Download

CR genes and related annotation information

  • CRs_annotation.txt

    • CR genes that are reported in cancer gene databases (i.e., ONGene, TSGene and NCG)

  • Cancer_CRs.txt

    • Mutation information for CRs in human cancer from three sources

  • Mutation_TCGA.txt
  • Mutation_CCLE.txt
  • Mutation_COSMIC.txt

    • Differential expression analysis for 15 cancer types with more than 10 normal samples from TCGA

  • DE_CRs_in_15_cancer_types.txt

    • Drug targeting to CRs from DrugBank

  • CR_drug.txt

    • Accession number for ChIP Seq data set of CRs

  • CR_chipseq.txt

    • Text mining results for CRs in human cancer

  • literature.txt

    • Summary for 26 cancer types from TCGA, including mutation rate, differentail expression analysis, correlation between expression and copy number (or methylation)

  • Bladder urothelial carcinoma (BLCA)
  • Breast invasive carcinoma (BRCA)
  • Cervical and endocervical cancers (CESC)
  • Colon adenocarcinoma (COAD)
  • Esophageal carcinoma (ESCA)
  • Glioblastoma multiforme (GBM)
  • Head and Neck squamous cell carcinoma (HNSC)
  • Kidney renal clear cell carcinoma (KIRC)
  • Kidney renal papillary cell carcinoma (KIRP)
  • Acute Myeloid Leukemia (LAML)
  • Brain Lower Grade Glioma (LGG)
  • Liver hepatocellular carcinoma (LIHC)
  • Lung adenocarcinoma (LUAD)
  • Lung squamous cell carcinoma (LUSC)
  • Ovarian serous cystadenocarcinoma (OV)
  • Pancreatic adenocarcinoma (PAAD)
  • Pheochromocytoma and Paraganglioma (PCPG)
  • Prostate adenocarcinoma (PRAD)
  • Rectum adenocarcinoma (READ)
  • Sarcoma (SARC)
  • Skin Cutaneous Melanoma (SKCM)
  • Stomach adenocarcinoma (STAD)
  • Testicular Germ Cell Tumors (TGCT)
  • Thyroid carcinoma (THCA)
  • Thymoma (THYM)
  • Uterine Corpus Endometrial Carcinoma (UCEC)

    • Summary for 24 cancer types from CCLE, including mutation rate and expression level

  • Autonomic ganglia
  • Biliary tract
  • Bone
  • Breast
  • Central nervous system
  • Endometrium
  • Haematopoietic and lymphoid tissue
  • Kidney
  • Large intestine
  • Liver
  • Lung
  • Oesophagus
  • Ovary
  • Pancreas
  • Pleura
  • Prostate
  • Salivary gland
  • Skin
  • Small intestine
  • Soft tissue
  • Stomach
  • Thyroid
  • Upper aerodigestive tract
  • Urinary tract