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This regulatory network was inferred from the input dataset. The miRNAs and mRNAs are presented as round and rectangle nodes respectively. The numerical value popped up upon mouse over the gene node is the log2 transformed fold-change of the gene expression between the two groups. All of the nodes are clickable, and the detailed information of the miRNAs/mRNAs and related cancer pathway will be displayed in another window. The edges between nodes are supported by both interactions (predicted or experimentally verified) and correlations learnt from cancer dataset. The numerical value popped up upon mouse over the edge is the correlation beat value (effect size) between the two nodes. The experimental evidences of the edges reported in previous cancer studies are highlighted by red/orange color. All of these information can be accessed by the "mouse-over" action. This network shows a full map of the miRNA-mRNA regulation of the input gene list(s), and the hub miRNAs (with the high network degree/betweenness centrality) would be the potential cancer drivers or tumor suppressors. The full result table can be accessed in the "Regulations" tab.

"miRNACancerMAP" is also a network visualization tool for users to draw their regulatory network by personal customization. Users can set the complexity of the network by limiting the number of nodes or edges. And the color of the nodes can be defined by different categories of the mRNAs and miRNAs, such as Gene-Ontology, pathway, and expression status. Users can also select to use network degree or network betweenness centrality to define the node size. And edges can be black or colored by the correlation. Purple edge means negative correlation (mostly found between miRNA and mRNA), and blue edge means positive correlation (found in PPI or miRNA-miRNA sponge effect). We can also add the protein-protein interactions (PPI) into the network. This result will show the cluster of genes regulated by some specific miRNAs. Additionally, miRNA-miRNA edges can be added by the "miRNA sponge" button, presenting some clusters of miRNAs that have the interactions via sponge effect.

miRNA-gene regulations

(Download full result)

Num microRNA           Gene miRNA log2FC miRNA pvalue Gene log2FC Gene pvalue Interaction Correlation beta Correlation P-value PMID Reported in cancer studies
1 hsa-miR-154-3p ABCA13 -0.64 0.23454 2.71 0.0092 MirTarget -0.39 0.00629 NA
2 hsa-miR-154-3p ABTB2 -0.64 0.23454 0.09 0.87066 MirTarget; TargetScan -0.17 0.02876 NA
3 hsa-let-7a-3p ANTXR1 -0.95 0.00672 -0.08 0.90778 mirMAP; miRNATAP -0.34 0.01278 NA
4 hsa-let-7g-3p ANTXR1 -0.84 0.01923 -0.08 0.90778 miRNATAP -0.59 1.0E-5 NA
5 hsa-miR-107 ANTXR1 0.04 0.89912 -0.08 0.90778 miRanda -0.42 0.01653 NA
6 hsa-miR-1270 ANTXR1 -0.95 0.087 -0.08 0.90778 mirMAP -0.25 0.0052 NA
7 hsa-miR-129-5p ANTXR1 1.01 0.36712 -0.08 0.90778 miRanda; mirMAP -0.11 0.01096 NA
8 hsa-miR-151a-3p ANTXR1 0.14 0.57827 -0.08 0.90778 mirMAP -0.62 0.00207 NA
9 hsa-miR-194-3p ANTXR1 2.07 0.00253 -0.08 0.90778 MirTarget -0.23 0.00113 NA
10 hsa-miR-19a-3p ANTXR1 -1.4 0.00391 -0.08 0.90778 MirTarget; mirMAP -0.39 6.0E-5 NA
11 hsa-miR-19b-3p ANTXR1 -1.39 0.00103 -0.08 0.90778 MirTarget -0.55 0 NA
12 hsa-miR-2110 ANTXR1 0.05 0.94584 -0.08 0.90778 mirMAP -0.32 3.0E-5 NA
13 hsa-miR-26b-3p ANTXR1 -0.62 0.04616 -0.08 0.90778 MirTarget -0.53 0.0007 NA
14 hsa-miR-29a-5p ANTXR1 -0.6 0.06643 -0.08 0.90778 MirTarget -0.36 0.01647 NA
15 hsa-miR-30b-5p ANTXR1 -0.68 0.07316 -0.08 0.90778 mirMAP -0.91 0 NA
16 hsa-miR-30c-1-3p ANTXR1 -0.91 0.05808 -0.08 0.90778 MirTarget -0.33 0.00195 NA
17 hsa-miR-30c-5p ANTXR1 -0.88 0.00777 -0.08 0.90778 mirMAP -0.61 3.0E-5 NA
18 hsa-miR-30d-5p ANTXR1 -0.01 0.97473 -0.08 0.90778 mirMAP -0.98 0 NA
19 hsa-miR-30e-5p ANTXR1 -0.99 0.00042 -0.08 0.90778 mirMAP -0.69 6.0E-5 NA
20 hsa-miR-324-5p ANTXR1 -0.99 0.00957 -0.08 0.90778 miRanda -0.61 0 NA
21 hsa-miR-335-3p ANTXR1 -0.5 0.22325 -0.08 0.90778 mirMAP -0.54 0 NA
22 hsa-miR-338-3p ANTXR1 0.51 0.34448 -0.08 0.90778 miRanda -0.33 0.00015 NA
23 hsa-miR-339-5p ANTXR1 -0.92 0.04335 -0.08 0.90778 miRanda -0.5 0 NA
24 hsa-miR-374a-5p ANTXR1 -0.77 0.02145 -0.08 0.90778 MirTarget; mirMAP -0.34 0.01815 NA
25 hsa-miR-374b-5p ANTXR1 -0.94 0.0014 -0.08 0.90778 MirTarget; mirMAP -0.57 0.00054 NA
26 hsa-miR-421 ANTXR1 -0.18 0.69194 -0.08 0.90778 miRanda -0.26 0.01962 NA
27 hsa-miR-425-5p ANTXR1 -0.82 0.05031 -0.08 0.90778 MirTarget -0.29 0.01247 NA
28 hsa-miR-495-3p ANTXR1 -0.82 0.09306 -0.08 0.90778 MirTarget -0.2 0.04876 NA
29 hsa-miR-543 ANTXR1 -1.03 0.07135 -0.08 0.90778 miRanda -0.18 0.03347 NA
30 hsa-miR-577 ANTXR1 0.81 0.31426 -0.08 0.90778 mirMAP -0.27 1.0E-5 NA
31 hsa-miR-590-3p ANTXR1 -0.92 0.03456 -0.08 0.90778 miRanda; mirMAP -0.61 0 NA
32 hsa-miR-592 ANTXR1 1.03 0.22889 -0.08 0.90778 mirMAP -0.29 1.0E-5 NA
33 hsa-miR-660-5p ANTXR1 -0.2 0.55612 -0.08 0.90778 mirMAP -0.86 0 NA
34 hsa-miR-664a-3p ANTXR1 -0.55 0.06802 -0.08 0.90778 mirMAP -0.73 1.0E-5 NA
35 hsa-miR-7-1-3p ANTXR1 -0.73 0.0834 -0.08 0.90778 mirMAP -0.62 0 NA
36 hsa-miR-154-3p ANTXR2 -0.64 0.23454 0.45 0.35344 mirMAP -0.22 0.0009 NA
37 hsa-miR-154-3p ANXA4 -0.64 0.23454 0.62 0.30853 MirTarget -0.33 7.0E-5 NA
38 hsa-let-7e-5p ARHGAP12 0.17 0.71379 0.37 0.2122 miRNATAP -0.11 0.01703 NA
39 hsa-let-7g-5p ARHGAP12 -0.81 0.01579 0.37 0.2122 miRNATAP -0.14 0.02808 NA
40 hsa-miR-126-5p ARHGAP12 -1.4 0.0002 0.37 0.2122 mirMAP -0.25 1.0E-5 NA
41 hsa-miR-128-3p ARHGAP12 0.03 0.92123 0.37 0.2122 miRNAWalker2 validate -0.13 0.04241 NA
42 hsa-miR-15a-5p ARHGAP12 -0.74 0.01074 0.37 0.2122 miRNATAP -0.24 0.00154 NA
43 hsa-miR-16-5p ARHGAP12 -1.02 0.00033 0.37 0.2122 miRNATAP -0.15 0.04448 NA
44 hsa-miR-301a-3p ARHGAP12 -0.76 0.09613 0.37 0.2122 miRNATAP -0.15 0.00123 NA
45 hsa-miR-339-5p ARHGAP12 -0.92 0.04335 0.37 0.2122 miRanda -0.19 6.0E-5 NA
46 hsa-miR-340-5p ARHGAP12 -0.87 0.0362 0.37 0.2122 miRNAWalker2 validate -0.18 0.00064 NA
47 hsa-miR-421 ARHGAP12 -0.18 0.69194 0.37 0.2122 PITA; miRanda; miRNATAP -0.19 5.0E-5 NA
48 hsa-miR-495-3p ARHGAP12 -0.82 0.09306 0.37 0.2122 mirMAP -0.11 0.0115 NA
49 hsa-miR-543 ARHGAP12 -1.03 0.07135 0.37 0.2122 miRanda; miRNATAP -0.12 0.00205 NA
50 hsa-miR-154-3p ARHGAP26 -0.64 0.23454 0.27 0.55575 TargetScan -0.21 0.00072 NA
51 hsa-miR-30a-5p ARL4A -0.59 0.17531 0.3 0.28653 MirTarget -0.13 0.00815 NA
52 hsa-miR-30c-5p ARL4A -0.88 0.00777 0.3 0.28653 MirTarget -0.13 0.03612 NA
53 hsa-miR-30e-5p ARL4A -0.99 0.00042 0.3 0.28653 MirTarget -0.15 0.04773 NA
54 hsa-miR-338-3p ARL4A 0.51 0.34448 0.3 0.28653 miRanda -0.13 0.00033 NA
55 hsa-miR-664a-3p ARL4A -0.55 0.06802 0.3 0.28653 mirMAP -0.18 0.00936 NA
56 hsa-miR-154-3p ASAP2 -0.64 0.23454 1.32 0.00158 MirTarget; TargetScan; miRNATAP -0.16 0.00524 NA
57 hsa-miR-107 ATG7 0.04 0.89912 -0.21 0.28676 miRanda -0.12 0.02741 NA
58 hsa-miR-154-3p ATL3 -0.64 0.23454 0.39 0.29173 MirTarget -0.14 0.00517 NA
59 hsa-miR-17-5p BTG1 -0.67 0.04231 -0.86 0.00431 TargetScan -0.14 0.04285 NA
60 hsa-miR-20a-5p BTG1 -0.39 0.26959 -0.86 0.00431 miRNATAP -0.14 0.0281 NA
61 hsa-miR-27a-3p BTG1 -0.61 0.09801 -0.86 0.00431 miRNATAP -0.14 0.0192 NA
62 hsa-miR-28-5p BTG1 -0.53 0.03042 -0.86 0.00431 miRanda -0.25 0.00873 NA
63 hsa-miR-16-2-3p C5orf24 -1.03 0.00735 -0.04 0.88805 mirMAP -0.2 4.0E-5 NA
64 hsa-miR-19a-3p C5orf24 -1.4 0.00391 -0.04 0.88805 mirMAP -0.16 3.0E-5 NA
65 hsa-miR-19b-3p C5orf24 -1.39 0.00103 -0.04 0.88805 mirMAP; miRNATAP -0.22 0 NA
66 hsa-miR-20a-5p C5orf24 -0.39 0.26959 -0.04 0.88805 mirMAP -0.14 0.01076 NA
67 hsa-miR-26b-5p C5orf24 -1.22 0.00085 -0.04 0.88805 mirMAP -0.16 0.00291 NA
68 hsa-miR-29a-3p C5orf24 -0.39 0.22665 -0.04 0.88805 miRNATAP -0.19 0.00146 NA
69 hsa-miR-29b-3p C5orf24 -0.39 0.34358 -0.04 0.88805 miRNATAP -0.17 0.00026 NA
70 hsa-miR-29c-3p C5orf24 -0.13 0.74361 -0.04 0.88805 miRNATAP -0.12 0.00919 NA
71 hsa-miR-374b-5p C5orf24 -0.94 0.0014 -0.04 0.88805 mirMAP -0.14 0.03084 NA
72 hsa-miR-590-3p C5orf24 -0.92 0.03456 -0.04 0.88805 mirMAP -0.13 0.00355 NA
73 hsa-miR-664a-3p C5orf24 -0.55 0.06802 -0.04 0.88805 mirMAP -0.15 0.01724 NA
74 hsa-miR-217 CCDC150 -1.53 0.33181 0.32 0.58012 miRanda -0.12 0 NA
75 hsa-miR-217 CDH13 -1.53 0.33181 0.38 0.49466 PITA; miRanda -0.11 2.0E-5 NA
76 hsa-miR-217 CDHR3 -1.53 0.33181 0.77 0.31392 miRanda; mirMAP -0.14 7.0E-5 NA
77 hsa-miR-148a-3p CDK5R1 -0.19 0.72463 -0.49 0.42264 MirTarget; miRNATAP -0.21 0.01129 NA
78 hsa-miR-152-3p CDK5R1 0.21 0.55837 -0.49 0.42264 MirTarget -0.3 0.02 NA
79 hsa-miR-196b-5p CDK5R1 1.33 0.19807 -0.49 0.42264 miRNAWalker2 validate -0.13 0.00272 NA
80 hsa-miR-199a-3p CDK5R1 -0.21 0.59945 -0.49 0.42264 MirTarget; miRNATAP -0.31 0.0052 NA
81 hsa-miR-199b-3p CDK5R1 -0.21 0.60097 -0.49 0.42264 MirTarget; miRNATAP -0.31 0.00516 NA
82 hsa-miR-28-5p CDK5R1 -0.53 0.03042 -0.49 0.42264 miRanda -0.74 8.0E-5 NA
83 hsa-miR-429 CDK5R1 1.86 0.00726 -0.49 0.42264 miRanda; miRNATAP -0.13 0.04015 NA
84 hsa-let-7a-3p CELF2 -0.95 0.00672 -1.75 0.00444 miRNATAP -0.35 0.00743 NA
85 hsa-let-7b-3p CELF2 -0.41 0.16777 -1.75 0.00444 miRNATAP -0.32 0.03921 NA
86 hsa-miR-106b-5p CELF2 -0.81 0.00943 -1.75 0.00444 miRNATAP -0.52 0.00034 NA
87 hsa-miR-141-3p CELF2 1.13 0.09667 -1.75 0.00444 mirMAP; miRNATAP -0.53 0 NA
88 hsa-miR-16-2-3p CELF2 -1.03 0.00735 -1.75 0.00444 mirMAP -0.31 0.01031 NA
89 hsa-miR-17-5p CELF2 -0.67 0.04231 -1.75 0.00444 TargetScan -0.39 0.00501 NA
90 hsa-miR-182-5p CELF2 0.19 0.7303 -1.75 0.00444 mirMAP; miRNATAP -0.5 0 NA
91 hsa-miR-183-5p CELF2 0.49 0.42168 -1.75 0.00444 miRNATAP -0.43 0 NA
92 hsa-miR-192-3p CELF2 1.99 0.00569 -1.75 0.00444 mirMAP; miRNATAP -0.42 0 NA
93 hsa-miR-196a-5p CELF2 2.84 0.01406 -1.75 0.00444 miRNATAP -0.21 0 NA
94 hsa-miR-196b-5p CELF2 1.33 0.19807 -1.75 0.00444 miRNATAP -0.18 3.0E-5 NA
95 hsa-miR-19b-1-5p CELF2 -0.14 0.71996 -1.75 0.00444 mirMAP -0.38 0.00156 NA
96 hsa-miR-200a-3p CELF2 1.69 0.00872 -1.75 0.00444 mirMAP -0.52 0 NA
97 hsa-miR-200b-3p CELF2 1.84 0.00297 -1.75 0.00444 TargetScan; mirMAP -0.58 0 NA
98 hsa-miR-200c-3p CELF2 1.56 0.01265 -1.75 0.00444 mirMAP; miRNATAP -0.54 0 NA
99 hsa-miR-200c-5p CELF2 0.2 0.74155 -1.75 0.00444 miRNATAP -0.32 0.00019 NA
100 hsa-miR-20a-5p CELF2 -0.39 0.26959 -1.75 0.00444 miRNATAP -0.4 0.00207 NA
101 hsa-miR-24-3p CELF2 -0.29 0.30773 -1.75 0.00444 miRNATAP -0.62 0.00017 NA
102 hsa-miR-30b-5p CELF2 -0.68 0.07316 -1.75 0.00444 mirMAP; miRNATAP -0.31 0.01103 NA
103 hsa-miR-30d-5p CELF2 -0.01 0.97473 -1.75 0.00444 mirMAP; miRNATAP -0.37 0.01822 NA
104 hsa-miR-31-5p CELF2 1.11 0.32092 -1.75 0.00444 mirMAP -0.16 9.0E-5 NA
105 hsa-miR-335-3p CELF2 -0.5 0.22325 -1.75 0.00444 mirMAP -0.29 0.0107 NA
106 hsa-miR-33a-5p CELF2 -0.99 0.06458 -1.75 0.00444 miRNATAP -0.31 0.00028 NA
107 hsa-miR-33b-5p CELF2 0.62 0.3293 -1.75 0.00444 miRNATAP -0.19 0.00853 NA
108 hsa-miR-34a-5p CELF2 -0.24 0.41696 -1.75 0.00444 miRNATAP -0.34 0.03006 NA
109 hsa-miR-425-5p CELF2 -0.82 0.05031 -1.75 0.00444 miRNAWalker2 validate; miRNATAP -0.38 0.00039 NA
110 hsa-miR-429 CELF2 1.86 0.00726 -1.75 0.00444 mirMAP; miRNATAP -0.52 0 NA
111 hsa-miR-455-5p CELF2 -0.23 0.54044 -1.75 0.00444 miRanda -0.52 2.0E-5 NA
112 hsa-miR-550a-3p CELF2 -0.17 0.74192 -1.75 0.00444 miRNATAP -0.3 0.00055 NA
113 hsa-miR-577 CELF2 0.81 0.31426 -1.75 0.00444 mirMAP -0.18 0.00183 NA
114 hsa-miR-615-3p CELF2 -0.64 0.40559 -1.75 0.00444 miRanda -0.21 0.00388 NA
115 hsa-miR-935 CELF2 0.47 0.63521 -1.75 0.00444 mirMAP -0.2 3.0E-5 NA
116 hsa-miR-96-5p CELF2 -0.14 0.83402 -1.75 0.00444 TargetScan; miRNATAP -0.48 0 NA
117 hsa-miR-154-3p CEP72 -0.64 0.23454 0.46 0.26709 MirTarget -0.2 0.00045 NA
118 hsa-miR-154-3p CHKA -0.64 0.23454 0.08 0.80532 MirTarget; TargetScan -0.17 0.00029 NA
119 hsa-miR-154-3p CHML -0.64 0.23454 -0.03 0.94106 mirMAP -0.12 0.01508 NA
120 hsa-miR-154-3p CIITA -0.64 0.23454 -1.97 0.0027 mirMAP -0.24 0.00786 NA
121 hsa-let-7a-3p CLOCK -0.95 0.00672 0.39 0.41591 MirTarget -0.38 0.00014 NA
122 hsa-miR-101-5p CLOCK -0.7 0.03679 0.39 0.41591 mirMAP -0.36 0.00062 NA
123 hsa-miR-103a-2-5p CLOCK -2.06 0.00116 0.39 0.41591 MirTarget -0.16 0.00482 NA
124 hsa-miR-126-5p CLOCK -1.4 0.0002 0.39 0.41591 mirMAP -0.24 0.01015 NA
125 hsa-miR-154-5p CLOCK -0.97 0.04875 0.39 0.41591 MirTarget -0.2 0.00542 NA
126 hsa-miR-15a-5p CLOCK -0.74 0.01074 0.39 0.41591 MirTarget -0.33 0.00702 NA
127 hsa-miR-16-2-3p CLOCK -1.03 0.00735 0.39 0.41591 MirTarget -0.3 0.00092 NA
128 hsa-miR-16-5p CLOCK -1.02 0.00033 0.39 0.41591 MirTarget -0.28 0.02124 NA
129 hsa-miR-19a-3p CLOCK -1.4 0.00391 0.39 0.41591 MirTarget -0.33 0 NA
130 hsa-miR-19b-3p CLOCK -1.39 0.00103 0.39 0.41591 MirTarget -0.42 0 NA
131 hsa-miR-20a-3p CLOCK -1.06 0.01854 0.39 0.41591 mirMAP -0.23 0.0023 NA
132 hsa-miR-20a-5p CLOCK -0.39 0.26959 0.39 0.41591 MirTarget -0.21 0.03502 NA
133 hsa-miR-2110 CLOCK 0.05 0.94584 0.39 0.41591 MirTarget; mirMAP -0.15 0.00708 NA
134 hsa-miR-26a-2-3p CLOCK -0.91 0.02835 0.39 0.41591 mirMAP -0.34 3.0E-5 NA
135 hsa-miR-26b-5p CLOCK -1.22 0.00085 0.39 0.41591 miRNAWalker2 validate -0.36 0.00014 NA
136 hsa-miR-30b-5p CLOCK -0.68 0.07316 0.39 0.41591 MirTarget -0.39 2.0E-5 NA
137 hsa-miR-30c-5p CLOCK -0.88 0.00777 0.39 0.41591 MirTarget -0.44 2.0E-5 NA
138 hsa-miR-340-5p CLOCK -0.87 0.0362 0.39 0.41591 MirTarget; mirMAP -0.34 4.0E-5 NA
139 hsa-miR-3613-5p CLOCK -1.57 0.00077 0.39 0.41591 miRNATAP -0.29 5.0E-5 NA
140 hsa-miR-374b-5p CLOCK -0.94 0.0014 0.39 0.41591 mirMAP -0.29 0.01601 NA
141 hsa-miR-376a-5p CLOCK -1.11 0.0539 0.39 0.41591 mirMAP -0.16 0.00898 NA
142 hsa-miR-377-3p CLOCK -1.31 0.02275 0.39 0.41591 MirTarget; mirMAP -0.12 0.04415 NA
143 hsa-miR-590-3p CLOCK -0.92 0.03456 0.39 0.41591 MirTarget; PITA; miRanda; mirMAP -0.23 0.00475 NA
144 hsa-miR-664a-3p CLOCK -0.55 0.06802 0.39 0.41591 mirMAP -0.45 0.00011 NA
145 hsa-miR-96-5p CLOCK -0.14 0.83402 0.39 0.41591 TargetScan -0.12 0.02172 NA
146 hsa-miR-130a-3p CNOT4 -1.17 0.00035 -0.05 0.76145 miRNATAP -0.11 0.00186 NA
147 hsa-miR-26b-5p CNOT4 -1.22 0.00085 -0.05 0.76145 miRNAWalker2 validate; miRNATAP -0.11 0.00052 NA
148 hsa-miR-450b-5p CNOT4 -0.95 0.01824 -0.05 0.76145 PITA -0.11 0.00011 NA
149 hsa-miR-217 COL24A1 -1.53 0.33181 0.23 0.77217 miRanda -0.12 0.00101 NA
150 hsa-miR-217 COX6B2 -1.53 0.33181 2.77 0.01635 miRanda -0.12 0.02171 NA

Over-represented Gene Ontology Biological Process

NumGOOverlapSizeP ValueAdj. P Value
1 POSITIVE REGULATION OF TRANSCRIPTION FROM RNA POLYMERASE II PROMOTER 22 1004 2.322e-08 0.0001081
2 CELL DEVELOPMENT 25 1426 1.712e-07 0.0003983
3 SKELETAL SYSTEM DEVELOPMENT 13 455 1.317e-06 0.002043
4 POSITIVE REGULATION OF GENE EXPRESSION 26 1733 1.831e-06 0.00213
5 APPENDAGE DEVELOPMENT 8 169 4.34e-06 0.003365
6 LIMB DEVELOPMENT 8 169 4.34e-06 0.003365
7 NEURON DIFFERENTIATION 17 874 5.595e-06 0.003719
8 REGULATION OF TRANSCRIPTION FROM RNA POLYMERASE II PROMOTER 25 1784 1.009e-05 0.005868
9 POSITIVE REGULATION OF BIOSYNTHETIC PROCESS 25 1805 1.235e-05 0.006384
10 SKELETAL SYSTEM MORPHOGENESIS 8 201 1.544e-05 0.007185
NumGOOverlapSizeP ValueAdj. P Value
1 RNA POLYMERASE II TRANSCRIPTION FACTOR ACTIVITY SEQUENCE SPECIFIC DNA BINDING 14 629 9.131e-06 0.008482
NumGOOverlapSizeP ValueAdj. P Value

Over-represented Pathway

NumPathwayPathviewOverlapSizeP ValueAdj. P Value
1 Phosphatidylinositol_signaling_system_hsa04070 4 99 0.002184 0.1135
2 Cellular_senescence_hsa04218 3 160 0.05838 1
3 Tight_junction_hsa04530 3 170 0.06745 1
4 TGF_beta_signaling_pathway_hsa04350 2 84 0.07814 1
5 Regulation_of_actin_cytoskeleton_hsa04810 3 208 0.1072 1
6 Cell_cycle_hsa04110 2 124 0.1489 1
7 Autophagy_animal_hsa04140 2 128 0.1566 1

lncRNA-mediated sponge

(Download full result)

Num lncRNA miRNAs           miRNAs count     Gene Sponge regulatory network lncRNA log2FC lncRNA pvalue Gene log2FC Gene pvalue lncRNA-gene Pearson correlation
1

HCG11

 hsa-let-7a-3p;hsa-let-7f-1-3p;hsa-miR-141-3p;hsa-miR-154-5p;hsa-miR-16-1-3p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-20a-3p;hsa-miR-24-1-5p;hsa-miR-27b-3p;hsa-miR-3065-5p;hsa-miR-320c;hsa-miR-340-5p;hsa-miR-3607-3p;hsa-miR-455-5p;hsa-miR-501-5p;hsa-miR-590-3p;hsa-miR-592;hsa-miR-7-1-3p 23 QKI Sponge network -0.31 0.48859 -0.91 0.01836 0.66
2

HCG11

 hsa-let-7a-3p;hsa-let-7f-1-3p;hsa-let-7f-2-3p;hsa-let-7g-5p;hsa-miR-103a-2-5p;hsa-miR-135b-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-18a-5p;hsa-miR-194-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-200c-5p;hsa-miR-27a-3p;hsa-miR-27b-3p;hsa-miR-3065-5p;hsa-miR-501-5p 17 MEF2C Sponge network -0.31 0.48859 -1.243 0.00722 0.653
3

RFPL1S

 hsa-let-7a-3p;hsa-let-7f-1-3p;hsa-miR-141-3p;hsa-miR-15b-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-194-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-200a-3p;hsa-miR-200b-3p;hsa-miR-20a-3p;hsa-miR-20a-5p;hsa-miR-222-3p;hsa-miR-224-3p;hsa-miR-224-5p;hsa-miR-26b-5p;hsa-miR-27a-3p;hsa-miR-27b-3p;hsa-miR-28-3p;hsa-miR-31-5p;hsa-miR-32-5p;hsa-miR-34a-5p;hsa-miR-429;hsa-miR-452-3p;hsa-miR-92a-3p;hsa-miR-96-5p 27 MAP1B Sponge network -0.457 0.43621 0.407 0.4776 0.621
4

RFPL1S

 hsa-let-7a-3p;hsa-miR-106b-5p;hsa-miR-141-3p;hsa-miR-16-2-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-192-3p;hsa-miR-196a-5p;hsa-miR-196b-5p;hsa-miR-200a-3p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-20a-5p;hsa-miR-24-3p;hsa-miR-31-5p;hsa-miR-33a-5p;hsa-miR-34a-5p;hsa-miR-429;hsa-miR-96-5p 20 CELF2 Sponge network -0.457 0.43621 -1.752 0.00444 0.595
5

RFPL1S

 hsa-let-7a-3p;hsa-let-7f-1-3p;hsa-let-7f-2-3p;hsa-let-7f-5p;hsa-let-7g-5p;hsa-miR-103a-2-5p;hsa-miR-135b-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-18a-5p;hsa-miR-194-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-27a-3p;hsa-miR-27b-3p;hsa-miR-429;hsa-miR-92a-3p;hsa-miR-940;hsa-miR-96-5p 19 MEF2C Sponge network -0.457 0.43621 -1.243 0.00722 0.582
6

HCG11

 hsa-let-7a-3p;hsa-miR-106b-5p;hsa-miR-141-3p;hsa-miR-16-2-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-192-3p;hsa-miR-19b-1-5p;hsa-miR-200a-3p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-200c-5p;hsa-miR-20a-5p;hsa-miR-455-5p 15 CELF2 Sponge network -0.31 0.48859 -1.752 0.00444 0.545
7

HCG11

 hsa-let-7a-3p;hsa-let-7g-3p;hsa-miR-194-3p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-26b-3p;hsa-miR-29a-5p;hsa-miR-590-3p;hsa-miR-592;hsa-miR-664a-3p;hsa-miR-7-1-3p 11 ANTXR1 Sponge network -0.31 0.48859 -0.076 0.90778 0.542
8

RFPL1S

 hsa-let-7a-3p;hsa-miR-130b-3p;hsa-miR-141-3p;hsa-miR-16-2-3p;hsa-miR-192-3p;hsa-miR-194-5p;hsa-miR-200a-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-200b-5p;hsa-miR-27b-3p;hsa-miR-32-5p;hsa-miR-429 13 KLF12 Sponge network -0.457 0.43621 -1.061 0.01138 0.523
9

RFPL1S

 hsa-let-7a-3p;hsa-let-7f-1-3p;hsa-miR-141-3p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-20a-3p;hsa-miR-24-1-5p;hsa-miR-27b-3p;hsa-miR-429;hsa-miR-93-3p;hsa-miR-96-5p 15 QKI Sponge network -0.457 0.43621 -0.91 0.01836 0.521
10

HCG11

 hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-194-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-200a-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-3607-3p;hsa-miR-362-3p;hsa-miR-590-3p;hsa-miR-592 13 MAF Sponge network -0.31 0.48859 -0.529 0.1715 0.499
11

CECR7

 hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-192-3p;hsa-miR-19b-1-5p;hsa-miR-200a-3p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-200c-5p;hsa-miR-30b-5p;hsa-miR-30d-5p;hsa-miR-33a-5p;hsa-miR-33b-5p;hsa-miR-425-5p;hsa-miR-429 15 CELF2 Sponge network -0.527 0.47624 -1.752 0.00444 0.475
12

CECR7

 hsa-let-7f-1-3p;hsa-let-7f-2-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-194-5p;hsa-miR-200c-5p;hsa-miR-27b-3p;hsa-miR-33b-5p;hsa-miR-425-5p;hsa-miR-429 10 MEF2C Sponge network -0.527 0.47624 -1.243 0.00722 0.474
13

HCG11

 hsa-let-7a-3p;hsa-miR-130b-3p;hsa-miR-141-3p;hsa-miR-16-2-3p;hsa-miR-192-3p;hsa-miR-194-5p;hsa-miR-19b-1-5p;hsa-miR-200a-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-200b-5p;hsa-miR-27b-3p;hsa-miR-362-3p 13 KLF12 Sponge network -0.31 0.48859 -1.061 0.01138 0.472
14

UCA1

 hsa-let-7d-5p;hsa-let-7g-5p;hsa-miR-126-5p;hsa-miR-130b-5p;hsa-miR-154-5p;hsa-miR-15a-5p;hsa-miR-16-5p;hsa-miR-186-5p;hsa-miR-3065-5p;hsa-miR-500a-5p;hsa-miR-582-5p;hsa-miR-590-3p;hsa-miR-7-1-3p 13 PGM2L1 Sponge network 1.481 0.28957 0.651 0.12319 0.463
15

HCG11

 hsa-miR-148b-3p;hsa-miR-16-2-3p;hsa-miR-26a-5p;hsa-miR-26b-5p;hsa-miR-29a-5p;hsa-miR-3065-5p;hsa-miR-3607-3p;hsa-miR-3613-3p;hsa-miR-590-3p;hsa-miR-664a-3p 10 INHBA Sponge network -0.31 0.48859 0.697 0.46069 0.431
16

FAM66C

 hsa-let-7b-3p;hsa-miR-15b-3p;hsa-miR-17-5p;hsa-miR-199b-5p;hsa-miR-200b-3p;hsa-miR-20a-5p;hsa-miR-224-3p;hsa-miR-224-5p;hsa-miR-25-3p;hsa-miR-27a-3p;hsa-miR-28-3p;hsa-miR-28-5p;hsa-miR-34a-5p;hsa-miR-452-3p;hsa-miR-452-5p;hsa-miR-92a-3p 16 MAP1B Sponge network -0.537 0.25424 0.407 0.4776 0.43
17

CECR7

 hsa-let-7f-1-3p;hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-20a-3p;hsa-miR-27b-3p;hsa-miR-30b-5p;hsa-miR-30d-5p;hsa-miR-425-5p;hsa-miR-429 11 QKI Sponge network -0.527 0.47624 -0.91 0.01836 0.424
18

HCG11

 hsa-miR-106b-5p;hsa-miR-141-3p;hsa-miR-181c-5p;hsa-miR-182-5p;hsa-miR-192-5p;hsa-miR-200a-3p;hsa-miR-26b-3p;hsa-miR-27b-3p;hsa-miR-3065-5p;hsa-miR-3613-3p;hsa-miR-362-5p;hsa-miR-590-3p;hsa-miR-592 13 RUNX1 Sponge network -0.31 0.48859 -0.227 0.61743 0.421
19

CECR7

 hsa-miR-130b-3p;hsa-miR-141-3p;hsa-miR-192-3p;hsa-miR-194-5p;hsa-miR-19b-1-5p;hsa-miR-200a-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-200b-5p;hsa-miR-27b-3p;hsa-miR-30b-5p;hsa-miR-30d-5p;hsa-miR-429 13 KLF12 Sponge network -0.527 0.47624 -1.061 0.01138 0.406
20

HCG11

 hsa-let-7g-3p;hsa-miR-15a-5p;hsa-miR-16-5p;hsa-miR-181c-5p;hsa-miR-183-5p;hsa-miR-186-5p;hsa-miR-191-5p;hsa-miR-194-5p;hsa-miR-26a-2-3p;hsa-miR-3065-5p;hsa-miR-340-5p;hsa-miR-3607-3p;hsa-miR-369-3p;hsa-miR-376a-3p;hsa-miR-590-3p;hsa-miR-7-1-3p 16 ENAH Sponge network -0.31 0.48859 -0.626 0.0421 0.403
21

EMX2OS

 hsa-miR-141-3p;hsa-miR-148a-3p;hsa-miR-182-5p;hsa-miR-194-5p;hsa-miR-200a-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-33a-5p;hsa-miR-33b-5p;hsa-miR-454-3p;hsa-miR-592 12 MAF Sponge network 0.959 0.25398 -0.529 0.1715 0.4
22

MIAT

 hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-192-3p;hsa-miR-200a-3p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-200c-5p;hsa-miR-33a-5p;hsa-miR-33b-5p;hsa-miR-96-5p 11 CELF2 Sponge network -1.324 0.06294 -1.752 0.00444 0.394
23

EGOT

 hsa-let-7d-5p;hsa-let-7g-5p;hsa-miR-107;hsa-miR-15a-5p;hsa-miR-16-5p;hsa-miR-186-5p;hsa-miR-296-5p;hsa-miR-29a-5p;hsa-miR-29b-3p;hsa-miR-421;hsa-miR-501-3p 11 ONECUT2 Sponge network -1.196 0.1622 2.089 0.02513 0.382
24 HAR1A hsa-miR-15b-3p;hsa-miR-181a-5p;hsa-miR-181b-5p;hsa-miR-200b-3p;hsa-miR-200c-5p;hsa-miR-222-3p;hsa-miR-224-3p;hsa-miR-224-5p;hsa-miR-25-3p;hsa-miR-27a-3p;hsa-miR-28-3p;hsa-miR-28-5p 12 MAP1B Sponge network -0.143 0.85455 0.407 0.4776 0.367
25

EGOT

 hsa-let-7d-5p;hsa-let-7g-5p;hsa-miR-139-5p;hsa-miR-154-5p;hsa-miR-15a-5p;hsa-miR-16-5p;hsa-miR-186-5p;hsa-miR-301a-3p;hsa-miR-369-3p;hsa-miR-7-1-3p 10 PGM2L1 Sponge network -1.196 0.1622 0.651 0.12319 0.365
26

HCG11

 hsa-let-7a-3p;hsa-let-7f-1-3p;hsa-miR-141-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-194-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-200a-3p;hsa-miR-200b-3p;hsa-miR-200c-5p;hsa-miR-20a-3p;hsa-miR-20a-5p;hsa-miR-222-3p;hsa-miR-26b-5p;hsa-miR-27a-3p;hsa-miR-27b-3p;hsa-miR-455-5p;hsa-miR-590-3p 19 MAP1B Sponge network -0.31 0.48859 0.407 0.4776 0.358
27

EMX2OS

 hsa-let-7f-1-3p;hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-20a-3p;hsa-miR-24-1-5p;hsa-miR-3065-5p;hsa-miR-425-5p;hsa-miR-592;hsa-miR-7-1-3p;hsa-miR-93-3p 12 QKI Sponge network 0.959 0.25398 -0.91 0.01836 0.351
28

UCA1

 hsa-miR-15a-5p;hsa-miR-16-5p;hsa-miR-186-5p;hsa-miR-191-5p;hsa-miR-3065-5p;hsa-miR-340-5p;hsa-miR-374a-5p;hsa-miR-374b-5p;hsa-miR-590-3p;hsa-miR-590-5p;hsa-miR-7-1-3p 11 ENAH Sponge network 1.481 0.28957 -0.626 0.0421 0.343
29

PART1

 hsa-let-7b-3p;hsa-miR-15b-3p;hsa-miR-17-5p;hsa-miR-181a-5p;hsa-miR-181b-5p;hsa-miR-199b-5p;hsa-miR-20a-5p;hsa-miR-222-3p;hsa-miR-224-3p;hsa-miR-224-5p;hsa-miR-25-3p;hsa-miR-27a-3p;hsa-miR-28-3p;hsa-miR-28-5p;hsa-miR-31-5p;hsa-miR-34a-5p;hsa-miR-452-3p;hsa-miR-92a-3p 18 MAP1B Sponge network 2.634 0.03419 0.407 0.4776 0.334
30

RFPL1S

 hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-194-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-200a-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-33a-5p;hsa-miR-429;hsa-miR-96-5p 12 MAF Sponge network -0.457 0.43621 -0.529 0.1715 0.331
31

EMX2OS

 hsa-let-7f-1-3p;hsa-let-7g-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-18a-3p;hsa-miR-194-5p;hsa-miR-200c-5p;hsa-miR-3065-5p;hsa-miR-33b-5p;hsa-miR-425-5p;hsa-miR-940 11 MEF2C Sponge network 0.959 0.25398 -1.243 0.00722 0.326
32

AGAP11

 hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-192-3p;hsa-miR-196a-5p;hsa-miR-200a-3p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-200c-5p;hsa-miR-30d-5p;hsa-miR-455-5p;hsa-miR-550a-3p 12 CELF2 Sponge network -0.834 0.15213 -1.752 0.00444 0.319
33

MIAT

 hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-194-5p;hsa-miR-200a-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-33a-5p;hsa-miR-33b-5p;hsa-miR-96-5p 10 MAF Sponge network -1.324 0.06294 -0.529 0.1715 0.309
34

CECR7

 hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-194-5p;hsa-miR-200a-3p;hsa-miR-200a-5p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-30b-5p;hsa-miR-30d-5p;hsa-miR-33a-5p;hsa-miR-33b-5p;hsa-miR-429 12 MAF Sponge network -0.527 0.47624 -0.529 0.1715 0.304
35

HCG11

 hsa-let-7a-3p;hsa-miR-101-5p;hsa-miR-103a-2-5p;hsa-miR-154-5p;hsa-miR-15a-5p;hsa-miR-16-2-3p;hsa-miR-16-5p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-20a-5p;hsa-miR-26a-2-3p;hsa-miR-26b-5p;hsa-miR-340-5p;hsa-miR-590-3p;hsa-miR-664a-3p 16 CLOCK Sponge network -0.31 0.48859 0.385 0.41591 0.294
36

EMX2OS

 hsa-miR-106b-5p;hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-192-3p;hsa-miR-200a-3p;hsa-miR-200b-3p;hsa-miR-200c-3p;hsa-miR-200c-5p;hsa-miR-33a-5p;hsa-miR-33b-5p;hsa-miR-425-5p 12 CELF2 Sponge network 0.959 0.25398 -1.752 0.00444 0.28
37

HCG11

 hsa-miR-16-2-3p;hsa-miR-19a-3p;hsa-miR-19b-3p;hsa-miR-20a-5p;hsa-miR-26b-5p;hsa-miR-29a-3p;hsa-miR-29b-3p;hsa-miR-29c-3p;hsa-miR-590-3p;hsa-miR-664a-3p 10 C5orf24 Sponge network -0.31 0.48859 -0.037 0.88805 0.279
38

UCA1

 hsa-miR-107;hsa-miR-154-5p;hsa-miR-16-1-3p;hsa-miR-3065-5p;hsa-miR-340-5p;hsa-miR-374b-5p;hsa-miR-455-5p;hsa-miR-500a-5p;hsa-miR-501-5p;hsa-miR-582-5p;hsa-miR-590-3p;hsa-miR-7-1-3p 12 QKI Sponge network 1.481 0.28957 -0.91 0.01836 0.278
39

KCNQ1OT1

 hsa-miR-107;hsa-miR-126-5p;hsa-miR-15a-5p;hsa-miR-16-5p;hsa-miR-185-3p;hsa-miR-186-5p;hsa-miR-296-5p;hsa-miR-29a-5p;hsa-miR-29b-1-5p;hsa-miR-421;hsa-miR-501-3p;hsa-miR-576-5p;hsa-miR-590-3p;hsa-miR-671-5p 14 ONECUT2 Sponge network 0.495 0.30013 2.089 0.02513 0.278
40

KCNQ1OT1

 hsa-let-7e-5p;hsa-miR-126-5p;hsa-miR-128-3p;hsa-miR-15a-5p;hsa-miR-16-5p;hsa-miR-301a-3p;hsa-miR-340-5p;hsa-miR-421;hsa-miR-495-3p;hsa-miR-543 10 ARHGAP12 Sponge network 0.495 0.30013 0.366 0.2122 0.277
41

KCNQ1OT1

 hsa-miR-126-5p;hsa-miR-16-5p;hsa-miR-323a-3p;hsa-miR-340-5p;hsa-miR-421;hsa-miR-486-5p;hsa-miR-543;hsa-miR-590-3p;hsa-miR-616-5p;hsa-miR-98-5p 10 LMO7 Sponge network 0.495 0.30013 1.349 0.00406 0.275
42

FAM66C

 hsa-let-7b-3p;hsa-miR-17-5p;hsa-miR-192-3p;hsa-miR-196a-5p;hsa-miR-196b-5p;hsa-miR-200b-3p;hsa-miR-20a-5p;hsa-miR-34a-5p;hsa-miR-425-5p;hsa-miR-615-3p 10 CELF2 Sponge network -0.537 0.25424 -1.752 0.00444 0.27
43 DGCR5 hsa-miR-15b-3p;hsa-miR-17-5p;hsa-miR-181a-5p;hsa-miR-181b-5p;hsa-miR-194-5p;hsa-miR-20a-5p;hsa-miR-222-3p;hsa-miR-224-5p;hsa-miR-25-3p;hsa-miR-27a-3p;hsa-miR-28-3p;hsa-miR-28-5p;hsa-miR-31-5p 13 MAP1B Sponge network -0.328 0.65499 0.407 0.4776 0.264
44

CECR7

 hsa-let-7f-1-3p;hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-194-5p;hsa-miR-200a-3p;hsa-miR-200b-3p;hsa-miR-200c-5p;hsa-miR-20a-3p;hsa-miR-222-3p;hsa-miR-224-5p;hsa-miR-27b-3p;hsa-miR-429 12 MAP1B Sponge network -0.527 0.47624 0.407 0.4776 0.256

Quest ID: eedb1f914b94cb9cf6672c3076bf3292