Browse for cancer cell lines from central nervous system

  Summary of CRs for cancer cell lines from central nervous system .
Gene Symbol Gene Name % Mutation Median Expr. (Microarray)
NCOA3nuclear receptor coactivator 315.387.45
KAT6Blysine acetyltransferase 6B13.46NA
KMT2Clysine methyltransferase 2C11.548.1
TAF1LTATA-box binding protein associated factor 1 like7.694.25
BRDTbromodomain testis associated7.693.8
CREBBPCREB binding protein5.776.7
MGAMGA, MAX dimerization protein5.777.8
PHF3PHD finger protein 35.778.35
CHD5chromodomain helicase DNA binding protein 55.774
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 45.779.15
TRIM24tripartite motif containing 245.779.3
ATRXATRX, chromatin remodeler5.77NA
KAT6Alysine acetyltransferase 6A5.77NA
NCOA2nuclear receptor coactivator 23.854.85
RAI1retinoic acid induced 13.857.1
EP300E1A binding protein p3003.857.8
NIPBLNIPBL, cohesin loading factor3.858.2
HDAC2histone deacetylase 23.857.05
KMT2Alysine methyltransferase 2A3.857.6
PHIPpleckstrin homology domain interacting protein3.859.2
EP400E1A binding protein p4003.857.5
TP53BP1tumor protein p53 binding protein 13.857
CHD9chromodomain helicase DNA binding protein 93.859.3
NCOA1nuclear receptor coactivator 13.858
HDAC4histone deacetylase 43.855.8
BAG6BCL2 associated athanogene 63.85NA
IKZF1IKAROS family zinc finger 11.923.9
CHD1chromodomain helicase DNA binding protein 11.929.05
SP140SP140 nuclear body protein1.924.1
DAXXdeath domain associated protein1.928.1
ERCC6ERCC excision repair 6, chromatin remodeling factor1.925.35
SIRT1sirtuin 11.928.4
IDH2isocitrate dehydrogenase (NADP(+)) 2, mitochondrial1.929.35
ING1inhibitor of growth family member 11.927.2
JARID2jumonji and AT-rich interaction domain containing 21.927.2
LMNAlamin A/C1.929.8
MEN1menin 11.928.5
TET2tet methylcytosine dioxygenase 21.926.1
KDM5Alysine demethylase 5A1.926.9
SETSET nuclear proto-oncogene1.9211.95
NSD1nuclear receptor binding SET domain protein 11.925.6
HNF1AHNF1 homeobox A1.924.3
NSD2nuclear receptor binding SET domain protein 21.928
BRD3bromodomain containing 31.929
NCOA4nuclear receptor coactivator 41.9211.8
ARID1AAT-rich interaction domain 1A1.928.3
TRRAPtransformation/transcription domain associated protein1.928.4
TNRC18trinucleotide repeat containing 181.926
SETDB1SET domain bifurcated 11.926.4
TAF1TATA-box binding protein associated factor 11.92NA
HDAC6histone deacetylase 61.92NA
HDAC5histone deacetylase 505.6
TRIM28tripartite motif containing 28010.1
PRMT3protein arginine methyltransferase 309.3
SMNDC1survival motor neuron domain containing 1010.25
SMYD5SMYD family member 506.7
PRMT5protein arginine methyltransferase 5010.1
CARM1coactivator associated arginine methyltransferase 108.8
KAT5lysine acetyltransferase 507.8
CTCFCCCTC-binding factor09.6
KDM5Blysine demethylase 5B08.85
ZMYND11zinc finger MYND-type containing 1107.4
SRCAPSnf2 related CREBBP activator protein05.1
RUVBL2RuvB like AAA ATPase 2011.3
BRD8bromodomain containing 807.8
EHMT2euchromatic histone lysine methyltransferase 206.9
MORF4L1mortality factor 4 like 1013.15
TDRKHtudor and KH domain containing04.7
CHD2chromodomain helicase DNA binding protein 207.6
CHD3chromodomain helicase DNA binding protein 306.9
DIDO1death inducer-obliterator 107.15
CHD4chromodomain helicase DNA binding protein 409.5
WDR5WD repeat domain 507.9
PRDM7PR/SET domain 704
PRDM5PR/SET domain 504.4
PRDM4PR/SET domain 408.05
PSIP1PC4 and SFRS1 interacting protein 1010.1
BAZ2Abromodomain adjacent to zinc finger domain 2A05.9
BAZ1Abromodomain adjacent to zinc finger domain 1A09.05
SGF29SAGA complex associated factor 2907.8
PHF21BPHD finger protein 21B03.8
CBX3chromobox 3012.25
MBD6methyl-CpG binding domain protein 607.4
SMYD4SET and MYND domain containing 407.6
UHRF2ubiquitin like with PHD and ring finger domains 2010.1
AEBP2AE binding protein 206.3
TDRD9tudor domain containing 903.7
CDYL2chromodomain Y like 205.1
INO80CINO80 complex subunit C09.1
TDRD10tudor domain containing 1004.2
SETD9SET domain containing 907.7
NCOA7nuclear receptor coactivator 709.6
ATF2activating transcription factor 206.25
PHF13PHD finger protein 1309.7
SMYD1SET and MYND domain containing 103.8
ZCWPW2zinc finger CW-type and PWWP domain containing 203.7
KIAA2026KIAA202607.4
TDRD5tudor domain containing 504
PWWP2BPWWP domain containing 2B05
ASXL1additional sex combs like 1, transcriptional regulator08.4
DNMT1DNA methyltransferase 1011.6
TRDMT1tRNA aspartic acid methyltransferase 106.4
DNMT3ADNA methyltransferase 3 alpha05.4
DNMT3BDNA methyltransferase 3 beta06.9
DUSP1dual specificity phosphatase 107.9
PHC2polyhomeotic homolog 2010.3
ARID2AT-rich interaction domain 208
TET3tet methylcytosine dioxygenase 306.4
EYA4EYA transcriptional coactivator and phosphatase 406.95
MECOMMDS1 and EVI1 complex locus07.25
EYA1EYA transcriptional coactivator and phosphatase 104.7
EYA2EYA transcriptional coactivator and phosphatase 204.15
EYA3EYA transcriptional coactivator and phosphatase 306.9
EZH1enhancer of zeste 1 polycomb repressive complex 2 subunit06.8
EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit09.6
BPTFbromodomain PHD finger transcription factor08.45
JMJD1Cjumonji domain containing 1C07.45
ALKBH3alkB homolog 3, alpha-ketoglutaratedependent dioxygenase08.8
TDRD6tudor domain containing 603.7
KDM1Blysine demethylase 1B05.7
MTF2metal response element binding transcription factor 207.75
BAHD1bromo adjacent homology domain containing 105.5
DHX30DExH-box helicase 3009
SIRT2sirtuin 207.8
SCMH1sex comb on midleg homolog 1 (Drosophila)07.6
KDM2Alysine demethylase 2A07.3
KDM1Alysine demethylase 1A08.9
KDM4Blysine demethylase 4B07.6
NCOA6nuclear receptor coactivator 609.65
SETD1BSET domain containing 1B09
KDM4Clysine demethylase 4C05.85
POGZpogo transposable element derived with ZNF domain08.8
KDM6Blysine demethylase 6B05.4
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component07.2
JMJD6arginine demethylase and lysine hydroxylase06.4
JADE2jade family PHD finger 207
SMCHD1structural maintenance of chromosomes flexible hinge domain containing 108.3
PHF24PHD finger protein 2403.8
ADNPactivity dependent neuroprotector homeobox010.25
SIRT5sirtuin 506
SIRT4sirtuin 404.4
SIRT3sirtuin 306.5
TDRD7tudor domain containing 708.4
CBX6chromobox 609.05
CBX5chromobox 509
BRD4bromodomain containing 408.1
CBX7chromobox 706.25
SUZ12SUZ12 polycomb repressive complex 2 subunit010.3
ZMYND8zinc finger MYND-type containing 809.1
BRD1bromodomain containing 107.25
ZBTB38zinc finger and BTB domain containing 3808.7
GABRG1gamma-aminobutyric acid type A receptor gamma1 subunit03.55
SHPRHSNF2 histone linker PHD RING helicase07.9
SETBP1SET binding protein 107.1
EPC2enhancer of polycomb homolog 207.75
PHF19PHD finger protein 1908.5
KAT2Alysine acetyltransferase 2A07.9
SND1staphylococcal nuclease and tudor domain containing 1010.2
BRPF3bromodomain and PHD finger containing 306.2
CECR2CECR2, histone acetyl-lysine reader04
ATAD2ATPase family, AAA domain containing 209.4
SETD2SET domain containing 207.65
BRD7bromodomain containing 709
MSH6mutS homolog 609.8
GTF3C1general transcription factor IIIC subunit 108.5
TFPTTCF3 fusion partner08.15
HCFC2host cell factor C206.95
DNMT3LDNA methyltransferase 3 like04.4
BAZ2Bbromodomain adjacent to zinc finger domain 2B07.8
HDAC1histone deacetylase 1010.3
HDGFheparin binding growth factor010.8
HELLShelicase, lymphoid-specific08.45
CXXC1CXXC finger protein 108.15
AIREautoimmune regulator04.6
PRMT2protein arginine methyltransferase 207.8
PRMT1protein arginine methyltransferase 1012
APOBEC1apolipoprotein B mRNA editing enzyme catalytic subunit 103.8
IDH1isocitrate dehydrogenase (NADP(+)) 1, cytosolic011.9
SP110SP110 nuclear body protein07.5
ING2inhibitor of growth family member 209.15
KMT5Alysine methyltransferase 5A07.5
LBRlamin B receptor010.3
LMNB1lamin B109.4
MBD1methyl-CpG binding domain protein 106.9
MGMTO-6-methylguanine-DNA methyltransferase05.05
MLLT6MLLT6, PHD finger domain containing07.1
REREarginine-glutamic acid dipeptide repeats05.05
PHF20L1PHD finger protein 20-like 107.5
KMT5Blysine methyltransferase 5B08.7
PCNAproliferating cell nuclear antigen012.6
PHF11PHD finger protein 1108.8
ING4inhibitor of growth family member 407.35
PHF20PHD finger protein 2008.6
PHF21APHD finger protein 21A06.55
ACTL6Bactin like 6B04.15
SFMBT1Scm-like with four mbt domains 105.5
PHF7PHD finger protein 704.8
SIRT7sirtuin 708.25
SIRT6sirtuin 606
HDAC7histone deacetylase 706.2
TRIM33tripartite motif containing 3308.55
ARID4BAT-rich interaction domain 4B08.25
RSF1remodeling and spacing factor 107.8
KDM3Blysine demethylase 3B08.6
PHF1PHD finger protein 108.1
PHF2PHD finger protein 208.1
MBD3methyl-CpG binding domain protein 308.7
BRWD1bromodomain and WD repeat domain containing 105.95
SETD4SET domain containing 407.2
POLE3DNA polymerase epsilon 3, accessory subunit010.4
CHRAC1chromatin accessibility complex 107.5
ATAD2BATPase family, AAA domain containing 2B05.8
PRMT7protein arginine methyltransferase 706.6
ING3inhibitor of growth family member 307.7
INO80INO80 complex subunit07.8
MPHOSPH8M-phase phosphoprotein 808
MBTD1mbt domain containing 106.9
GATAD2AGATA zinc finger domain containing 2A07.8
NSD3nuclear receptor binding SET domain protein 307
ZCWPW1zinc finger CW-type and PWWP domain containing 105.5
ELP3elongator acetyltransferase complex subunit 308.7
UBR7ubiquitin protein ligase E3 component n-recognin 7 (putative)09.55
PRMT6protein arginine methyltransferase 608.05
PBRM1polybromo 107.55
SETD5SET domain containing 507.5
ASXL2additional sex combs like 2, transcriptional regulator06.1
MRGBPMRG domain binding protein09.25
PHF10PHD finger protein 1008.9
CHD7chromodomain helicase DNA binding protein 706.4
PPP4R3Aprotein phosphatase 4 regulatory subunit 3A07.7
KDM4Dlysine demethylase 4D04.7
ATF7IPactivating transcription factor 7 interacting protein09.1
MBD5methyl-CpG binding domain protein 505.75
KDM3Alysine demethylase 3A09.4
ASH1LASH1 like histone lysine methyltransferase09.25
KMT2Elysine methyltransferase 2E09.4
DMAP1DNA methyltransferase 1 associated protein 108.2
RNF17ring finger protein 1703.8
STK31serine/threonine kinase 3103.9
TDRD1tudor domain containing 103.5
PRMT8protein arginine methyltransferase 804.2
SMYD2SET and MYND domain containing 2010.2
PRDM8PR/SET domain 803.8
PRDM9PR/SET domain 903.55
PRDM10PR/SET domain 1006.4
PRDM11PR/SET domain 1104.1
INTS12integrator complex subunit 1209.2
PPP4R3Bprotein phosphatase 4 regulatory subunit 3B08.5
CBX8chromobox 805.8
AICDAactivation induced cytidine deaminase03.7
GATAD2BGATA zinc finger domain containing 2B06.75
ARID1BAT-rich interaction domain 1B06.8
MTA3metastasis associated 1 family member 308
BAHCC1BAH domain and coiled-coil containing 104.8
PHF12PHD finger protein 1205.9
ZBTB4zinc finger and BTB domain containing 409.1
PHRF1PHD and ring finger domains 106.7
CHD8chromodomain helicase DNA binding protein 807.9
SFMBT2Scm-like with four mbt domains 204.3
NCOA5nuclear receptor coactivator 506.6
RAG2recombination activating 203.5
ACTA1actin, alpha 1, skeletal muscle04
ARID4AAT-rich interaction domain 4A06.2
RBBP4RB binding protein 4, chromatin remodeling factor07.25
RBBP5RB binding protein 5, histone lysine methyltransferase complex subunit07.05
PRDM12PR/SET domain 1204
PRDM13PR/SET domain 1304.2
DPF2double PHD fingers 208.8
RING1ring finger protein 109.35
RNF2ring finger protein 207
BRD2bromodomain containing 209.8
ACTBactin beta013.6
ATXN7ataxin 706.4
PRDM16PR/SET domain 1603.75
PRDM15PR/SET domain 1504.8
PRDM14PR/SET domain 1404.9
PRDM1PR/SET domain 106.2
SETMARSET domain and mariner transposase fusion gene08.45
ACTR6ARP6 actin related protein 6 homolog09.6
SMYD3SET and MYND domain containing 308.9
MEAF6MYST/Esa1 associated factor 606.7
SMARCA2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 207.8
BRD9bromodomain containing 907.7
SMARCB1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 109.1
SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 108.6
SMARCC2SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 208
SMARCD1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 106.4
SMARCD2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 207.3
SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 307.2
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1010.9
SP100SP100 nuclear antigen07.4
TCF19transcription factor 1908
TCF20transcription factor 2007.8
VPS72vacuolar protein sorting 72 homolog09.7
YY1YY1 transcription factor011.35
PCGF2polycomb group ring finger 206.7
ZMYM2zinc finger MYM-type containing 205.1
PRDM2PR/SET domain 206.2
BRPF1bromodomain and PHD finger containing 107.8
FTOFTO, alpha-ketoglutarate dependent dioxygenase09.6
PHF23PHD finger protein 2308.8
RIOX1ribosomal oxygenase 107.2
TBL1XR1transducin beta like 1 X-linked receptor 109.3
SUV39H2suppressor of variegation 3-9 homolog 206.9
EHMT1euchromatic histone lysine methyltransferase 106.9
ZMYM1zinc finger MYM-type containing 107.6
KDM8lysine demethylase 804.3
HDAC11histone deacetylase 1106
ACTR5ARP5 actin related protein 5 homolog06.6
SETD6SET domain containing 607.2
JADE1jade family PHD finger 108.1
PHC3polyhomeotic homolog 307.4
MLLT10myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1007
TET1tet methylcytosine dioxygenase 106.45
EPC1enhancer of polycomb homolog 104.6
ASXL3additional sex combs like 3, transcriptional regulator04
KDM7Alysine demethylase 7A04.95
SETD7SET domain containing lysine methyltransferase 7010.1
KMT2Dlysine methyltransferase 2D06.6
FXR1FMR1 autosomal homolog 107.3
YEATS4YEATS domain containing 407.5
TDRD3tudor domain containing 307.2
AKAP1A-kinase anchoring protein 108.2
DPF1double PHD fingers 105.9
BAP1BRCA1 associated protein 107.6
L3MBTL2L3MBTL2 polycomb repressive complex 1 subunit07.3
SETDB2SET domain bifurcated 205.2
TAF3TATA-box binding protein associated factor 306.4
HDAC10histone deacetylase 1004.6
CHD6chromodomain helicase DNA binding protein 604.8
SETD3SET domain containing 307.1
ING5inhibitor of growth family member 506.25
RAD54LRAD54 like (S. cerevisiae)07.7
DOT1LDOT1 like histone lysine methyltransferase06.1
L3MBTL3l(3)mbt-like 3 (Drosophila)06.3
TTF2transcription termination factor 208.7
ZGPATzinc finger CCCH-type and G-patch domain containing07.7
GLYR1glyoxylate reductase 1 homolog06.25
KDM2Blysine demethylase 2B08.6
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 509.5
CBX2chromobox 205.2
PCGF1polycomb group ring finger 108.75
KMT5Clysine methyltransferase 5C05.2
LMNB2lamin B207.75
RIOX2ribosomal oxygenase 208.5
MUM1melanoma associated antigen (mutated) 107.1
HAT1histone acetyltransferase 1011.2
CBX4chromobox 408.3
RUVBL1RuvB like AAA ATPase 1010
ACTL6Aactin like 6A010.3
EEDembryonic ectoderm development06
HDAC3histone deacetylase 309
ALKBH1alkB homolog 1, histone H2A dioxygenase07
KAT2Blysine acetyltransferase 2B08.35
MBD4methyl-CpG binding domain 4, DNA glycosylase09.7
MBD2methyl-CpG binding domain protein 204.2
BAZ1Bbromodomain adjacent to zinc finger domain 1B08.35
BTAF1B-TFIID TATA-box binding protein associated factor 108.9
ASH2LASH2 like histone lysine methyltransferase complex subunit010.1
PYGO2pygopus family PHD finger 207
PRMT9protein arginine methyltransferase 908
MTA1metastasis associated 106.7
L3MBTL4l(3)mbt-like 4 (Drosophila)04.2
ZMYM4zinc finger MYM-type containing 408.95
ZMYM6zinc finger MYM-type containing 606.6
ZMYM5zinc finger MYM-type containing 505.9
MTA2metastasis associated 1 family member 204.85
GLYATL1glycine-N-acyltransferase like 103.85
PRDM6PR/SET domain 605.05
GTF3C4general transcription factor IIIC subunit 408.65
SP140LSP140 nuclear body protein like08.45
ACTR8ARP8 actin related protein 8 homolog07.1
CDYLchromodomain Y like08.6
FXR2FMR1 autosomal homolog 207.4
CLOCKclock circadian regulator08.85
NCOR1nuclear receptor corepressor 107.8
PHF14PHD finger protein 1407.2
KDM4Alysine demethylase 4A07.4
HDAC9histone deacetylase 905.3
SETD1ASET domain containing 1A05.35
KMT2Blysine methyltransferase 2B05
TRIM66tripartite motif containing 6605.2