Browse for cancer cell lines from large intestine

  Summary of CRs for cancer cell lines from large intestine .
Gene Symbol Gene Name % Mutation Median Expr. (Microarray)
KMT2Clysine methyltransferase 2C54.398.1
CHD9chromodomain helicase DNA binding protein 935.098.4
NIPBLNIPBL, cohesin loading factor33.338.4
TRRAPtransformation/transcription domain associated protein31.588.4
CREBBPCREB binding protein28.076.7
EP300E1A binding protein p30028.078
MSH6mutS homolog 628.079.5
CHD8chromodomain helicase DNA binding protein 828.077.8
ATRXATRX, chromatin remodeler28.07NA
KAT6Blysine acetyltransferase 6B28.07NA
BRD3bromodomain containing 326.329.1
TET1tet methylcytosine dioxygenase 126.325.8
TAF1LTATA-box binding protein associated factor 1 like24.564.3
KDM5Alysine demethylase 5A22.816.8
KAT6Alysine acetyltransferase 6A22.81NA
CHD1chromodomain helicase DNA binding protein 121.059.5
DNMT3BDNA methyltransferase 3 beta21.057.2
PHF3PHD finger protein 321.058.5
JARID2jumonji and AT-rich interaction domain containing 221.057
KMT2Alysine methyltransferase 2A21.057.7
NSD1nuclear receptor binding SET domain protein 121.055.9
ZMYM2zinc finger MYM-type containing 221.055.7
NCOA3nuclear receptor coactivator 321.057.8
ARID1AAT-rich interaction domain 1A21.058.5
NCOA2nuclear receptor coactivator 219.35.1
MGAMGA, MAX dimerization protein19.38
HDAC2histone deacetylase 219.37.3
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 419.39.4
NSD2nuclear receptor binding SET domain protein 219.38
BRD4bromodomain containing 417.547.9
CHD5chromodomain helicase DNA binding protein 517.544.1
PRDM16PR/SET domain 1615.793.7
TP53BP1tumor protein p53 binding protein 115.796.5
ERCC6ERCC excision repair 6, chromatin remodeling factor14.045.5
HNF1AHNF1 homeobox A14.045.4
TRIM24tripartite motif containing 2414.049.7
IKZF1IKAROS family zinc finger 112.283.9
HDAC1histone deacetylase 112.2810.6
IDH1isocitrate dehydrogenase (NADP(+)) 1, cytosolic12.2812.7
LMNAlamin A/C12.289.6
PHIPpleckstrin homology domain interacting protein12.289.4
HDAC4histone deacetylase 412.286.3
BAG6BCL2 associated athanogene 612.28NA
TAF1TATA-box binding protein associated factor 112.28NA
SUZ12SUZ12 polycomb repressive complex 2 subunit10.5310.6
NSD3nuclear receptor binding SET domain protein 310.537.2
MLLT10myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1010.537.5
BAP1BRCA1 associated protein 110.537.4
NCOA1nuclear receptor coactivator 110.537.6
KAT7lysine acetyltransferase 710.53NA
SIRT1sirtuin 18.778.8
TFPTTCF3 fusion partner8.776.9
TRIM33tripartite motif containing 338.778.9
TET2tet methylcytosine dioxygenase 28.776
STK31serine/threonine kinase 318.774.6
EP400E1A binding protein p4008.777.6
SETDB1SET domain bifurcated 18.776.8
KDM6Alysine demethylase 6A8.77NA
PSIP1PC4 and SFRS1 interacting protein 17.029.5
SP140SP140 nuclear body protein7.024
MLLT6MLLT6, PHD finger domain containing7.028.3
LMNB2lamin B27.027.9
HDAC3histone deacetylase 37.028.9
HDAC6histone deacetylase 67.02NA
TRIM28tripartite motif containing 285.2610.3
IDH2isocitrate dehydrogenase (NADP(+)) 2, mitochondrial5.2610
SP110SP110 nuclear body protein5.266.6
ING1inhibitor of growth family member 15.268
MEN1menin 15.268.6
BRD2bromodomain containing 25.269.9
NCOA4nuclear receptor coactivator 45.2612.2
MBD6methyl-CpG binding domain protein 63.517.9
ATF2activating transcription factor 23.515.8
DNMT1DNA methyltransferase 13.5111.5
LMNB1lamin B13.519.7
ARID1BAT-rich interaction domain 1B3.516.9
SETSET nuclear proto-oncogene3.5112.5
BRDTbromodomain testis associated3.513.8
ASH2LASH2 like histone lysine methyltransferase complex subunit3.519.9
BMI1BMI1 proto-oncogene, polycomb ring finger3.51NA
SETD1BSET domain containing 1B1.759.3
REREarginine-glutamic acid dipeptide repeats1.755.3
SFMBT2Scm-like with four mbt domains 21.754.1
ATXN7ataxin 71.756.7
SMARCA2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 21.757.4
SMARCB1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 11.759
YY1YY1 transcription factor1.7511.8
HDAC10histone deacetylase 101.754.7
TNRC18trinucleotide repeat containing 181.756.2
ZMYM5zinc finger MYM-type containing 51.756.4
HDAC5histone deacetylase 505.4
PRMT3protein arginine methyltransferase 3010.2
SMNDC1survival motor neuron domain containing 1010.6
SMYD5SMYD family member 507
PRMT5protein arginine methyltransferase 5010.6
CARM1coactivator associated arginine methyltransferase 109.2
KAT5lysine acetyltransferase 508
CTCFCCCTC-binding factor010
RAI1retinoic acid induced 107.1
KDM5Blysine demethylase 5B08.7
ZMYND11zinc finger MYND-type containing 1107.6
SRCAPSnf2 related CREBBP activator protein05.3
RUVBL2RuvB like AAA ATPase 2011.4
BRD8bromodomain containing 807.8
EHMT2euchromatic histone lysine methyltransferase 207.1
MORF4L1mortality factor 4 like 1012.7
TDRKHtudor and KH domain containing05.1
CHD2chromodomain helicase DNA binding protein 207.9
CHD3chromodomain helicase DNA binding protein 306.5
DIDO1death inducer-obliterator 107.3
CHD4chromodomain helicase DNA binding protein 409.5
WDR5WD repeat domain 508.3
PRDM7PR/SET domain 704
PRDM5PR/SET domain 504.1
PRDM4PR/SET domain 408.5
BAZ2Abromodomain adjacent to zinc finger domain 2A06.5
BAZ1Abromodomain adjacent to zinc finger domain 1A09.6
SGF29SAGA complex associated factor 2908.1
PHF21BPHD finger protein 21B03.7
CBX3chromobox 3012.4
SMYD4SET and MYND domain containing 407.4
UHRF2ubiquitin like with PHD and ring finger domains 2010
AEBP2AE binding protein 206.6
TDRD9tudor domain containing 903.8
CDYL2chromodomain Y like 205.1
INO80CINO80 complex subunit C09.7
TDRD10tudor domain containing 1004.3
SETD9SET domain containing 908.2
NCOA7nuclear receptor coactivator 7010
PHF13PHD finger protein 1309.2
SMYD1SET and MYND domain containing 103.8
ZCWPW2zinc finger CW-type and PWWP domain containing 203.5
KIAA2026KIAA202607.5
DAXXdeath domain associated protein08
TDRD5tudor domain containing 504.1
PWWP2BPWWP domain containing 2B05.7
ASXL1additional sex combs like 1, transcriptional regulator08.3
TRDMT1tRNA aspartic acid methyltransferase 106
DNMT3ADNA methyltransferase 3 alpha05.5
DUSP1dual specificity phosphatase 106.4
PHC2polyhomeotic homolog 2010
ARID2AT-rich interaction domain 208.4
TET3tet methylcytosine dioxygenase 306.8
EYA4EYA transcriptional coactivator and phosphatase 404
MECOMMDS1 and EVI1 complex locus08.7
EYA1EYA transcriptional coactivator and phosphatase 103.9
EYA2EYA transcriptional coactivator and phosphatase 204.1
EYA3EYA transcriptional coactivator and phosphatase 306.9
EZH1enhancer of zeste 1 polycomb repressive complex 2 subunit07
EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit09.9
BPTFbromodomain PHD finger transcription factor08.5
JMJD1Cjumonji domain containing 1C07.8
ALKBH3alkB homolog 3, alpha-ketoglutaratedependent dioxygenase08.9
TDRD6tudor domain containing 603.9
KDM1Blysine demethylase 1B06.4
MTF2metal response element binding transcription factor 208
BAHD1bromo adjacent homology domain containing 105.8
DHX30DExH-box helicase 3009
SIRT2sirtuin 207.4
SCMH1sex comb on midleg homolog 1 (Drosophila)07
KDM2Alysine demethylase 2A07.8
KDM1Alysine demethylase 1A09.3
KDM4Blysine demethylase 4B07.4
NCOA6nuclear receptor coactivator 609.9
KDM4Clysine demethylase 4C06.4
POGZpogo transposable element derived with ZNF domain08.6
KDM6Blysine demethylase 6B05.7
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component07.4
JMJD6arginine demethylase and lysine hydroxylase06.1
JADE2jade family PHD finger 207.3
SMCHD1structural maintenance of chromosomes flexible hinge domain containing 108.3
PHF24PHD finger protein 2403.9
ADNPactivity dependent neuroprotector homeobox010.6
SIRT5sirtuin 506.4
SIRT4sirtuin 404.3
SIRT3sirtuin 306.8
TDRD7tudor domain containing 708.7
CBX6chromobox 608.2
CBX5chromobox 508.3
CBX7chromobox 706.8
ZMYND8zinc finger MYND-type containing 809.5
BRD1bromodomain containing 107.9
ZBTB38zinc finger and BTB domain containing 3808.6
GABRG1gamma-aminobutyric acid type A receptor gamma1 subunit03.6
SHPRHSNF2 histone linker PHD RING helicase08.4
SETBP1SET binding protein 104.2
EPC2enhancer of polycomb homolog 208
PHF19PHD finger protein 1909.1
KAT2Alysine acetyltransferase 2A08.4
SND1staphylococcal nuclease and tudor domain containing 1010.3
BRPF3bromodomain and PHD finger containing 306.3
CECR2CECR2, histone acetyl-lysine reader04.1
ATAD2ATPase family, AAA domain containing 209.7
SETD2SET domain containing 207.6
BRD7bromodomain containing 709.5
GTF3C1general transcription factor IIIC subunit 108.2
HCFC2host cell factor C205.7
DNMT3LDNA methyltransferase 3 like04.4
BAZ2Bbromodomain adjacent to zinc finger domain 2B08.8
HDGFheparin binding growth factor011.3
HELLShelicase, lymphoid-specific09.3
CXXC1CXXC finger protein 108.2
AIREautoimmune regulator04.7
PRMT2protein arginine methyltransferase 207.2
PRMT1protein arginine methyltransferase 1012.2
APOBEC1apolipoprotein B mRNA editing enzyme catalytic subunit 104.4
ING2inhibitor of growth family member 208.9
KMT5Alysine methyltransferase 5A08
LBRlamin B receptor011.5
MBD1methyl-CpG binding domain protein 106.7
MGMTO-6-methylguanine-DNA methyltransferase08.8
PHF20L1PHD finger protein 20-like 107.2
KMT5Blysine methyltransferase 5B09
PCNAproliferating cell nuclear antigen012.7
PHF11PHD finger protein 1109.4
ING4inhibitor of growth family member 407.2
PHF20PHD finger protein 2008.3
PHF21APHD finger protein 21A06
ACTL6Bactin like 6B04.2
SFMBT1Scm-like with four mbt domains 106.4
PHF7PHD finger protein 704.8
SIRT7sirtuin 708.8
SIRT6sirtuin 606.3
HDAC7histone deacetylase 706.2
ARID4BAT-rich interaction domain 4B08.3
RSF1remodeling and spacing factor 107.8
KDM3Blysine demethylase 3B09.1
PHF1PHD finger protein 107.6
PHF2PHD finger protein 208.3
MBD3methyl-CpG binding domain protein 308.3
BRWD1bromodomain and WD repeat domain containing 106.4
SETD4SET domain containing 407.3
POLE3DNA polymerase epsilon 3, accessory subunit010.4
CHRAC1chromatin accessibility complex 107.5
ATAD2BATPase family, AAA domain containing 2B06.3
PRMT7protein arginine methyltransferase 707
ING3inhibitor of growth family member 307.5
INO80INO80 complex subunit08.1
MPHOSPH8M-phase phosphoprotein 808.9
MBTD1mbt domain containing 107.6
GATAD2AGATA zinc finger domain containing 2A08.2
ZCWPW1zinc finger CW-type and PWWP domain containing 105.4
ELP3elongator acetyltransferase complex subunit 308.7
UBR7ubiquitin protein ligase E3 component n-recognin 7 (putative)09.4
PRMT6protein arginine methyltransferase 607.5
PBRM1polybromo 107.4
SETD5SET domain containing 507.6
ASXL2additional sex combs like 2, transcriptional regulator06.5
MRGBPMRG domain binding protein09.5
PHF10PHD finger protein 1009.5
CHD7chromodomain helicase DNA binding protein 708.2
PPP4R3Aprotein phosphatase 4 regulatory subunit 3A08.3
KDM4Dlysine demethylase 4D04.4
ATF7IPactivating transcription factor 7 interacting protein09
MBD5methyl-CpG binding domain protein 504.5
KDM3Alysine demethylase 3A09.3
ASH1LASH1 like histone lysine methyltransferase09.3
KMT2Elysine methyltransferase 2E09.5
DMAP1DNA methyltransferase 1 associated protein 107.6
RNF17ring finger protein 1703.9
TDRD1tudor domain containing 103.6
PRMT8protein arginine methyltransferase 804.3
SMYD2SET and MYND domain containing 2010.4
PRDM8PR/SET domain 803.9
PRDM9PR/SET domain 903.6
PRDM10PR/SET domain 1006.6
PRDM11PR/SET domain 1104.2
INTS12integrator complex subunit 1209.1
PPP4R3Bprotein phosphatase 4 regulatory subunit 3B08.9
CBX8chromobox 806
AICDAactivation induced cytidine deaminase03.8
GATAD2BGATA zinc finger domain containing 2B06.8
MTA3metastasis associated 1 family member 308.4
BAHCC1BAH domain and coiled-coil containing 105
PHF12PHD finger protein 1205.8
ZBTB4zinc finger and BTB domain containing 408.2
PHRF1PHD and ring finger domains 107
NCOA5nuclear receptor coactivator 506.8
RAG2recombination activating 203.5
ACTA1actin, alpha 1, skeletal muscle04.1
ARID4AAT-rich interaction domain 4A06.7
RBBP4RB binding protein 4, chromatin remodeling factor07.6
RBBP5RB binding protein 5, histone lysine methyltransferase complex subunit07.2
PRDM12PR/SET domain 1204
PRDM13PR/SET domain 1304.3
DPF2double PHD fingers 209
RING1ring finger protein 108.7
RNF2ring finger protein 207.1
ACTBactin beta012.9
PRDM15PR/SET domain 1504.8
PRDM14PR/SET domain 1405
PRDM1PR/SET domain 106
SETMARSET domain and mariner transposase fusion gene08.1
ACTR6ARP6 actin related protein 6 homolog09.9
SMYD3SET and MYND domain containing 308.6
MEAF6MYST/Esa1 associated factor 606.8
BRD9bromodomain containing 907.8
SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 109.1
SMARCC2SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 208.1
SMARCD1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 106.5
SMARCD2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 208.5
SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 305.2
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1010.7
SP100SP100 nuclear antigen07
TCF19transcription factor 1907.1
TCF20transcription factor 2008.8
VPS72vacuolar protein sorting 72 homolog09.9
PCGF2polycomb group ring finger 206.4
PRDM2PR/SET domain 206.2
BRPF1bromodomain and PHD finger containing 107.9
FTOFTO, alpha-ketoglutarate dependent dioxygenase08.7
PHF23PHD finger protein 2308.3
RIOX1ribosomal oxygenase 108.4
TBL1XR1transducin beta like 1 X-linked receptor 109.7
SUV39H2suppressor of variegation 3-9 homolog 207.2
EHMT1euchromatic histone lysine methyltransferase 107.2
ZMYM1zinc finger MYM-type containing 107.6
KDM8lysine demethylase 804.3
HDAC11histone deacetylase 1106.2
ACTR5ARP5 actin related protein 5 homolog07.4
SETD6SET domain containing 608.3
JADE1jade family PHD finger 107.3
PHC3polyhomeotic homolog 307.6
EPC1enhancer of polycomb homolog 104.9
ASXL3additional sex combs like 3, transcriptional regulator04
KDM7Alysine demethylase 7A07.2
SETD7SET domain containing lysine methyltransferase 7010.1
KMT2Dlysine methyltransferase 2D07
FXR1FMR1 autosomal homolog 106.8
YEATS4YEATS domain containing 408.3
TDRD3tudor domain containing 307.8
AKAP1A-kinase anchoring protein 1010.1
DPF1double PHD fingers 105.5
L3MBTL2L3MBTL2 polycomb repressive complex 1 subunit07.4
SETDB2SET domain bifurcated 205.9
TAF3TATA-box binding protein associated factor 306.6
CHD6chromodomain helicase DNA binding protein 604.6
SETD3SET domain containing 307.9
ING5inhibitor of growth family member 506.8
RAD54LRAD54 like (S. cerevisiae)07.9
DOT1LDOT1 like histone lysine methyltransferase06.3
L3MBTL3l(3)mbt-like 3 (Drosophila)06.3
TTF2transcription termination factor 209
ZGPATzinc finger CCCH-type and G-patch domain containing07.7
GLYR1glyoxylate reductase 1 homolog06.5
KDM2Blysine demethylase 2B09.1
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 509.9
CBX2chromobox 205.5
PCGF1polycomb group ring finger 108.8
KMT5Clysine methyltransferase 5C05.5
RIOX2ribosomal oxygenase 209
MUM1melanoma associated antigen (mutated) 107.1
HAT1histone acetyltransferase 1011.2
CBX4chromobox 408.5
RUVBL1RuvB like AAA ATPase 1010.4
ACTL6Aactin like 6A010.7
EEDembryonic ectoderm development06.1
ALKBH1alkB homolog 1, histone H2A dioxygenase07.2
KAT2Blysine acetyltransferase 2B06.5
MBD4methyl-CpG binding domain 4, DNA glycosylase09.8
MBD2methyl-CpG binding domain protein 204.2
BAZ1Bbromodomain adjacent to zinc finger domain 1B08.1
BTAF1B-TFIID TATA-box binding protein associated factor 109.5
PYGO2pygopus family PHD finger 207.2
PRMT9protein arginine methyltransferase 908.2
MTA1metastasis associated 107.3
L3MBTL4l(3)mbt-like 4 (Drosophila)04.1
ZMYM4zinc finger MYM-type containing 408.5
ZMYM6zinc finger MYM-type containing 606.6
MTA2metastasis associated 1 family member 205.3
GLYATL1glycine-N-acyltransferase like 103.8
PRDM6PR/SET domain 604.7
GTF3C4general transcription factor IIIC subunit 408.8
SP140LSP140 nuclear body protein like07.9
ACTR8ARP8 actin related protein 8 homolog07
CDYLchromodomain Y like08.6
FXR2FMR1 autosomal homolog 207.2
CLOCKclock circadian regulator08.9
NCOR1nuclear receptor corepressor 108.1
PHF14PHD finger protein 1407
KDM4Alysine demethylase 4A07.6
HDAC9histone deacetylase 904.2
SETD1ASET domain containing 1A05.6
KMT2Blysine methyltransferase 2B05.3
TRIM66tripartite motif containing 6605.8