Browse for cancer cell lines from breast

  Summary of CRs for cancer cell lines from breast .
Gene Symbol Gene Name % Mutation Median Expr. (Microarray)
NCOA3nuclear receptor coactivator 320.698.6
KMT2Clysine methyltransferase 2C17.248.4
EP400E1A binding protein p40012.077.4
ERCC6ERCC excision repair 6, chromatin remodeling factor10.345.7
ARID1AAT-rich interaction domain 1A10.348.5
KAT6Blysine acetyltransferase 6B10.34NA
BRD4bromodomain containing 48.628.05
KAT6Alysine acetyltransferase 6A8.62NA
MGAMGA, MAX dimerization protein6.97.9
NIPBLNIPBL, cohesin loading factor6.98.5
CHD8chromodomain helicase DNA binding protein 86.98.1
NSD1nuclear receptor binding SET domain protein 16.95.9
TP53BP1tumor protein p53 binding protein 16.96.7
CHD9chromodomain helicase DNA binding protein 96.98.8
TAF1TATA-box binding protein associated factor 16.9NA
ATRXATRX, chromatin remodeler6.9NA
NCOA2nuclear receptor coactivator 25.175.6
SP140SP140 nuclear body protein5.174
PHF3PHD finger protein 35.178.2
CHD5chromodomain helicase DNA binding protein 55.174.2
HNF1AHNF1 homeobox A5.174.3
MLLT10myeloid/lymphoid or mixed-lineage leukemia; translocated to, 105.177.45
NCOA4nuclear receptor coactivator 45.1712.1
TRRAPtransformation/transcription domain associated protein5.177.9
KDM6Alysine demethylase 6A5.17NA
RAI1retinoic acid induced 13.457.3
CREBBPCREB binding protein3.456.7
DNMT3BDNA methyltransferase 3 beta3.458
EP300E1A binding protein p3003.457.9
SIRT1sirtuin 13.458.8
KMT2Alysine methyltransferase 2A3.457.5
BRD2bromodomain containing 23.4510
PRDM16PR/SET domain 163.453.7
SMARCA2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 23.457.6
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 43.459.25
TET1tet methylcytosine dioxygenase 13.456.3
BAP1BRCA1 associated protein 13.457.25
HDAC4histone deacetylase 43.455.8
SETDB1SET domain bifurcated 13.456.9
BMI1BMI1 proto-oncogene, polycomb ring finger3.45NA
HDAC6histone deacetylase 63.45NA
CHD3chromodomain helicase DNA binding protein 31.727.2
ATF2activating transcription factor 21.726
DAXXdeath domain associated protein1.728.2
SUZ12SUZ12 polycomb repressive complex 2 subunit1.7210.2
LMNB1lamin B11.729.7
NSD3nuclear receptor binding SET domain protein 31.727.15
PHIPpleckstrin homology domain interacting protein1.729.6
STK31serine/threonine kinase 311.724
ARID1BAT-rich interaction domain 1B1.726.85
BRDTbromodomain testis associated1.723.7
ZMYM2zinc finger MYM-type containing 21.725.5
TNRC18trinucleotide repeat containing 181.726.2
NCOA1nuclear receptor coactivator 11.727.8
TRIM24tripartite motif containing 241.729.55
BAG6BCL2 associated athanogene 61.72NA
HDAC5histone deacetylase 505.6
TRIM28tripartite motif containing 28010.25
PRMT3protein arginine methyltransferase 309.2
SMNDC1survival motor neuron domain containing 1010.2
IKZF1IKAROS family zinc finger 103.9
SMYD5SMYD family member 506.8
PRMT5protein arginine methyltransferase 5010.1
CARM1coactivator associated arginine methyltransferase 108.7
KAT5lysine acetyltransferase 508.1
CTCFCCCTC-binding factor09.8
KDM5Blysine demethylase 5B09.45
ZMYND11zinc finger MYND-type containing 1108.2
SRCAPSnf2 related CREBBP activator protein05.3
RUVBL2RuvB like AAA ATPase 2011.2
BRD8bromodomain containing 807.7
EHMT2euchromatic histone lysine methyltransferase 207.1
MORF4L1mortality factor 4 like 1012.9
TDRKHtudor and KH domain containing05.3
CHD1chromodomain helicase DNA binding protein 109
CHD2chromodomain helicase DNA binding protein 207.8
DIDO1death inducer-obliterator 107.35
CHD4chromodomain helicase DNA binding protein 409.5
WDR5WD repeat domain 508.2
PRDM7PR/SET domain 704.1
PRDM5PR/SET domain 504.05
PRDM4PR/SET domain 408.1
PSIP1PC4 and SFRS1 interacting protein 109.5
BAZ2Abromodomain adjacent to zinc finger domain 2A06.4
BAZ1Abromodomain adjacent to zinc finger domain 1A09.5
SGF29SAGA complex associated factor 2908.1
PHF21BPHD finger protein 21B03.8
CBX3chromobox 3012.1
MBD6methyl-CpG binding domain protein 607.7
SMYD4SET and MYND domain containing 407.4
UHRF2ubiquitin like with PHD and ring finger domains 209.95
AEBP2AE binding protein 206.2
TDRD9tudor domain containing 903.9
CDYL2chromodomain Y like 205.3
INO80CINO80 complex subunit C09.1
TDRD10tudor domain containing 1004.3
SETD9SET domain containing 907.9
NCOA7nuclear receptor coactivator 709.85
TAF1LTATA-box binding protein associated factor 1 like04.3
PHF13PHD finger protein 1309.6
SMYD1SET and MYND domain containing 103.8
ZCWPW2zinc finger CW-type and PWWP domain containing 203.6
KIAA2026KIAA202607.6
TDRD5tudor domain containing 504.6
PWWP2BPWWP domain containing 2B05.85
ASXL1additional sex combs like 1, transcriptional regulator08.2
DNMT1DNA methyltransferase 1011.3
TRDMT1tRNA aspartic acid methyltransferase 105.65
DNMT3ADNA methyltransferase 3 alpha05.7
DUSP1dual specificity phosphatase 107.5
PHC2polyhomeotic homolog 209.6
ARID2AT-rich interaction domain 208.2
TET3tet methylcytosine dioxygenase 306.9
EYA4EYA transcriptional coactivator and phosphatase 404
MECOMMDS1 and EVI1 complex locus06.2
EYA1EYA transcriptional coactivator and phosphatase 104
EYA2EYA transcriptional coactivator and phosphatase 204.45
EYA3EYA transcriptional coactivator and phosphatase 306.8
EZH1enhancer of zeste 1 polycomb repressive complex 2 subunit06.8
EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit09.65
BPTFbromodomain PHD finger transcription factor08.5
JMJD1Cjumonji domain containing 1C07.5
ALKBH3alkB homolog 3, alpha-ketoglutaratedependent dioxygenase08.6
TDRD6tudor domain containing 603.7
KDM1Blysine demethylase 1B06.05
MTF2metal response element binding transcription factor 208
BAHD1bromo adjacent homology domain containing 106
DHX30DExH-box helicase 3008.7
SIRT2sirtuin 207.8
SCMH1sex comb on midleg homolog 1 (Drosophila)07.5
KDM2Alysine demethylase 2A08.4
KDM1Alysine demethylase 1A08.85
KDM4Blysine demethylase 4B07.6
NCOA6nuclear receptor coactivator 609.75
SETD1BSET domain containing 1B09.25
KDM4Clysine demethylase 4C06
POGZpogo transposable element derived with ZNF domain09
KDM6Blysine demethylase 6B05.7
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component07.3
JMJD6arginine demethylase and lysine hydroxylase06.3
JADE2jade family PHD finger 207.05
SMCHD1structural maintenance of chromosomes flexible hinge domain containing 108.3
PHF24PHD finger protein 2403.8
ADNPactivity dependent neuroprotector homeobox010.6
SIRT5sirtuin 506.3
SIRT4sirtuin 404.3
SIRT3sirtuin 306.65
TDRD7tudor domain containing 708.4
CBX6chromobox 608.9
CBX5chromobox 508.6
CBX7chromobox 706.75
ZMYND8zinc finger MYND-type containing 809.7
BRD1bromodomain containing 107.65
ZBTB38zinc finger and BTB domain containing 3807.9
GABRG1gamma-aminobutyric acid type A receptor gamma1 subunit03.6
SHPRHSNF2 histone linker PHD RING helicase08.15
SETBP1SET binding protein 105.9
EPC2enhancer of polycomb homolog 207.6
PHF19PHD finger protein 1908.8
KAT2Alysine acetyltransferase 2A07.95
SND1staphylococcal nuclease and tudor domain containing 109.9
BRPF3bromodomain and PHD finger containing 306.4
CECR2CECR2, histone acetyl-lysine reader04.1
ATAD2ATPase family, AAA domain containing 2010.2
SETD2SET domain containing 207.5
BRD7bromodomain containing 708.85
MSH6mutS homolog 6010
GTF3C1general transcription factor IIIC subunit 108.45
TFPTTCF3 fusion partner08.65
HCFC2host cell factor C206.45
DNMT3LDNA methyltransferase 3 like04.4
BAZ2Bbromodomain adjacent to zinc finger domain 2B07.9
HDAC1histone deacetylase 1010.2
HDAC2histone deacetylase 206.9
HDGFheparin binding growth factor011.3
HELLShelicase, lymphoid-specific08.7
CXXC1CXXC finger protein 107.9
AIREautoimmune regulator04.6
PRMT2protein arginine methyltransferase 207.5
PRMT1protein arginine methyltransferase 1011.9
APOBEC1apolipoprotein B mRNA editing enzyme catalytic subunit 103.9
IDH1isocitrate dehydrogenase (NADP(+)) 1, cytosolic011.95
IDH2isocitrate dehydrogenase (NADP(+)) 2, mitochondrial011.05
SP110SP110 nuclear body protein07.2
ING1inhibitor of growth family member 107.5
ING2inhibitor of growth family member 209.3
JARID2jumonji and AT-rich interaction domain containing 207.95
KMT5Alysine methyltransferase 5A07.9
LBRlamin B receptor010.3
LMNAlamin A/C09.6
MBD1methyl-CpG binding domain protein 106.8
MEN1menin 108.5
MGMTO-6-methylguanine-DNA methyltransferase08.5
MLLT6MLLT6, PHD finger domain containing07.7
REREarginine-glutamic acid dipeptide repeats05.3
PHF20L1PHD finger protein 20-like 107.65
KMT5Blysine methyltransferase 5B09.2
PCNAproliferating cell nuclear antigen012.5
PHF11PHD finger protein 1109
ING4inhibitor of growth family member 407.4
PHF20PHD finger protein 2008.6
PHF21APHD finger protein 21A06.55
ACTL6Bactin like 6B04.1
SFMBT1Scm-like with four mbt domains 106
PHF7PHD finger protein 704.75
SIRT7sirtuin 708.6
SIRT6sirtuin 606
HDAC7histone deacetylase 706.2
TRIM33tripartite motif containing 3308.95
ARID4BAT-rich interaction domain 4B08.9
RSF1remodeling and spacing factor 107.8
KDM3Blysine demethylase 3B09
PHF1PHD finger protein 108
PHF2PHD finger protein 208.3
MBD3methyl-CpG binding domain protein 308.2
BRWD1bromodomain and WD repeat domain containing 106.8
SETD4SET domain containing 407.2
POLE3DNA polymerase epsilon 3, accessory subunit010.2
CHRAC1chromatin accessibility complex 107.7
ATAD2BATPase family, AAA domain containing 2B06.5
PRMT7protein arginine methyltransferase 706.85
ING3inhibitor of growth family member 307.2
INO80INO80 complex subunit07.8
MPHOSPH8M-phase phosphoprotein 808.2
TET2tet methylcytosine dioxygenase 206.3
MBTD1mbt domain containing 107.8
GATAD2AGATA zinc finger domain containing 2A08
ZCWPW1zinc finger CW-type and PWWP domain containing 105.75
ELP3elongator acetyltransferase complex subunit 308.15
UBR7ubiquitin protein ligase E3 component n-recognin 7 (putative)09.6
PRMT6protein arginine methyltransferase 607.7
PBRM1polybromo 107.35
SETD5SET domain containing 507.75
ASXL2additional sex combs like 2, transcriptional regulator06.2
MRGBPMRG domain binding protein09.15
PHF10PHD finger protein 1009.15
CHD7chromodomain helicase DNA binding protein 707.5
PPP4R3Aprotein phosphatase 4 regulatory subunit 3A08.25
KDM4Dlysine demethylase 4D04.4
ATF7IPactivating transcription factor 7 interacting protein09.25
MBD5methyl-CpG binding domain protein 504.9
KDM3Alysine demethylase 3A09.25
ASH1LASH1 like histone lysine methyltransferase09.6
KMT2Elysine methyltransferase 2E09.3
DMAP1DNA methyltransferase 1 associated protein 107.75
RNF17ring finger protein 1703.9
TDRD1tudor domain containing 103.8
PRMT8protein arginine methyltransferase 804.3
SMYD2SET and MYND domain containing 2010.7
PRDM8PR/SET domain 803.9
PRDM9PR/SET domain 903.6
PRDM10PR/SET domain 1006.5
PRDM11PR/SET domain 1104.2
INTS12integrator complex subunit 1209.2
PPP4R3Bprotein phosphatase 4 regulatory subunit 3B08.9
CBX8chromobox 805.9
AICDAactivation induced cytidine deaminase03.8
GATAD2BGATA zinc finger domain containing 2B07.15
MTA3metastasis associated 1 family member 308.9
BAHCC1BAH domain and coiled-coil containing 104.85
PHF12PHD finger protein 1205.9
ZBTB4zinc finger and BTB domain containing 408.8
PHRF1PHD and ring finger domains 106.5
SFMBT2Scm-like with four mbt domains 204.4
NCOA5nuclear receptor coactivator 506.75
RAG2recombination activating 203.5
ACTA1actin, alpha 1, skeletal muscle04.15
ARID4AAT-rich interaction domain 4A06.8
KDM5Alysine demethylase 5A07
RBBP4RB binding protein 4, chromatin remodeling factor07.45
RBBP5RB binding protein 5, histone lysine methyltransferase complex subunit07.4
PRDM12PR/SET domain 1204
PRDM13PR/SET domain 1304.3
DPF2double PHD fingers 209
RING1ring finger protein 109.25
RNF2ring finger protein 206.9
ACTBactin beta013.2
ATXN7ataxin 706.55
PRDM15PR/SET domain 1504.9
PRDM14PR/SET domain 1404.9
PRDM1PR/SET domain 105.2
SETSET nuclear proto-oncogene012.3
SETMARSET domain and mariner transposase fusion gene08.4
ACTR6ARP6 actin related protein 6 homolog010.1
SMYD3SET and MYND domain containing 308.7
MEAF6MYST/Esa1 associated factor 607
BRD9bromodomain containing 907.7
SMARCB1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 109
SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 108.7
SMARCC2SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 208
SMARCD1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 106.2
SMARCD2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 208.4
SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 306.25
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1010.8
SP100SP100 nuclear antigen06.3
TCF19transcription factor 1907.8
TCF20transcription factor 2008.4
VPS72vacuolar protein sorting 72 homolog010.2
NSD2nuclear receptor binding SET domain protein 207.8
YY1YY1 transcription factor011.7
PCGF2polycomb group ring finger 206.75
PRDM2PR/SET domain 206.3
BRPF1bromodomain and PHD finger containing 107.9
FTOFTO, alpha-ketoglutarate dependent dioxygenase09.3
PHF23PHD finger protein 2308.6
RIOX1ribosomal oxygenase 108.4
TBL1XR1transducin beta like 1 X-linked receptor 109.65
SUV39H2suppressor of variegation 3-9 homolog 207.4
EHMT1euchromatic histone lysine methyltransferase 107.3
ZMYM1zinc finger MYM-type containing 107.7
KDM8lysine demethylase 804.3
HDAC11histone deacetylase 1106.65
ACTR5ARP5 actin related protein 5 homolog06.85
SETD6SET domain containing 608.3
JADE1jade family PHD finger 107.7
PHC3polyhomeotic homolog 307.6
BRD3bromodomain containing 309.2
EPC1enhancer of polycomb homolog 104.95
ASXL3additional sex combs like 3, transcriptional regulator04
KDM7Alysine demethylase 7A05.7
SETD7SET domain containing lysine methyltransferase 7010.5
KMT2Dlysine methyltransferase 2D06.9
FXR1FMR1 autosomal homolog 107.15
YEATS4YEATS domain containing 407.9
TDRD3tudor domain containing 307.1
AKAP1A-kinase anchoring protein 109.35
DPF1double PHD fingers 105.7
L3MBTL2L3MBTL2 polycomb repressive complex 1 subunit07.35
SETDB2SET domain bifurcated 205.2
TAF3TATA-box binding protein associated factor 306.6
HDAC10histone deacetylase 1004.7
CHD6chromodomain helicase DNA binding protein 604.8
SETD3SET domain containing 307.7
ING5inhibitor of growth family member 506.5
RAD54LRAD54 like (S. cerevisiae)07.75
DOT1LDOT1 like histone lysine methyltransferase06.1
L3MBTL3l(3)mbt-like 3 (Drosophila)05.4
TTF2transcription termination factor 208.55
ZGPATzinc finger CCCH-type and G-patch domain containing07.6
GLYR1glyoxylate reductase 1 homolog06.6
KDM2Blysine demethylase 2B08.7
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 509.5
CBX2chromobox 205.7
PCGF1polycomb group ring finger 108.6
KMT5Clysine methyltransferase 5C05.6
LMNB2lamin B207.4
RIOX2ribosomal oxygenase 208.6
MUM1melanoma associated antigen (mutated) 106.9
HAT1histone acetyltransferase 1011.1
CBX4chromobox 408.5
RUVBL1RuvB like AAA ATPase 109.9
ACTL6Aactin like 6A010.4
EEDembryonic ectoderm development05.95
HDAC3histone deacetylase 308.9
ALKBH1alkB homolog 1, histone H2A dioxygenase07.05
KAT2Blysine acetyltransferase 2B07.1
MBD4methyl-CpG binding domain 4, DNA glycosylase09.8
MBD2methyl-CpG binding domain protein 204.3
BAZ1Bbromodomain adjacent to zinc finger domain 1B08
BTAF1B-TFIID TATA-box binding protein associated factor 109
ASH2LASH2 like histone lysine methyltransferase complex subunit010
PYGO2pygopus family PHD finger 207.3
PRMT9protein arginine methyltransferase 908.1
MTA1metastasis associated 107.25
L3MBTL4l(3)mbt-like 4 (Drosophila)04
ZMYM4zinc finger MYM-type containing 408.85
ZMYM6zinc finger MYM-type containing 606.7
ZMYM5zinc finger MYM-type containing 506.2
MTA2metastasis associated 1 family member 205.1
GLYATL1glycine-N-acyltransferase like 103.9
PRDM6PR/SET domain 605.2
GTF3C4general transcription factor IIIC subunit 409.1
SP140LSP140 nuclear body protein like07.35
ACTR8ARP8 actin related protein 8 homolog06.9
CDYLchromodomain Y like08.8
FXR2FMR1 autosomal homolog 207.4
CLOCKclock circadian regulator09
NCOR1nuclear receptor corepressor 107.7
PHF14PHD finger protein 1406.8
KDM4Alysine demethylase 4A07.5
HDAC9histone deacetylase 904.5
SETD1ASET domain containing 1A05.5
KMT2Blysine methyltransferase 2B05.2
TRIM66tripartite motif containing 6605.35