Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Basic function annotation. > Subcellular Location, Domain and Function > Gene Ontology > KEGG and Reactome Pathway |
Subcellular Location | Secreted. |
Domain |
PF00143 Interferon alpha/beta domain |
Function |
Has antiviral, antibacterial and anticancer activities. |
Biological Process |
GO:0001818 negative regulation of cytokine production GO:0001959 regulation of cytokine-mediated signaling pathway GO:0002250 adaptive immune response GO:0002263 cell activation involved in immune response GO:0002285 lymphocyte activation involved in immune response GO:0002286 T cell activation involved in immune response GO:0002312 B cell activation involved in immune response GO:0002323 natural killer cell activation involved in immune response GO:0002366 leukocyte activation involved in immune response GO:0002367 cytokine production involved in immune response GO:0002369 T cell cytokine production GO:0002440 production of molecular mediator of immune response GO:0002443 leukocyte mediated immunity GO:0002449 lymphocyte mediated immunity GO:0002456 T cell mediated immunity GO:0002460 adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002521 leukocyte differentiation GO:0002683 negative regulation of immune system process GO:0002694 regulation of leukocyte activation GO:0002695 negative regulation of leukocyte activation GO:0002697 regulation of immune effector process GO:0002698 negative regulation of immune effector process GO:0002700 regulation of production of molecular mediator of immune response GO:0002701 negative regulation of production of molecular mediator of immune response GO:0002703 regulation of leukocyte mediated immunity GO:0002704 negative regulation of leukocyte mediated immunity GO:0002706 regulation of lymphocyte mediated immunity GO:0002707 negative regulation of lymphocyte mediated immunity GO:0002709 regulation of T cell mediated immunity GO:0002710 negative regulation of T cell mediated immunity GO:0002718 regulation of cytokine production involved in immune response GO:0002719 negative regulation of cytokine production involved in immune response GO:0002724 regulation of T cell cytokine production GO:0002725 negative regulation of T cell cytokine production GO:0002819 regulation of adaptive immune response GO:0002820 negative regulation of adaptive immune response GO:0002822 regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002823 negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002828 regulation of type 2 immune response GO:0002829 negative regulation of type 2 immune response GO:0006959 humoral immune response GO:0007159 leukocyte cell-cell adhesion GO:0007162 negative regulation of cell adhesion GO:0007259 JAK-STAT cascade GO:0007596 blood coagulation GO:0007599 hemostasis GO:0009615 response to virus GO:0018105 peptidyl-serine phosphorylation GO:0018209 peptidyl-serine modification GO:0019058 viral life cycle GO:0019079 viral genome replication GO:0022407 regulation of cell-cell adhesion GO:0022408 negative regulation of cell-cell adhesion GO:0030098 lymphocyte differentiation GO:0030101 natural killer cell activation GO:0030183 B cell differentiation GO:0030217 T cell differentiation GO:0031349 positive regulation of defense response GO:0031960 response to corticosteroid GO:0032943 mononuclear cell proliferation GO:0033135 regulation of peptidyl-serine phosphorylation GO:0033138 positive regulation of peptidyl-serine phosphorylation GO:0033139 regulation of peptidyl-serine phosphorylation of STAT protein GO:0033141 positive regulation of peptidyl-serine phosphorylation of STAT protein GO:0034340 response to type I interferon GO:0035456 response to interferon-beta GO:0035458 cellular response to interferon-beta GO:0035743 CD4-positive, alpha-beta T cell cytokine production GO:0035745 T-helper 2 cell cytokine production GO:0042092 type 2 immune response GO:0042100 B cell proliferation GO:0042110 T cell activation GO:0042113 B cell activation GO:0042501 serine phosphorylation of STAT protein GO:0042742 defense response to bacterium GO:0043330 response to exogenous dsRNA GO:0043331 response to dsRNA GO:0043900 regulation of multi-organism process GO:0043901 negative regulation of multi-organism process GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism GO:0045069 regulation of viral genome replication GO:0045071 negative regulation of viral genome replication GO:0045088 regulation of innate immune response GO:0045089 positive regulation of innate immune response GO:0045341 MHC class I biosynthetic process GO:0045343 regulation of MHC class I biosynthetic process GO:0045580 regulation of T cell differentiation GO:0045581 negative regulation of T cell differentiation GO:0045619 regulation of lymphocyte differentiation GO:0045620 negative regulation of lymphocyte differentiation GO:0046425 regulation of JAK-STAT cascade GO:0046651 lymphocyte proliferation GO:0048525 negative regulation of viral process GO:0048545 response to steroid hormone GO:0050777 negative regulation of immune response GO:0050792 regulation of viral process GO:0050817 coagulation GO:0050863 regulation of T cell activation GO:0050865 regulation of cell activation GO:0050866 negative regulation of cell activation GO:0050868 negative regulation of T cell activation GO:0050878 regulation of body fluid levels GO:0051249 regulation of lymphocyte activation GO:0051250 negative regulation of lymphocyte activation GO:0051384 response to glucocorticoid GO:0051607 defense response to virus GO:0060337 type I interferon signaling pathway GO:0060338 regulation of type I interferon-mediated signaling pathway GO:0060759 regulation of response to cytokine stimulus GO:0070486 leukocyte aggregation GO:0070489 T cell aggregation GO:0070661 leukocyte proliferation GO:0071357 cellular response to type I interferon GO:0071359 cellular response to dsRNA GO:0071360 cellular response to exogenous dsRNA GO:0071383 cellular response to steroid hormone stimulus GO:0071384 cellular response to corticosteroid stimulus GO:0071385 cellular response to glucocorticoid stimulus GO:0071396 cellular response to lipid GO:0071407 cellular response to organic cyclic compound GO:0071548 response to dexamethasone GO:0071549 cellular response to dexamethasone stimulus GO:0071593 lymphocyte aggregation GO:0097696 STAT cascade GO:0098542 defense response to other organism GO:0098586 cellular response to virus GO:1901654 response to ketone GO:1901655 cellular response to ketone GO:1902105 regulation of leukocyte differentiation GO:1902106 negative regulation of leukocyte differentiation GO:1903037 regulation of leukocyte cell-cell adhesion GO:1903038 negative regulation of leukocyte cell-cell adhesion GO:1903706 regulation of hemopoiesis GO:1903707 negative regulation of hemopoiesis GO:1903900 regulation of viral life cycle GO:1903901 negative regulation of viral life cycle GO:1904892 regulation of STAT cascade GO:2000551 regulation of T-helper 2 cell cytokine production GO:2000552 negative regulation of T-helper 2 cell cytokine production GO:2001233 regulation of apoptotic signaling pathway GO:2001235 positive regulation of apoptotic signaling pathway |
Molecular Function |
GO:0005125 cytokine activity GO:0005126 cytokine receptor binding GO:0005132 type I interferon receptor binding GO:0008374 O-acyltransferase activity GO:0008811 chloramphenicol O-acetyltransferase activity GO:0016407 acetyltransferase activity GO:0016413 O-acetyltransferase activity GO:0016746 transferase activity, transferring acyl groups GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups |
Cellular Component | - |
KEGG |
hsa04060 Cytokine-cytokine receptor interaction hsa04151 PI3K-Akt signaling pathway hsa04380 Osteoclast differentiation hsa04620 Toll-like receptor signaling pathway hsa04621 NOD-like receptor signaling pathway hsa04622 RIG-I-like receptor signaling pathway hsa04623 Cytosolic DNA-sensing pathway hsa04630 Jak-STAT signaling pathway hsa04650 Natural killer cell mediated cytotoxicity |
Reactome |
R-HSA-2559583: Cellular Senescence R-HSA-2262752: Cellular responses to stress R-HSA-1280215: Cytokine Signaling in Immune system R-HSA-983231: Factors involved in megakaryocyte development and platelet production R-HSA-109582: Hemostasis R-HSA-168256: Immune System R-HSA-168249: Innate Immune System R-HSA-913531: Interferon Signaling R-HSA-909733: Interferon alpha/beta signaling R-HSA-2559580: Oxidative Stress Induced Senescence R-HSA-168928: RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways R-HSA-912694: Regulation of IFNA signaling R-HSA-918233: TRAF3-dependent IRF activation pathway R-HSA-933541: TRAF6 mediated IRF7 activation |
Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Literatures that report relations between IFNB1 and anti-tumor immunity. The specific mechanism were also collected if the literature reports that a gene specifically promotes or inhibits the infiltration or function of T/NK cells. |
Literatures describing the relation between IFNB1 and anti-tumor immunity in human cancer.
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Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | High-throughput screening data (e.g. CRISPR-Cas9, shRNA and RNAi) for T cell-mediated killing. Genetic screen techniques can identify mechanisms of tumor cell resistance (e.g., PTPN2) and sensitivity (e.g., APLNR) to killing by cytotoxic T cells, the central effectors of anti-tumor immunity. After comprehensively searching, eight groups of screening data sets were collected in the current database. In this tab, users can check whether their selected genes cause resistance or increase sensitivity to T cell-mediated killing in various data sets. |
> High-throughput Screening
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Statistical results of IFNB1 in screening data sets for detecting immune reponses.
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Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Transcriptomic and genomic profiling of pre-treated tumor biopsies from responders and non-responders to immunotherapy. These data were used to identify signatures and mechanisms of response to checkpoint blockade (e.g., anti-PDL1 and anti-PD1). One example is that mutations in the gene PBRM1 benefit clinical survival of patients with clear cell renal cell carcinoma. After comprehensively searching, we collected 5 and 6 of transcriptomic and genomic data sets, respectively. In this tab, users can check whether their selected genes have significant difference of expression or mutation between responders and non-responders in various data sets. > Expression difference between responders and non-responders > Mutation difference between responders and non-responders |
Points in the above scatter plot represent the expression difference of IFNB1 in various data sets.
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Points in the above scatter plot represent the mutation difference of IFNB1 in various data sets.
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Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between abundance of tumor-infiltrating lymphocytes (TILs) and expression, copy number, methylation, or mutation of IFNB1. The immune-related signatures of 28 TIL types from Charoentong's study, which can be viewed in the download page. For each cancer type, the relative abundance of TILs were inferred by using gene set variation analysis (GSVA) based on gene expression profile. In this tab, users can examine which kinds of TILs might be regulated by the current gene. |
Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between three kinds of immunomodulators and expression, copy number, methylation, or mutation of IFNB1. These immunomo-dulators were collected from Charoentong's study. In this tab, users can examine which immunomodulators might be regulated by IFNB1. > Immunoinhibitor > Immunostimulator > MHC molecule |
Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Relations between chemokines (or receptors) and expression, copy number, methylation, or mutation of IFNB1. In this tab, users can examine which chemokines (or receptors) might be regulated by the current gene. > Chemokine > Receptor |
Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Distribution of IFNB1 expression across immune and molecular subtypes. > Immune subtype > Molecular subtype |
Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content |
Associations between IFNB1 and clinical features. > Overall survival analysis > Cancer stage > Tumor grade |
Summary | |
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Symbol | IFNB1 |
Name | interferon, beta 1, fibroblast |
Aliases | IFB; IFF; IFNB; IFN-beta; fibroblast interferon; Interferon beta |
Chromosomal Location | 9p22 |
External Links | HGNC, NCBI, Ensembl, Uniprot, GeneCards |
Content | Drugs targeting IFNB1 collected from DrugBank database. |
Details on drugs targeting IFNB1.
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