p | COL10A1 | 0.35 | 0.00015 | 5.15 | 0 | mirMAP | -0.57 | 0.00551 | NA | |
38 | hsa-miR-26a-5p | COL10A1 | -1.09 | 0 | 5.15 | 0 | miRNATAP | -0.65 | 8.0E-5 | NA | |
39 | hsa-miR-26b-5p | COL10A1 | -0.25 | 0.02852 | 5.15 | 0 | miRNATAP | -0.93 | 0 | NA | |
40 | hsa-miR-335-5p | COL10A1 | -1.17 | 0 | 5.15 | 0 | miRNAWalker2 validate | -0.44 | 1.0E-5 | NA | |
41 | hsa-miR-342-3p | COL10A1 | 1 | 0 | 5.15 | 0 | miRanda | -0.23 | 0.04763 | NA | |
42 | hsa-miR-502-3p | COL10A1 | -0.17 | 0.10688 | 5.15 | 0 | miRNATAP | -0.87 | 0 | NA | |
43 | hsa-miR-590-3p | COL10A1 | 0.22 | 0.09659 | 5.15 | 0 | miRanda; mirMAP | -0.55 | 0.00012 | NA | |
44 | hsa-miR-182-5p | CRISP3 | 1.15 | 0 | -8.53 | 0 | MirTarget | -0.38 | 0.01571 | NA | |
45 | hsa-miR-186-5p | CRISP3 | 0.35 | 0.00015 | -8.53 | 0 | mirMAP | -1 | 0.00177 | NA | |
46 | hsa-miR-335-3p | CRISP3 | 0.34 | 0.05424 | -8.53 | 0 | mirMAP | -0.39 | 0.02108 | NA | |
47 | hsa-miR-3607-3p | CRISP3 | 1.01 | 9.0E-5 | -8.53 | 0 | MirTarget | -0.39 | 0.00063 | NA | |
48 | hsa-miR-629-3p | CRISP3 | 1.43 | 0 | -8.53 | 0 | MirTarget | -0.81 | 1.0E-5 | NA | |
49 | hsa-miR-146b-5p | CYP2F1 | 0.92 | 0 | -5.54 | 0 | miRanda | -0.61 | 0 | NA | |
50 | hsa-let-7a-2-3p | CYP4B1 | 0 | 0.99165 | -5.54 | 0 | MirTarget | -0.38 | 0.00026 | NA | |
51 | hsa-miR-324-5p | CYP4B1 | 1.67 | 0 | -5.54 | 0 | miRanda | -0.62 | 1.0E-5 | NA | |
52 | hsa-miR-940 | CYP4B1 | 1.25 | 0 | -5.54 | 0 | miRNATAP | -0.28 | 0.02353 | NA | |
53 | hsa-miR-15a-5p | DLK1 | 0.78 | 0 | -5.53 | 0 | miRNAWalker2 validate | -0.95 | 0 | NA | |
54 | hsa-miR-130b-5p | EDN3 | 1.77 | 0 | -5.71 | 0 | mirMAP | -0.85 | 0 | NA | |
55 | hsa-miR-330-5p | EDN3 | 0.94 | 0 | -5.71 | 0 | miRanda | -0.7 | 0 | NA | |
56 | hsa-miR-450b-5p | EDN3 | 1.26 | 0 | -5.71 | 0 | MirTarget | -0.4 | 0.00133 | NA | |
57 | hsa-miR-744-3p | EDN3 | 1.19 | 0 | -5.71 | 0 | MirTarget | -0.68 | 0 | NA | |
58 | hsa-miR-769-3p | EDN3 | 0.9 | 0 | -5.71 | 0 | miRNATAP | -0.54 | 1.0E-5 | NA | |
59 | hsa-miR-99b-3p | EDN3 | 0.72 | 0 | -5.71 | 0 | MirTarget | -0.3 | 0.03995 | NA | |
60 | hsa-miR-125a-5p | FMO2 | 0.22 | 0.11955 | -5.31 | 0 | MirTarget; miRanda | -0.33 | 0.02212 | NA | |
61 | hsa-miR-146b-5p | FMO2 | 0.92 | 0 | -5.31 | 0 | miRanda | -0.26 | 0.04522 | NA | |
62 | hsa-miR-15b-3p | FMO2 | 1.05 | 0 | -5.31 | 0 | mirMAP | -0.72 | 0 | NA | |
63 | hsa-miR-182-5p | FMO2 | 1.15 | 0 | -5.31 | 0 | MirTarget | -0.48 | 1.0E-5 | NA | |
64 | hsa-miR-185-5p | FMO2 | 0.68 | 0 | -5.31 | 0 | miRNATAP | -1.03 | 0 | NA | |
65 | hsa-miR-186-5p | FMO2 | 0.35 | 0.00015 | -5.31 | 0 | mirMAP | -0.61 | 0.00521 | NA | |
66 | hsa-miR-205-3p | FMO2 | 1.3 | 0 | -5.31 | 0 | mirMAP | -0.51 | 0 | NA | |
67 | hsa-miR-29a-5p | FMO2 | 0.32 | 0.03704 | -5.31 | 0 | mirMAP | -0.41 | 0.00162 | NA | |
68 | hsa-miR-421 | FMO2 | 0.95 | 0 | -5.31 | 0 | MirTarget; miRanda | -0.33 | 0.00792 | NA | |
69 | hsa-miR-944 | FMO2 | 1.47 | 0 | -5.31 | 0 | mirMAP | -0.45 | 0 | NA | |
70 | hsa-miR-16-2-3p | HMGCS2 | 1.16 | 0 | -6.26 | 0 | MirTarget | -0.96 | 0 | NA | |
71 | hsa-miR-23a-5p | HMGCS2 | 1.66 | 0 | -6.26 | 0 | MirTarget | -0.56 | 0 | NA | |
72 | hsa-miR-339-5p | HMGCS2 | 1.08 | 0 | -6.26 | 0 | miRanda | -0.46 | 0.0001 | NA | |
73 | hsa-miR-590-5p | HMGCS2 | 0.76 | 0 | -6.26 | 0 | miRanda | -0.71 | 2.0E-5 | NA | |
74 | hsa-let-7a-5p | HOXC11 | -0.44 | 3.0E-5 | 5.05 | 0 | TargetScan; miRNATAP | -0.4 | 0.02491 | NA | |
75 | hsa-let-7f-5p | HOXC11 | -0.44 | 0.00243 | 5.05 | 0 | miRNATAP | -0.28 | 0.03141 | NA | |
76 | hsa-let-7g-5p | HOXC11 | -0.25 | 0.0094 | 5.05 | 0 | miRNATAP | -0.8 | 4.0E-5 | NA | |
77 | hsa-miR-195-5p | HOXC11 | -1.84 | 0 | 5.05 | 0 | miRNATAP | -0.59 | 0 | NA | |
78 | hsa-miR-217 | HOXC11 | -1.35 | 0 | 5.05 | 0 | PITA; miRanda | -0.3 | 0.00023 | NA | |
79 | hsa-miR-23b-3p | HOXC11 | -0.5 | 3.0E-5 | 5.05 | 0 | miRNATAP | -1.08 | 0 | NA | |
80 | hsa-miR-27b-3p | HOXC11 | -0.73 | 0 | 5.05 | 0 | miRNATAP | -1.06 | 0 | NA | |
81 | hsa-miR-29b-2-5p | HOXC11 | -0.5 | 0.00073 | 5.05 | 0 | mirMAP | -0.73 | 0 | NA | |
82 | hsa-miR-326 | HOXC11 | -0.43 | 0.0415 | 5.05 | 0 | miRanda | -0.28 | 0.00197 | NA | |
83 | hsa-miR-375 | HOXC11 | -4.24 | 0 | 5.05 | 0 | miRanda; miRNATAP | -0.4 | 0 | NA | |
84 | hsa-miR-491-5p | HOXC11 | -0.54 | 0.00136 | 5.05 | 0 | miRanda | -0.29 | 0.01077 | NA | |
85 | hsa-miR-497-5p | HOXC11 | -0.97 | 0 | 5.05 | 0 | miRNATAP | -0.59 | 1.0E-5 | NA | |
86 | hsa-miR-502-3p | HOXC11 | -0.17 | 0.10688 | 5.05 | 0 | miRNATAP | -0.69 | 0.00019 | NA | |
87 | hsa-miR-126-5p | HOXD13 | -0.95 | 0 | 5.06 | 0 | mirMAP | -0.96 | 0 | NA | |
88 | hsa-miR-26a-5p | HOXD13 | -1.09 | 0 | 5.06 | 0 | miRNATAP | -1.09 | 0 | NA | |
89 | hsa-miR-26b-5p | HOXD13 | -0.25 | 0.02852 | 5.06 | 0 | miRNATAP | -0.69 | 0.00071 | NA | |
90 | hsa-miR-654-3p | HOXD13 | -1.78 | 0 | 5.06 | 0 | PITA | -0.21 | 0.03302 | NA | |
91 | hsa-let-7a-5p | IGF2BP1 | -0.44 | 3.0E-5 | 5.27 | 0 | miRTarBase; MirTarget; TargetScan; miRNATAP | -0.64 | 0.00596 | NA | |
92 | hsa-let-7b-5p | IGF2BP1 | -0.25 | 0.02114 | 5.27 | 0 | miRNAWalker2 validate; miRTarBase; MirTarget; miRNATAP | -0.93 | 5.0E-5 | NA | |
93 | hsa-let-7c-5p | IGF2BP1 | -2.08 | 0 | 5.27 | 0 | MirTarget | -0.46 | 3.0E-5 | NA | |
94 | hsa-miR-125b-2-3p | IGF2BP1 | -1.88 | 0 | 5.27 | 0 | mirMAP | -0.33 | 0.00049 | NA | |
95 | hsa-miR-125b-5p | IGF2BP1 | -0.99 | 0 | 5.27 | 0 | mirMAP | -0.49 | 0.00378 | NA | |
96 | hsa-miR-126-5p | IGF2BP1 | -0.95 | 0 | 5.27 | 0 | mirMAP | -0.9 | 1.0E-5 | NA | |
97 | hsa-miR-140-5p | IGF2BP1 | -0.41 | 0.00014 | 5.27 | 0 | PITA | -0.48 | 0.03641 | 27588393 | MicroRNA 140 5p targets insulin like growth factor 2 mRNA binding protein 1 IGF2BP1 to suppress cervical cancer growth and metastasis; Furthermore Insulin like growth factor 2 mRNA binding protein 1 IGF2BP1 was identified as a direct target of miR-140-5p and both gain-of-function and loss-of-function assays revealed that IGF2BP1 is also a functional target of miR-140-5p |
98 | hsa-miR-195-3p | IGF2BP1 | -0.62 | 0.00016 | 5.27 | 0 | mirMAP | -0.45 | 0.00229 | NA | |
99 | hsa-miR-195-5p | IGF2BP1 | -1.84 | 0 | 5.27 | 0 | mirMAP | -0.76 | 0 | NA | |
100 | hsa-miR-221-5p | IGF2BP1 | -0.53 | 0.03792 | 5.27 | 0 | miRNATAP | -0.19 | 0.04247 | NA | |
101 | hsa-miR-30a-3p | IGF2BP1 | -2.26 | 0 | 5.27 | 0 | mirMAP | -0.45 | 0.00015 | NA | |
102 | hsa-miR-30c-2-3p | IGF2BP1 | -1.83 | 0 | 5.27 | 0 | mirMAP | -0.28 | 0.02297 | NA | |
103 | hsa-miR-30e-3p | IGF2BP1 | -0.89 | 0 | 5.27 | 0 | mirMAP | -1.07 | 0 | NA | |
104 | hsa-miR-326 | IGF2BP1 | -0.43 | 0.0415 | 5.27 | 0 | miRanda; miRNATAP | -0.33 | 0.00586 | NA | |
105 | hsa-miR-361-3p | IGF2BP1 | 0.27 | 0.01479 | 5.27 | 0 | miRNATAP | -0.54 | 0.01493 | NA | |
106 | hsa-miR-378a-3p | IGF2BP1 | -1.5 | 0 | 5.27 | 0 | miRNAWalker2 validate | -0.48 | 0.00022 | NA | |
107 | hsa-miR-628-5p | IGF2BP1 | -0.55 | 5.0E-5 | 5.27 | 0 | miRNATAP | -0.38 | 0.03496 | NA | |
108 | hsa-miR-330-5p | KRT13 | 0.94 | 0 | -5.14 | 0 | miRanda | -0.58 | 0.00782 | NA | |
109 | hsa-miR-339-5p | KRT4 | 1.08 | 0 | -7.35 | 0 | miRanda | -0.63 | 0.00042 | NA | |
110 | hsa-miR-421 | LTF | 0.95 | 0 | -5.74 | 0 | miRanda | -0.55 | 0.00345 | NA | |
111 | hsa-miR-34c-5p | MAL | 0.57 | 0.02241 | -6.08 | 0 | miRanda | -0.22 | 0.03124 | NA | |
112 | hsa-miR-326 | MMP1 | -0.43 | 0.0415 | 5.45 | 0 | miRanda | -0.23 | 0.01675 | NA | |
113 | hsa-miR-145-5p | MMP12 | -0.47 | 0.00069 | 6.89 | 0 | miRNAWalker2 validate | -0.42 | 0.04822 | NA | |
114 | hsa-miR-299-5p | MMP12 | -1.92 | 0 | 6.89 | 0 | MirTarget | -0.43 | 0.00046 | NA | |
115 | hsa-miR-125b-5p | MMP13 | -0.99 | 0 | 6.01 | 0 | miRNAWalker2 validate; miRTarBase | -0.62 | 0.00029 | 25772251; 23425975 | This study aimed to determine the relationship between expression of miR-125b and matrix metalloproteinase 13 encoded by MMP-13 and the metastatic potential of cancer cells in NSCLC; Expression levels of miR-125b transcripts and MMP-13 proteins were analyzed by quantitative real-time PCR and immunohistochemistry respectively in tumor tissues and adjacent nontumor tissues from 42 patients with NSCLC; The interaction between miR-125b and MMP-13 expression and the associations between miR-125b and clinicopathologic data were analyzed; Additionally we have demonstrated that increased levels of miR-125b can directly downregulate MMP-13 protein expression and inhibit the invasive capabilities of cancer cells; Expression levels of miR-125b were negatively correlated with metastatic potential of NSCLC tumors which may function through regulation of MMP-13;We also provided the first evidence that miR-125b may directly target matrix metalloproteinase 13 MMP13 in bladder cancer; Our study provided evidence that miR-125b suppresses cell migration and invasion by targeting MMP13 in bladder cancer cell lines |
116 | hsa-miR-126-5p | MMP13 | -0.95 | 0 | 6.01 | 0 | mirMAP | -1.11 | 0 | NA | |
117 | hsa-miR-140-5p | MMP13 | -0.41 | 0.00014 | 6.01 | 0 | miRNAWalker2 validate | -0.64 | 0.0065 | NA | |
118 | hsa-miR-148a-3p | MMP13 | -0.43 | 0.00954 | 6.01 | 0 | MirTarget | -0.83 | 0 | 26298724 | MicroRNA 148a inhibits migration of breast cancer cells by targeting MMP 13; To further explore the mechanism through which miR-148a plays its antitumor role matrix metalloproteinase-13 MMP-13 was identified as a target of miR-148a by western blot and luciferase reporter assay; Moreover silence of MMP-13 mimicked the effect of miR-148a whereas overexpression of MMP-13 rescued the impaired migration caused by miR-148a; Our study demonstrates that miR-148a inhibits the migration of breast cancer cells by targeting MMP-13 and also lays theoretical foundation for further exploration for the function of miR-148a |
119 | hsa-miR-148b-3p | MMP13 | 0.39 | 0 | 6.01 | 0 | MirTarget | -0.79 | 0.00844 | NA | |
120 | hsa-miR-27b-3p | MMP13 | -0.73 | 0 | 6.01 | 0 | miRNAWalker2 validate; miRTarBase; miRNATAP | -1.54 | 0 | NA | |
121 | hsa-miR-335-3p | MMP13 | 0.34 | 0.05424 | 6.01 | 0 | MirTarget; mirMAP | -0.72 | 0 | NA | |
122 | hsa-miR-338-3p | MMP13 | -0.95 | 0 | 6.01 | 0 | miRanda | -0.32 | 0.02362 | NA | |
123 | hsa-miR-374a-5p | MMP13 | -0.62 | 0 | 6.01 | 0 | mirMAP | -1.28 | 0 | NA | |
124 | hsa-miR-374b-5p | MMP13 | -0.29 | 0.00415 | 6.01 | 0 | mirMAP | -0.84 | 0.00085 | NA | |
125 | hsa-miR-590-3p | MMP13 | 0.22 | 0.09659 | 6.01 | 0 | miRanda; mirMAP | -0.56 | 0.00335 | NA | |
126 | hsa-miR-664a-3p | MMP13 | -0.26 | 0.05132 | 6.01 | 0 | MirTarget | -0.39 | 0.04131 | NA | |
127 | hsa-miR-9-5p | MMP13 | 1.66 | 2.0E-5 | 6.01 | 0 | miRNAWalker2 validate; miRTarBase | -0.44 | 0 | NA | |
128 | hsa-miR-17-5p | MUC21 | 1.42 | 0 | -7.9 | 0 | miRNAWalker2 validate | -0.72 | 0.0003 | NA | |
129 | hsa-miR-199a-5p | MUC21 | -0.36 | 0.04351 | -7.9 | 0 | MirTarget; miRanda | -0.42 | 0.02348 | NA | |
130 | hsa-miR-31-5p | MUC21 | 2.79 | 0 | -7.9 | 0 | MirTarget | -0.34 | 9.0E-5 | NA | |
131 | hsa-miR-320a | MUC21 | 0.8 | 0 | -7.9 | 0 | miRanda | -0.86 | 0.00037 | NA | |
132 | hsa-miR-320b | MUC21 | 1.23 | 0 | -7.9 | 0 | miRanda | -0.64 | 0.00134 | NA | |
133 | hsa-miR-339-5p | MUC21 | 1.08 | 0 | -7.9 | 0 | miRanda | -0.66 | 0.00029 | NA | |
134 | hsa-miR-450b-5p | MUC21 | 1.26 | 0 | -7.9 | 0 | mirMAP | -1.56 | 0 | NA | |
135 | hsa-miR-142-3p | MUC7 | 1.13 | 0 | -6.64 | 0 | miRanda | -0.57 | 0.00012 | NA | |
136 | hsa-miR-16-2-3p | MUC7 | 1.16 | 0 | -6.64 | 0 | mirMAP | -1.2 | 0 | NA | |
137 | hsa-miR-181a-5p | MUC7 | 0.82 | 0 | -6.64 | 0 | MirTarget | -1.41 | 0 | NA | |
138 | hsa-miR-181b-5p | MUC7 | 0.97 | 0 | -6.64 | 0 | MirTarget | -1.18 | 0 | NA | |
139 | hsa-miR-542-3p | MUC7 | 0.64 | 0 | -6.64 | 0 | MirTarget; miRanda | -0.47 | 0.03932 | NA | |
140 | hsa-miR-576-5p | MUC7 | 0.94 | 0 | -6.64 | 0 | mirMAP | -1.44 | 0 | NA | |
141 | hsa-miR-130b-5p | MYBPC1 | 1.77 | 0 | -5.23 | 0 | miRNAWalker2 validate | -1.15 | 0 | NA | |
142 | hsa-miR-590-3p | MYBPC1 | 0.22 | 0.09659 | -5.23 | 0 | miRanda | -0.59 | 0.02515 | NA | |
143 | hsa-miR-92a-3p | MYH2 | 0.99 | 0 | -5.64 | 0 | miRNAWalker2 validate | -2.2 | 0 | NA | |
144 | hsa-miR-324-5p | MYOC | 1.67 | 0 | -6.54 | 0 | miRanda | -0.79 | 0 | NA | |
145 | hsa-miR-542-3p | MYOC | 0.64 | 0 | -6.54 | 0 | miRanda | -0.41 | 0.00603 | NA | |
146 | hsa-miR-590-3p | NRAP | 0.22 | 0.09659 | -5.1 | 0 | miRanda | -0.79 | 0.00367 | NA | |
147 | hsa-miR-34c-5p | PEBP4 | 0.57 | 0.02241 | -5 | 0 | miRanda | -0.2 | 0.00829 | NA | |
148 | hsa-miR-361-5p | PLA2G2A | 0.08 | 0.31404 | -5.08 | 0 | miRanda | -0.78 | 0.00829 | NA | |
149 | hsa-miR-130b-3p | PLIN1 | 1.45 | 0 | -5.21 | 0 | mirMAP | -0.75 | 0 | NA | |
150 | hsa-miR-193a-3p | PLIN1 | 0.22 | 0.11183 | -5.21 | 0 | miRanda | -0.23 | 0.04881 | NA |
Num | GO | Overlap | Size | P Value | Adj. P Value |
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Num | GO | Overlap | Size | P Value | Adj. P Value |
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Num | GO | Overlap | Size | P Value | Adj. P Value |
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Num | Pathway | Pathview | Overlap | Size | P Value | Adj. P Value |
---|---|---|---|---|---|---|
1 | AMPK_signaling_pathway_hsa04152 | 2 | 121 | 0.02438 | 1 | |
2 | Tight_junction_hsa04530 | 2 | 170 | 0.04538 | 1 |
Num | lncRNA | miRNAs | miRNAs count | Gene | Sponge regulatory network | lncRNA log2FC | lncRNA pvalue | Gene log2FC | Gene pvalue | lncRNA-gene Pearson correlation |
---|---|---|---|---|---|---|---|---|---|---|
1 | RP11-218E20.3 |
hsa-let-7a-5p;hsa-let-7f-5p;hsa-let-7g-5p;hsa-miR-195-5p;hsa-miR-217;hsa-miR-23b-3p;hsa-miR-27b-3p;hsa-miR-29b-2-5p;hsa-miR-326;hsa-miR-375;hsa-miR-491-5p;hsa-miR-497-5p;hsa-miR-502-3p | 13 | HOXC11 | Sponge network | 4.613 | 0 | 5.052 | 0 | 0.531 |
2 | TPTEP1 | hsa-let-7a-3p;hsa-let-7f-1-3p;hsa-miR-15b-3p;hsa-miR-185-5p;hsa-miR-223-3p;hsa-miR-29a-5p;hsa-miR-339-5p;hsa-miR-590-5p;hsa-miR-671-5p;hsa-miR-944 | 10 | CFTR | Sponge network | -2.193 | 0 | -5.541 | 0 | 0.496 |
3 | RP11-445F12.1 | hsa-let-7a-5p;hsa-let-7f-5p;hsa-let-7g-5p;hsa-miR-195-5p;hsa-miR-217;hsa-miR-23b-3p;hsa-miR-27b-3p;hsa-miR-29b-2-5p;hsa-miR-491-5p;hsa-miR-497-5p | 10 | HOXC11 | Sponge network | 7.107 | 0 | 5.052 | 0 | 0.445 |
4 | CTD-2587H24.5 |
hsa-let-7a-5p;hsa-let-7f-5p;hsa-let-7g-5p;hsa-miR-195-5p;hsa-miR-217;hsa-miR-23b-3p;hsa-miR-27b-3p;hsa-miR-29b-2-5p;hsa-miR-491-5p;hsa-miR-497-5p | 10 | HOXC11 | Sponge network | 7.138 | 0 | 5.052 | 0 | 0.395 |
5 | LINC00520 |
hsa-let-7a-5p;hsa-let-7f-5p;hsa-let-7g-5p;hsa-miR-195-5p;hsa-miR-217;hsa-miR-23b-3p;hsa-miR-27b-3p;hsa-miR-29b-2-5p;hsa-miR-375;hsa-miR-497-5p | 10 | HOXC11 | Sponge network | 3.383 | 0 | 5.052 | 0 | 0.384 |
6 | KB-1732A1.1 |
hsa-let-7a-5p;hsa-let-7f-5p;hsa-let-7g-5p;hsa-miR-195-5p;hsa-miR-217;hsa-miR-23b-3p;hsa-miR-27b-3p;hsa-miR-29b-2-5p;hsa-miR-491-5p;hsa-miR-497-5p | 10 | HOXC11 | Sponge network | 1.697 | 0 | 5.052 | 0 | 0.364 |
7 | LINC00941 |
hsa-let-7a-5p;hsa-let-7f-5p;hsa-let-7g-5p;hsa-miR-195-5p;hsa-miR-217;hsa-miR-23b-3p;hsa-miR-27b-3p;hsa-miR-29b-2-5p;hsa-miR-375;hsa-miR-497-5p | 10 | HOXC11 | Sponge network | 4.292 | 0 | 5.052 | 0 | 0.363 |
8 | LINC00941 |
hsa-let-7a-5p;hsa-let-7c-5p;hsa-miR-125b-2-3p;hsa-miR-125b-5p;hsa-miR-126-5p;hsa-miR-140-5p;hsa-miR-195-3p;hsa-miR-195-5p;hsa-miR-30a-3p;hsa-miR-30c-2-3p;hsa-miR-378a-3p;hsa-miR-628-5p | 12 | IGF2BP1 | Sponge network | 4.292 | 0 | 5.27 | 0 | 0.34 |
9 | CTD-2354A18.1 | hsa-let-7a-5p;hsa-let-7b-5p;hsa-let-7c-5p;hsa-miR-125b-2-3p;hsa-miR-125b-5p;hsa-miR-140-5p;hsa-miR-195-3p;hsa-miR-195-5p;hsa-miR-30a-3p;hsa-miR-30e-3p;hsa-miR-628-5p | 11 | IGF2BP1 | Sponge network | 4.214 | 0 | 5.27 | 0 | 0.334 |
10 | RP11-218E20.3 |
hsa-let-7a-5p;hsa-let-7c-5p;hsa-miR-125b-2-3p;hsa-miR-125b-5p;hsa-miR-126-5p;hsa-miR-140-5p;hsa-miR-195-3p;hsa-miR-195-5p;hsa-miR-30a-3p;hsa-miR-30c-2-3p;hsa-miR-30e-3p;hsa-miR-326;hsa-miR-628-5p | 13 | IGF2BP1 | Sponge network | 4.613 | 0 | 5.27 | 0 | 0.314 |
11 | NOP14-AS1 |
hsa-let-7a-5p;hsa-let-7f-5p;hsa-let-7g-5p;hsa-miR-195-5p;hsa-miR-217;hsa-miR-23b-3p;hsa-miR-27b-3p;hsa-miR-29b-2-5p;hsa-miR-491-5p;hsa-miR-497-5p;hsa-miR-502-3p | 11 | HOXC11 | Sponge network | 0.939 | 0 | 5.052 | 0 | 0.313 |
12 | VPS9D1-AS1 | hsa-let-7a-5p;hsa-let-7b-5p;hsa-let-7c-5p;hsa-miR-125b-2-3p;hsa-miR-125b-5p;hsa-miR-195-5p;hsa-miR-30a-3p;hsa-miR-30c-2-3p;hsa-miR-326;hsa-miR-378a-3p;hsa-miR-628-5p | 11 | IGF2BP1 | Sponge network | 1.07 | 1.0E-5 | 5.27 | 0 | 0.305 |
13 | AC007879.7 | hsa-let-7a-5p;hsa-let-7c-5p;hsa-miR-125b-2-3p;hsa-miR-126-5p;hsa-miR-140-5p;hsa-miR-195-3p;hsa-miR-195-5p;hsa-miR-30a-3p;hsa-miR-30c-2-3p;hsa-miR-30e-3p;hsa-miR-326;hsa-miR-361-3p | 12 | IGF2BP1 | Sponge network | 2.7 | 0 | 5.27 | 0 | 0.274 |
14 | APCDD1L-AS1 |
hsa-let-7g-5p;hsa-miR-195-5p;hsa-miR-217;hsa-miR-23b-3p;hsa-miR-27b-3p;hsa-miR-29b-2-5p;hsa-miR-326;hsa-miR-375;hsa-miR-491-5p;hsa-miR-497-5p | 10 | HOXC11 | Sponge network | 2.077 | 0 | 5.052 | 0 | 0.272 |
15 | LINC00504 |
hsa-miR-126-5p;hsa-miR-140-5p;hsa-miR-148a-3p;hsa-miR-148b-3p;hsa-miR-27b-3p;hsa-miR-335-3p;hsa-miR-374a-5p;hsa-miR-374b-5p;hsa-miR-590-3p;hsa-miR-9-5p | 10 | MMP13 | Sponge network | 0.779 | 0.08061 | 6.01 | 0 | 0.258 |