Browse MET

Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Basic function annotation.
> Subcellular Location, Domain and Function
> Gene Ontology
> KEGG and Reactome Pathway
> Subcellular Location, Domain and Function
 
Subcellular Location Membrane; Single-pass type I membrane protein.; SUBCELLULAR LOCATION: Isoform 3: Secreted.
Domain PF07714 Protein tyrosine kinase
PF01437 Plexin repeat
PF01403 Sema domain
PF01833 IPT/TIG domain
Function

Receptor tyrosine kinase that transduces signals from the extracellular matrix into the cytoplasm by binding to hepatocyte growth factor/HGF ligand. Regulates many physiological processes including proliferation, scattering, morphogenesis and survival. Ligand binding at the cell surface induces autophosphorylation of MET on its intracellular domain that provides docking sites for downstream signaling molecules. Following activation by ligand, interacts with the PI3-kinase subunit PIK3R1, PLCG1, SRC, GRB2, STAT3 or the adapter GAB1. Recruitment of these downstream effectors by MET leads to the activation of several signaling cascades including the RAS-ERK, PI3 kinase-AKT, or PLCgamma-PKC. The RAS-ERK activation is associated with the morphogenetic effects while PI3K/AKT coordinates prosurvival effects. During embryonic development, MET signaling plays a role in gastrulation, development and migration of muscles and neuronal precursors, angiogenesis and kidney formation. In adults, participates in wound healing as well as organ regeneration and tissue remodeling. Promotes also differentiation and proliferation of hematopoietic cells. May regulate cortical bone osteogenesis (By similarity). ; FUNCTION: Acts as a receptor for Listeria internalin inlB, mediating entry of the pathogen into cells.

> Gene Ontology
 
Biological Process GO:0000302 response to reactive oxygen species
GO:0001667 ameboidal-type cell migration
GO:0001763 morphogenesis of a branching structure
GO:0001885 endothelial cell development
GO:0001886 endothelial cell morphogenesis
GO:0002064 epithelial cell development
GO:0003158 endothelium development
GO:0003382 epithelial cell morphogenesis
GO:0006914 autophagy
GO:0006979 response to oxidative stress
GO:0010035 response to inorganic substance
GO:0010421 hydrogen peroxide-mediated programmed cell death
GO:0010506 regulation of autophagy
GO:0010507 negative regulation of autophagy
GO:0010594 regulation of endothelial cell migration
GO:0010595 positive regulation of endothelial cell migration
GO:0010631 epithelial cell migration
GO:0010632 regulation of epithelial cell migration
GO:0010634 positive regulation of epithelial cell migration
GO:0018108 peptidyl-tyrosine phosphorylation
GO:0018212 peptidyl-tyrosine modification
GO:0030335 positive regulation of cell migration
GO:0032103 positive regulation of response to external stimulus
GO:0034599 cellular response to oxidative stress
GO:0034614 cellular response to reactive oxygen species
GO:0035239 tube morphogenesis
GO:0035767 endothelial cell chemotaxis
GO:0036473 cell death in response to oxidative stress
GO:0036474 cell death in response to hydrogen peroxide
GO:0040017 positive regulation of locomotion
GO:0042542 response to hydrogen peroxide
GO:0043542 endothelial cell migration
GO:0045446 endothelial cell differentiation
GO:0048012 hepatocyte growth factor receptor signaling pathway
GO:0048754 branching morphogenesis of an epithelial tube
GO:0050918 positive chemotaxis
GO:0050920 regulation of chemotaxis
GO:0050921 positive regulation of chemotaxis
GO:0051272 positive regulation of cellular component movement
GO:0060326 cell chemotaxis
GO:0060562 epithelial tube morphogenesis
GO:0061138 morphogenesis of a branching epithelium
GO:0070301 cellular response to hydrogen peroxide
GO:0071526 semaphorin-plexin signaling pathway
GO:0090130 tissue migration
GO:0090132 epithelium migration
GO:0097468 programmed cell death in response to reactive oxygen species
GO:1900407 regulation of cellular response to oxidative stress
GO:1900408 negative regulation of cellular response to oxidative stress
GO:1901031 regulation of response to reactive oxygen species
GO:1901032 negative regulation of response to reactive oxygen species
GO:1901298 regulation of hydrogen peroxide-mediated programmed cell death
GO:1901299 negative regulation of hydrogen peroxide-mediated programmed cell death
GO:1902882 regulation of response to oxidative stress
GO:1902883 negative regulation of response to oxidative stress
GO:1903201 regulation of oxidative stress-induced cell death
GO:1903202 negative regulation of oxidative stress-induced cell death
GO:1903205 regulation of hydrogen peroxide-induced cell death
GO:1903206 negative regulation of hydrogen peroxide-induced cell death
GO:2000147 positive regulation of cell motility
GO:2001026 regulation of endothelial cell chemotaxis
GO:2001028 positive regulation of endothelial cell chemotaxis
Molecular Function GO:0004713 protein tyrosine kinase activity
GO:0004714 transmembrane receptor protein tyrosine kinase activity
GO:0005008 hepatocyte growth factor-activated receptor activity
GO:0019199 transmembrane receptor protein kinase activity
GO:0019902 phosphatase binding
GO:0019903 protein phosphatase binding
Cellular Component GO:0009925 basal plasma membrane
GO:0016323 basolateral plasma membrane
GO:0045178 basal part of cell
> KEGG and Reactome Pathway
 
KEGG hsa04014 Ras signaling pathway
hsa04015 Rap1 signaling pathway
hsa04060 Cytokine-cytokine receptor interaction
hsa04144 Endocytosis
hsa04151 PI3K-Akt signaling pathway
hsa04360 Axon guidance
hsa04510 Focal adhesion
hsa04520 Adherens junction
Reactome R-HSA-170984: ARMS-mediated activation
R-HSA-1280218: Adaptive Immune System
R-HSA-422475: Axon guidance
R-HSA-2219530: Constitutive Signaling by Aberrant PI3K in Cancer
R-HSA-1280215: Cytokine Signaling in Immune system
R-HSA-2172127: DAP12 interactions
R-HSA-2424491: DAP12 signaling
R-HSA-1266738: Developmental Biology
R-HSA-1643685: Disease
R-HSA-5663202: Diseases of signal transduction
R-HSA-186763: Downstream signal transduction
R-HSA-1168372: Downstream signaling events of B Cell Receptor (BCR)
R-HSA-2871796: FCERI mediated MAPK activation
R-HSA-2454202: Fc epsilon receptor (FCERI) signaling
R-HSA-170968: Frs2-mediated activation
R-HSA-180292: GAB1 signalosome
R-HSA-179812: GRB2 events in EGFR signaling
R-HSA-881907: Gastrin-CREB signalling pathway via PKC and MAPK
R-HSA-2428924: IGF1R signaling cascade
R-HSA-112399: IRS-mediated signalling
R-HSA-2428928: IRS-related events triggered by IGF1R
R-HSA-168256: Immune System
R-HSA-5663205: Infectious disease
R-HSA-8875360: InlB-mediated entry of Listeria monocytogenes into host cell
R-HSA-168249: Innate Immune System
R-HSA-74751: Insulin receptor signalling cascade
R-HSA-912526: Interleukin receptor SHC signaling
R-HSA-451927: Interleukin-2 signaling
R-HSA-512988: Interleukin-3, 5 and GM-CSF signaling
R-HSA-8876384: Listeria monocytogenes entry into host cells
R-HSA-5683057: MAPK family signaling cascades
R-HSA-5684996: MAPK1/MAPK3 signaling
R-HSA-6806942: MET Receptor Activation
R-HSA-8851907: MET activates PI3K/AKT signaling
R-HSA-8874081: MET activates PTK2 signaling
R-HSA-8865999: MET activates PTPN11
R-HSA-8875555: MET activates RAP1 and RAC1
R-HSA-8851805: MET activates RAS signaling
R-HSA-8875791: MET activates STAT3
R-HSA-8875513: MET interacts with TNS proteins
R-HSA-8875878: MET promotes cell motility
R-HSA-8875656: MET receptor recycling
R-HSA-375165: NCAM signaling for neurite out-growth
R-HSA-187037: NGF signalling via TRKA from the plasma membrane
R-HSA-6807004: Negative regulation of MET activity
R-HSA-199418: Negative regulation of the PI3K/AKT network
R-HSA-2219528: PI3K/AKT Signaling in Cancer
R-HSA-198203: PI3K/AKT activation
R-HSA-6811558: PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
R-HSA-1257604: PIP3 activates AKT signaling
R-HSA-169893: Prolonged ERK activation events
R-HSA-5673001: RAF/MAP kinase cascade
R-HSA-8853659: RET signaling
R-HSA-2730905: Role of LAT2/NTAL/LAB on calcium mobilization
R-HSA-180336: SHC1 events in EGFR signaling
R-HSA-112412: SOS-mediated signalling
R-HSA-400685: Sema4D in semaphorin signaling
R-HSA-416550: Sema4D mediated inhibition of cell attachment and migration
R-HSA-373755: Semaphorin interactions
R-HSA-162582: Signal Transduction
R-HSA-177929: Signaling by EGFR
R-HSA-372790: Signaling by GPCR
R-HSA-74752: Signaling by Insulin receptor
R-HSA-449147: Signaling by Interleukins
R-HSA-2586552: Signaling by Leptin
R-HSA-6806834: Signaling by MET
R-HSA-186797: Signaling by PDGF
R-HSA-1433557: Signaling by SCF-KIT
R-HSA-2404192: Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
R-HSA-194138: Signaling by VEGF
R-HSA-983705: Signaling by the B Cell Receptor (BCR)
R-HSA-166520: Signalling by NGF
R-HSA-187687: Signalling to ERKs
R-HSA-167044: Signalling to RAS
R-HSA-187706: Signalling to p38 via RIT and RIN
R-HSA-4420097: VEGFA-VEGFR2 Pathway
R-HSA-5218921: VEGFR2 mediated cell proliferation
Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Literatures that report relations between MET and anti-tumor immunity. The specific mechanism were also collected if the literature reports that a gene specifically promotes or inhibits the infiltration or function of T/NK cells.
> Text Mining
 
  Literatures describing the relation between MET and anti-tumor immunity in human cancer.
PMID Cancer type Relation to immunity Evidence sentences
24561793Chronic Lymphocytic LeukemiaInhibit immunityChronic lymphocytic leukemia nurse-like cells express hepatocyte growth factor receptor (c-MET) and indoleamine 2,3-dioxygenase and display features of immunosuppressive type 2 skewed macrophages. Hepatocyte growth factor may thus have a dual pathophysiological role: directly through enhancement of survival of the leukemic clone and indirectly by favoring T-cell immunosuppression.
29631966adenocarcinomas; squamous Cell CarcinomaInhibit immunity immunotherapy targetHigh MET expression correlated with activation markers of the mitogen-activated protein kinase (MAPK) and phosphatidylinositol 3-kinase/protein kinase B (PI3K/AKT) pathways only in cases without Kirsten rat sarcoma viral oncogene homolog (KRAS), epidermal growth factor receptor (EGFR), v-Raf murine sarcoma viral oncogene homolog B (BRAF), anaplastic lymphoma kinase (ALK) and proto-oncogene tyrosine-protein kinase ROS (ROS1) aberrations.
Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content High-throughput screening data (e.g. CRISPR-Cas9, shRNA and RNAi) for T cell-mediated killing. Genetic screen techniques can identify mechanisms of tumor cell resistance (e.g., PTPN2) and sensitivity (e.g., APLNR) to killing by cytotoxic T cells, the central effectors of anti-tumor immunity. After comprehensively searching, eight groups of screening data sets were collected in the current database. In this tab, users can check whether their selected genes cause resistance or increase sensitivity to T cell-mediated killing in various data sets.
> High-throughput Screening
  Statistical results of MET in screening data sets for detecting immune reponses.
PMID Screening System Cancer Type Cell Line Data Set Statistical Results Relation to immunity
29301958CRISPR-Cas9 melanomaB16F10Pmel-1 T cell NA/NS NA/NS
29301958CRISPR-Cas9 melanomaB16F10OT-1 T cell NA/NS NA/NS
28783722CRISPR-Cas9 melanomaMel6242CT-CRISPR NA/NS NA/NS
28723893CRISPR-Cas9 melanomaB16GVAX+Anti-PD1 NA/NS NA/NS
28723893CRISPR-Cas9 melanomaB16GVAX NA/NS NA/NS
25691366RNAiBreast cancerMCF7Luc-CTL assay NA/NS NA/NS
24476824shRNAmelanomaB16Primary screen NA/NS NA/NS
24476824shRNAmelanomaB16Secondary screen Total # shRNA with >= 4-fold: 3 Resistant to T-cell proliferation
Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Transcriptomic and genomic profiling of pre-treated tumor biopsies from responders and non-responders to immunotherapy. These data were used to identify signatures and mechanisms of response to checkpoint blockade (e.g., anti-PDL1 and anti-PD1). One example is that mutations in the gene PBRM1 benefit clinical survival of patients with clear cell renal cell carcinoma. After comprehensively searching, we collected 5 and 6 of transcriptomic and genomic data sets, respectively. In this tab, users can check whether their selected genes have significant difference of expression or mutation between responders and non-responders in various data sets.
> Expression difference between responders and non-responders
> Mutation difference between responders and non-responders
> Expression difference between responders and non-responders
 
Points in the above scatter plot represent the expression difference of MET in various data sets.
No PMID Cancer type Group Drug # Res # NRes Log2 (Fold Change) P value Anno
126997480MelanomaallAnti-PD-1 (pembrolizumab and nivolumab)14120.1330.865
226997480MelanomaMAPKiAnti-PD-1 (pembrolizumab and nivolumab)650.0490.98
326997480Melanomanon-MAPKiAnti-PD-1 (pembrolizumab and nivolumab)870.1850.912
428552987Urothelial cancerallAnti-PD-L1 (atezolizumab) 9160.0320.962
528552987Urothelial cancersmokingAnti-PD-L1 (atezolizumab) 590.3850.865
628552987Urothelial cancernon-smokingAnti-PD-L1 (atezolizumab) 47-0.4110.889
729033130MelanomaallAnti-PD-1 (nivolumab) 2623-0.0140.985
829033130MelanomaNIV3-PROGAnti-PD-1 (nivolumab) 1511-0.7850.692
929033130MelanomaNIV3-NAIVEAnti-PD-1 (nivolumab) 11120.7190.758
1029301960Clear cell renal cell carcinoma (ccRCC)allAnti-PD-1 (nivolumab) 480.0130.994
1129301960Clear cell renal cell carcinoma (ccRCC)VEGFRiAnti-PD-1 (nivolumab) 2001
1229301960Clear cell renal cell carcinoma (ccRCC)non-VEGFRiAnti-PD-1 (nivolumab) 280.4170.88
1329443960Urothelial cancerallAnti-PD-L1 (atezolizumab) 68230-0.0530.73
> Mutation difference between responders and non-responders
 
Points in the above scatter plot represent the mutation difference of MET in various data sets.
No PMID Cancer type Group Drug # Res # NRes % Mut/Res % Mut/NRes % Diff (R vs NR) Pval Anno
125765070Non-small cell lung cancer (NSCLC)allAnti-PD-1 (pembrolizumab) 14177.15.91.21
225765070Non-small cell lung cancer (NSCLC)smokingAnti-PD-1 (pembrolizumab) 103100101
325765070Non-small cell lung cancer (NSCLC)non-smokingAnti-PD-1 (pembrolizumab) 41407.1-7.11
426359337MelanomaallAnti-CTLA-4 (ipilimumab) 277311.12.78.40.12
526359337MelanomaBRAFiAnti-CTLA-4 (ipilimumab) 01407.1-7.11
626359337Melanomanon-BRAFiAnti-CTLA-4 (ipilimumab) 275911.11.79.40.0895
726997480MelanomaallAnti-PD-1 (pembrolizumab and nivolumab)211723.811.8120.427
826997480MelanomaMAPKiAnti-PD-1 (pembrolizumab and nivolumab)8612.5012.51
926997480Melanomanon-MAPKiAnti-PD-1 (pembrolizumab and nivolumab)131130.818.212.60.649
1028552987Urothelial cancerallAnti-PD-L1 (atezolizumab) 916012.5-12.50.52
1128552987Urothelial cancersmokingAnti-PD-L1 (atezolizumab) 59011.1-11.11
1228552987Urothelial cancernon-smokingAnti-PD-L1 (atezolizumab) 47014.3-14.31
1329033130MelanomaallAnti-PD-1 (nivolumab) 382710.53.76.80.393
1429033130MelanomaNIV3-PROGAnti-PD-1 (nivolumab) 221313.67.75.91
1529033130MelanomaNIV3-NAIVEAnti-PD-1 (nivolumab) 16146.206.21
1629301960Clear cell renal cell carcinoma (ccRCC)allAnti-PD-1 (nivolumab) 11139.115.4-6.31
1729301960Clear cell renal cell carcinoma (ccRCC)VEGFRiAnti-PD-1 (nivolumab) 6116.7016.71
1829301960Clear cell renal cell carcinoma (ccRCC)non-VEGFRiAnti-PD-1 (nivolumab) 512016.7-16.71
Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Relations between abundance of tumor-infiltrating lymphocytes (TILs) and expression, copy number, methylation, or mutation of MET. The immune-related signatures of 28 TIL types from Charoentong's study, which can be viewed in the download page. For each cancer type, the relative abundance of TILs were inferred by using gene set variation analysis (GSVA) based on gene expression profile. In this tab, users can examine which kinds of TILs might be regulated by the current gene.
> Lymphocyte
 
Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Relations between three kinds of immunomodulators and expression, copy number, methylation, or mutation of MET. These immunomo-dulators were collected from Charoentong's study. In this tab, users can examine which immunomodulators might be regulated by MET.
> Immunoinhibitor
> Immunostimulator
> MHC molecule
> Immunoinhibitor
 
> Immunostimulator
 
> MHC molecule
 
Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Relations between chemokines (or receptors) and expression, copy number, methylation, or mutation of MET. In this tab, users can examine which chemokines (or receptors) might be regulated by the current gene.
> Chemokine
> Receptor
> Chemokine
 
> Receptor
 
Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Distribution of MET expression across immune and molecular subtypes.
> Immune subtype
> Molecular subtype
> Immune subtype
 
> Molecular subtype
 
Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Associations between MET and clinical features.
> Overall survival analysis
> Cancer stage
> Tumor grade
> Overall survival
 
> Stage
 
> Grade
 
Summary
SymbolMET
NameMET proto-oncogene, receptor tyrosine kinase
Aliases HGFR; DFNB97; hepatocyte growth factor receptor; met proto-oncogene; AUTS9; c-Met; HGF receptor; HGF/SF rece ......
Chromosomal Location7q31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Content Drugs targeting MET collected from DrugBank database.
> Drugs from DrugBank database
 

  Details on drugs targeting MET.
ID Name Drug Type Targets #Targets
DB02152K-252aSmall MoleculeMAP2K1, MET2
DB068961-(4-fluorophenyl)-N-[3-fluoro-4-(1H-pyrrolo[2,3-b]pyridin-4-yloxy)phenyl]-2-oxo-1,2-dihydropyridine-3-carboxamideSmall MoleculeMET1
DB06995N-({4-[(2-aminopyridin-4-yl)oxy]-3-fluorophenyl}carbamoyl)-2-(4-fluorophenyl)acetamideSmall MoleculeMET1
DB069972-(4-fluorophenyl)-N-{[3-fluoro-4-(1H-pyrrolo[2,3-b]pyridin-4-yloxy)phenyl]carbamoyl}acetamideSmall MoleculeMET1
DB07369N-(3-chlorophenyl)-N-methyl-2-oxo-3-[(3,4,5-trimethyl-1H-pyrrol-2-yl)methyl]-2H-indole-5-sulfonamideSmall MoleculeMET1
DB079693-[3-(4-methylpiperazin-1-yl)-7-(trifluoromethyl)quinoxalin-5-yl]phenolSmall MoleculeMET1
DB085846-{[6-(1-methyl-1H-pyrazol-4-yl)[1,2,4]triazolo[4,3-b]pyridazin-3-yl]sulfanyl}quinolineSmall MoleculeMET1
DB087911-[(2-NITROPHENYL)SULFONYL]-1H-PYRROLO[3,2-B]PYRIDINE-6-CARBOXAMIDESmall MoleculeMET1
DB08865CrizotinibSmall MoleculeALK, MET2
DB08875CabozantinibSmall MoleculeKDR, MET, RET3
DB12200TivantinibSmall MoleculeMET1
DB12267BrigatinibSmall MoleculeABL1, ALK, EGFR, ERBB2, ERBB4, FLT3, IGF1R, INSR, MET9
DB12742AmuvatinibSmall MoleculeFLT3, KIT, MET, PDGFRA, RAD51, RET6