Browse BIRC2

Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Basic function annotation.
> Subcellular Location, Domain and Function
> Gene Ontology
> KEGG and Reactome Pathway
> Subcellular Location, Domain and Function
 
Subcellular Location Cytoplasm. Nucleus. Note=Agents that induce either the extrinsic or intrinsic apoptotic pathways promote its redistribution from the nuclear compartment to the cytoplasmic compartment. Associated with the midbody in telophase cells, and found diffusely in the nucleus of interphase cells.
Domain PF00653 Inhibitor of Apoptosis domain
PF00619 Caspase recruitment domain
Function

Multi-functional protein which regulates not only caspases and apoptosis, but also modulates inflammatory signaling and immunity, mitogenic kinase signaling, and cell proliferation, as well as cell invasion and metastasis. Acts as an E3 ubiquitin-protein ligase regulating NF-kappa-B signaling and regulates both canonical and non-canonical NF-kappa-B signaling by acting in opposite directions: acts as a positive regulator of the canonical pathway and suppresses constitutive activation of non-canonical NF-kappa-B signaling. The target proteins for its E3 ubiquitin-protein ligase activity include: RIPK1, RIPK2, RIPK3, RIPK4, CASP3, CASP7, CASP8, TRAF2, DIABLO/SMAC, MAP3K14/NIK, MAP3K5/ASK1, IKBKG/NEMO, IKBKE and MXD1/MAD1. Can also function as an E3 ubiquitin-protein ligase of the NEDD8 conjugation pathway, targeting effector caspases for neddylation and inactivation. Acts as an important regulator of innate immune signaling via regulation of Toll-like receptors (TLRs), Nodlike receptors (NLRs) and RIG-I like receptors (RLRs), collectively referred to as pattern recognition receptors (PRRs). Protects cells from spontaneous formation of the ripoptosome, a large multi-protein complex that has the capability to kill cancer cells in a caspase-dependent and caspase-independent manner. Suppresses ripoptosome formation by ubiquitinating RIPK1 and CASP8. Can stimulate the transcriptional activity of E2F1. Plays a role in the modulation of the cell cycle.

> Gene Ontology
 
Biological Process GO:0000209 protein polyubiquitination
GO:0001666 response to hypoxia
GO:0001819 positive regulation of cytokine production
GO:0001890 placenta development
GO:0001959 regulation of cytokine-mediated signaling pathway
GO:0002218 activation of innate immune response
GO:0002221 pattern recognition receptor signaling pathway
GO:0002224 toll-like receptor signaling pathway
GO:0002697 regulation of immune effector process
GO:0002753 cytoplasmic pattern recognition receptor signaling pathway
GO:0002756 MyD88-independent toll-like receptor signaling pathway
GO:0002757 immune response-activating signal transduction
GO:0002758 innate immune response-activating signal transduction
GO:0002764 immune response-regulating signaling pathway
GO:0002831 regulation of response to biotic stimulus
GO:0006513 protein monoubiquitination
GO:0006921 cellular component disassembly involved in execution phase of apoptosis
GO:0007249 I-kappaB kinase/NF-kappaB signaling
GO:0009615 response to virus
GO:0010466 negative regulation of peptidase activity
GO:0010498 proteasomal protein catabolic process
GO:0010803 regulation of tumor necrosis factor-mediated signaling pathway
GO:0010939 regulation of necrotic cell death
GO:0010951 negative regulation of endopeptidase activity
GO:0010955 negative regulation of protein processing
GO:0014074 response to purine-containing compound
GO:0016485 protein processing
GO:0030522 intracellular receptor signaling pathway
GO:0031333 negative regulation of protein complex assembly
GO:0031349 positive regulation of defense response
GO:0031396 regulation of protein ubiquitination
GO:0031398 positive regulation of protein ubiquitination
GO:0033209 tumor necrosis factor-mediated signaling pathway
GO:0034121 regulation of toll-like receptor signaling pathway
GO:0034612 response to tumor necrosis factor
GO:0035666 TRIF-dependent toll-like receptor signaling pathway
GO:0035872 nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
GO:0036293 response to decreased oxygen levels
GO:0038061 NIK/NF-kappaB signaling
GO:0039528 cytoplasmic pattern recognition receptor signaling pathway in response to virus
GO:0039529 RIG-I signaling pathway
GO:0039531 regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway
GO:0039535 regulation of RIG-I signaling pathway
GO:0043122 regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043254 regulation of protein complex assembly
GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043900 regulation of multi-organism process
GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism
GO:0045088 regulation of innate immune response
GO:0045089 positive regulation of innate immune response
GO:0045471 response to ethanol
GO:0045861 negative regulation of proteolysis
GO:0046683 response to organophosphorus
GO:0048608 reproductive structure development
GO:0050688 regulation of defense response to virus
GO:0050727 regulation of inflammatory response
GO:0050792 regulation of viral process
GO:0051259 protein oligomerization
GO:0051291 protein heterooligomerization
GO:0051346 negative regulation of hydrolase activity
GO:0051591 response to cAMP
GO:0051604 protein maturation
GO:0051607 defense response to virus
GO:0052547 regulation of peptidase activity
GO:0052548 regulation of endopeptidase activity
GO:0060544 regulation of necroptotic process
GO:0060546 negative regulation of necroptotic process
GO:0060547 negative regulation of necrotic cell death
GO:0060759 regulation of response to cytokine stimulus
GO:0061458 reproductive system development
GO:0070265 necrotic cell death
GO:0070266 necroptotic process
GO:0070423 nucleotide-binding oligomerization domain containing signaling pathway
GO:0070424 regulation of nucleotide-binding oligomerization domain containing signaling pathway
GO:0070482 response to oxygen levels
GO:0070534 protein K63-linked ubiquitination
GO:0070613 regulation of protein processing
GO:0070936 protein K48-linked ubiquitination
GO:0071356 cellular response to tumor necrosis factor
GO:0072593 reactive oxygen species metabolic process
GO:0097194 execution phase of apoptosis
GO:0097300 programmed necrotic cell death
GO:0097305 response to alcohol
GO:0097340 inhibition of cysteine-type endopeptidase activity
GO:0097341 zymogen inhibition
GO:0097343 ripoptosome assembly
GO:0098542 defense response to other organism
GO:0098586 cellular response to virus
GO:1900044 regulation of protein K63-linked ubiquitination
GO:1901026 ripoptosome assembly involved in necroptotic process
GO:1902442 regulation of ripoptosome assembly involved in necroptotic process
GO:1902443 negative regulation of ripoptosome assembly involved in necroptotic process
GO:1902523 positive regulation of protein K63-linked ubiquitination
GO:1902524 positive regulation of protein K48-linked ubiquitination
GO:1902525 regulation of protein monoubiquitination
GO:1902527 positive regulation of protein monoubiquitination
GO:1902914 regulation of protein polyubiquitination
GO:1902916 positive regulation of protein polyubiquitination
GO:1903317 regulation of protein maturation
GO:1903318 negative regulation of protein maturation
GO:1903320 regulation of protein modification by small protein conjugation or removal
GO:1903322 positive regulation of protein modification by small protein conjugation or removal
GO:1990001 inhibition of cysteine-type endopeptidase activity involved in apoptotic process
GO:2000116 regulation of cysteine-type endopeptidase activity
GO:2000117 negative regulation of cysteine-type endopeptidase activity
GO:2000377 regulation of reactive oxygen species metabolic process
Molecular Function GO:0003713 transcription coactivator activity
GO:0004842 ubiquitin-protein transferase activity
GO:0004857 enzyme inhibitor activity
GO:0004866 endopeptidase inhibitor activity
GO:0004869 cysteine-type endopeptidase inhibitor activity
GO:0016874 ligase activity
GO:0019787 ubiquitin-like protein transferase activity
GO:0030414 peptidase inhibitor activity
GO:0032182 ubiquitin-like protein binding
GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043028 cysteine-type endopeptidase regulator activity involved in apoptotic process
GO:0043130 ubiquitin binding
GO:0047485 protein N-terminus binding
GO:0061134 peptidase regulator activity
GO:0061135 endopeptidase regulator activity
GO:0098770 FBXO family protein binding
Cellular Component GO:0000803 sex chromosome
GO:0001741 XY body
GO:0009898 cytoplasmic side of plasma membrane
GO:0035631 CD40 receptor complex
GO:0043235 receptor complex
GO:0045121 membrane raft
GO:0098552 side of membrane
GO:0098562 cytoplasmic side of membrane
GO:0098589 membrane region
GO:0098802 plasma membrane receptor complex
GO:0098857 membrane microdomain
> KEGG and Reactome Pathway
 
KEGG hsa04064 NF-kappa B signaling pathway
hsa04120 Ubiquitin mediated proteolysis
hsa04210 Apoptosis
hsa04390 Hippo signaling pathway
hsa04510 Focal adhesion
hsa04621 NOD-like receptor signaling pathway
hsa04668 TNF signaling pathway
Reactome R-HSA-166054: Activated TLR4 signalling
R-HSA-109581: Apoptosis
R-HSA-111465: Apoptotic cleavage of cellular proteins
R-HSA-75153: Apoptotic execution phase
R-HSA-1280215: Cytokine Signaling in Immune system
R-HSA-73887: Death Receptor Signalling
R-HSA-5688426: Deubiquitination
R-HSA-937041: IKK complex recruitment mediated by RIP1
R-HSA-168256: Immune System
R-HSA-168249: Innate Immune System
R-HSA-392499: Metabolism of proteins
R-HSA-166166: MyD88-independent TLR3/TLR4 cascade
R-HSA-168638: NOD1/2 Signaling Pathway
R-HSA-168643: Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
R-HSA-597592: Post-translational protein modification
R-HSA-5357801: Programmed Cell Death
R-HSA-5213460: RIPK1-mediated regulated necrosis
R-HSA-5218859: Regulated Necrosis
R-HSA-5357905: Regulation of TNFR1 signaling
R-HSA-5675482: Regulation of necroptotic cell death
R-HSA-162582: Signal Transduction
R-HSA-5676594: TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
R-HSA-75893: TNF signaling
R-HSA-5357956: TNFR1-induced NFkappaB signaling pathway
R-HSA-5668541: TNFR2 non-canonical NF-kB pathway
R-HSA-937061: TRIF-mediated TLR3/TLR4 signaling
R-HSA-168164: Toll Like Receptor 3 (TLR3) Cascade
R-HSA-166016: Toll Like Receptor 4 (TLR4) Cascade
R-HSA-168898: Toll-Like Receptors Cascades
R-HSA-5689880: Ub-specific processing proteases
Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Literatures that report relations between BIRC2 and anti-tumor immunity. The specific mechanism were also collected if the literature reports that a gene specifically promotes or inhibits the infiltration or function of T/NK cells.
> Text Mining
 
  Literatures describing the relation between BIRC2 and anti-tumor immunity in human cancer.
PMID Cancer type Relation to immunity Evidence sentences
21282461Bladder CarcinomaInhibit immunityDegradation of the RIP1 K63 ubiquitin ligases cIAP1/2 amplifies the CD40-mediated cytotoxic effect, whereas inhibition of CYLD, a RIP1 K63 deubiquitinating enzyme, reduces it.
Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content High-throughput screening data (e.g. CRISPR-Cas9, shRNA and RNAi) for T cell-mediated killing. Genetic screen techniques can identify mechanisms of tumor cell resistance (e.g., PTPN2) and sensitivity (e.g., APLNR) to killing by cytotoxic T cells, the central effectors of anti-tumor immunity. After comprehensively searching, eight groups of screening data sets were collected in the current database. In this tab, users can check whether their selected genes cause resistance or increase sensitivity to T cell-mediated killing in various data sets.
> High-throughput Screening
  Statistical results of BIRC2 in screening data sets for detecting immune reponses.
PMID Screening System Cancer Type Cell Line Data Set Statistical Results Relation to immunity
29301958CRISPR-Cas9 melanomaB16F10Pmel-1 T cell logFC: -2.28; FDR: 0.02860 Resistant to T cell-mediated killing
29301958CRISPR-Cas9 melanomaB16F10OT-1 T cell logFC: -2.49; FDR: 0.01650 Resistant to T cell-mediated killing
28783722CRISPR-Cas9 melanomaMel6242CT-CRISPR NA/NS NA/NS
28723893CRISPR-Cas9 melanomaB16GVAX+Anti-PD1 STARS Score: 6.26; FDR: 0.000 Resistant to T cell-mediated killing
28723893CRISPR-Cas9 melanomaB16GVAX STARS Score: 6.48; FDR: 0.001 Resistant to T cell-mediated killing
25691366RNAiBreast cancerMCF7Luc-CTL assay NA/NS NA/NS
24476824shRNAmelanomaB16Primary screen NA/NS NA/NS
24476824shRNAmelanomaB16Secondary screen NA/NS NA/NS
Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Transcriptomic and genomic profiling of pre-treated tumor biopsies from responders and non-responders to immunotherapy. These data were used to identify signatures and mechanisms of response to checkpoint blockade (e.g., anti-PDL1 and anti-PD1). One example is that mutations in the gene PBRM1 benefit clinical survival of patients with clear cell renal cell carcinoma. After comprehensively searching, we collected 5 and 6 of transcriptomic and genomic data sets, respectively. In this tab, users can check whether their selected genes have significant difference of expression or mutation between responders and non-responders in various data sets.
> Expression difference between responders and non-responders
> Mutation difference between responders and non-responders
> Expression difference between responders and non-responders
 
Points in the above scatter plot represent the expression difference of BIRC2 in various data sets.
No PMID Cancer type Group Drug # Res # NRes Log2 (Fold Change) P value Anno
126997480MelanomaallAnti-PD-1 (pembrolizumab and nivolumab)1412-0.7960.116
226997480MelanomaMAPKiAnti-PD-1 (pembrolizumab and nivolumab)65-1.0950.615
326997480Melanomanon-MAPKiAnti-PD-1 (pembrolizumab and nivolumab)87-0.5770.72
428552987Urothelial cancerallAnti-PD-L1 (atezolizumab) 916-0.0730.813
528552987Urothelial cancersmokingAnti-PD-L1 (atezolizumab) 59-0.2250.902
628552987Urothelial cancernon-smokingAnti-PD-L1 (atezolizumab) 470.1220.959
729033130MelanomaallAnti-PD-1 (nivolumab) 2623-0.4590.312
829033130MelanomaNIV3-PROGAnti-PD-1 (nivolumab) 1511-0.1430.937
929033130MelanomaNIV3-NAIVEAnti-PD-1 (nivolumab) 1112-0.7680.694
1029301960Clear cell renal cell carcinoma (ccRCC)allAnti-PD-1 (nivolumab) 480.4980.737
1129301960Clear cell renal cell carcinoma (ccRCC)VEGFRiAnti-PD-1 (nivolumab) 2001
1229301960Clear cell renal cell carcinoma (ccRCC)non-VEGFRiAnti-PD-1 (nivolumab) 280.7250.754
1329443960Urothelial cancerallAnti-PD-L1 (atezolizumab) 68230-0.0920.115
> Mutation difference between responders and non-responders
 
Points in the above scatter plot represent the mutation difference of BIRC2 in various data sets.
No PMID Cancer type Group Drug # Res # NRes % Mut/Res % Mut/NRes % Diff (R vs NR) Pval Anno
125765070Non-small cell lung cancer (NSCLC)allAnti-PD-1 (pembrolizumab) 14170001
225765070Non-small cell lung cancer (NSCLC)smokingAnti-PD-1 (pembrolizumab) 1030001
325765070Non-small cell lung cancer (NSCLC)non-smokingAnti-PD-1 (pembrolizumab) 4140001
426359337MelanomaallAnti-CTLA-4 (ipilimumab) 27733.72.711
526359337MelanomaBRAFiAnti-CTLA-4 (ipilimumab) 0140001
626359337Melanomanon-BRAFiAnti-CTLA-4 (ipilimumab) 27593.73.40.31
726997480MelanomaallAnti-PD-1 (pembrolizumab and nivolumab)21170001
826997480MelanomaMAPKiAnti-PD-1 (pembrolizumab and nivolumab)860001
926997480Melanomanon-MAPKiAnti-PD-1 (pembrolizumab and nivolumab)13110001
1028552987Urothelial cancerallAnti-PD-L1 (atezolizumab) 9160001
1128552987Urothelial cancersmokingAnti-PD-L1 (atezolizumab) 590001
1228552987Urothelial cancernon-smokingAnti-PD-L1 (atezolizumab) 470001
1329033130MelanomaallAnti-PD-1 (nivolumab) 38270001
1429033130MelanomaNIV3-PROGAnti-PD-1 (nivolumab) 22130001
1529033130MelanomaNIV3-NAIVEAnti-PD-1 (nivolumab) 16140001
1629301960Clear cell renal cell carcinoma (ccRCC)allAnti-PD-1 (nivolumab) 11130001
1729301960Clear cell renal cell carcinoma (ccRCC)VEGFRiAnti-PD-1 (nivolumab) 610001
1829301960Clear cell renal cell carcinoma (ccRCC)non-VEGFRiAnti-PD-1 (nivolumab) 5120001
Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Relations between abundance of tumor-infiltrating lymphocytes (TILs) and expression, copy number, methylation, or mutation of BIRC2. The immune-related signatures of 28 TIL types from Charoentong's study, which can be viewed in the download page. For each cancer type, the relative abundance of TILs were inferred by using gene set variation analysis (GSVA) based on gene expression profile. In this tab, users can examine which kinds of TILs might be regulated by the current gene.
> Lymphocyte
 
Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Relations between three kinds of immunomodulators and expression, copy number, methylation, or mutation of BIRC2. These immunomo-dulators were collected from Charoentong's study. In this tab, users can examine which immunomodulators might be regulated by BIRC2.
> Immunoinhibitor
> Immunostimulator
> MHC molecule
> Immunoinhibitor
 
> Immunostimulator
 
> MHC molecule
 
Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Relations between chemokines (or receptors) and expression, copy number, methylation, or mutation of BIRC2. In this tab, users can examine which chemokines (or receptors) might be regulated by the current gene.
> Chemokine
> Receptor
> Chemokine
 
> Receptor
 
Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Distribution of BIRC2 expression across immune and molecular subtypes.
> Immune subtype
> Molecular subtype
> Immune subtype
 
> Molecular subtype
 
Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Associations between BIRC2 and clinical features.
> Overall survival analysis
> Cancer stage
> Tumor grade
> Overall survival
 
> Stage
 
> Grade
 
Summary
SymbolBIRC2
Namebaculoviral IAP repeat containing 2
Aliases cIAP1; hiap-2; MIHB; RNF48; c-IAP1; NFR2-TRAF signalling complex protein; apoptosis inhibitor 1; API1; bacul ......
Chromosomal Location11q22
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Drugs targeting BIRC2 collected from DrugBank database.
> Drugs from DrugBank database
 

There is no record.