Browse for cancer cell lines from soft tissue

  Summary of CRs for cancer cell lines from soft tissue .
Gene Symbol Gene Name % Mutation Median Expr. (Microarray)
MGAMGA, MAX dimerization protein208.3
NCOA3nuclear receptor coactivator 3207.95
PHF3PHD finger protein 3158.45
EP400E1A binding protein p400157.75
TET1tet methylcytosine dioxygenase 1157.7
NCOA1nuclear receptor coactivator 1157.9
TAF1LTATA-box binding protein associated factor 1 like104.4
DNMT3BDNA methyltransferase 3 beta107.7
KMT2Alysine methyltransferase 2A107.7
KMT2Clysine methyltransferase 2C107.7
NSD1nuclear receptor binding SET domain protein 1105.9
TP53BP1tumor protein p53 binding protein 1107.15
ATRXATRX, chromatin remodeler10NA
NCOA2nuclear receptor coactivator 255.25
CHD1chromodomain helicase DNA binding protein 159.3
ATF2activating transcription factor 256.55
CREBBPCREB binding protein56.7
BRD4bromodomain containing 458.35
NIPBLNIPBL, cohesin loading factor58.15
HDAC2histone deacetylase 257.3
IDH1isocitrate dehydrogenase (NADP(+)) 1, cytosolic511.5
MLLT6MLLT6, PHD finger domain containing57.1
TET2tet methylcytosine dioxygenase 256.3
NSD3nuclear receptor binding SET domain protein 357.15
CHD8chromodomain helicase DNA binding protein 858.25
SETSET nuclear proto-oncogene512.15
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 459.55
SMARCB1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 158.9
BRDTbromodomain testis associated53.8
NSD2nuclear receptor binding SET domain protein 258.2
ZMYM2zinc finger MYM-type containing 255.45
BRD3bromodomain containing 359
CHD9chromodomain helicase DNA binding protein 959.1
MLLT10myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1057.75
ARID1AAT-rich interaction domain 1A58.8
TRRAPtransformation/transcription domain associated protein58.35
TNRC18trinucleotide repeat containing 1856
LMNB2lamin B257.95
TRIM24tripartite motif containing 2459.35
SETDB1SET domain bifurcated 156.6
BAG6BCL2 associated athanogene 65NA
HDAC5histone deacetylase 505.75
TRIM28tripartite motif containing 28010.45
PRMT3protein arginine methyltransferase 309.75
SMNDC1survival motor neuron domain containing 1010.7
IKZF1IKAROS family zinc finger 103.9
SMYD5SMYD family member 507
PRMT5protein arginine methyltransferase 5010.65
CARM1coactivator associated arginine methyltransferase 109.05
KAT5lysine acetyltransferase 507.95
CTCFCCCTC-binding factor09.85
RAI1retinoic acid induced 107.25
KDM5Blysine demethylase 5B08.85
ZMYND11zinc finger MYND-type containing 1107.9
SRCAPSnf2 related CREBBP activator protein05.25
RUVBL2RuvB like AAA ATPase 2011.6
BRD8bromodomain containing 807.9
EHMT2euchromatic histone lysine methyltransferase 207.05
MORF4L1mortality factor 4 like 1013.1
TDRKHtudor and KH domain containing04.65
CHD2chromodomain helicase DNA binding protein 207.7
CHD3chromodomain helicase DNA binding protein 307
DIDO1death inducer-obliterator 107.2
CHD4chromodomain helicase DNA binding protein 409.55
WDR5WD repeat domain 508.3
PRDM7PR/SET domain 704.1
PRDM5PR/SET domain 504.4
PRDM4PR/SET domain 408.3
PSIP1PC4 and SFRS1 interacting protein 1010.7
BAZ2Abromodomain adjacent to zinc finger domain 2A06.3
BAZ1Abromodomain adjacent to zinc finger domain 1A09.25
SP140SP140 nuclear body protein04.15
SGF29SAGA complex associated factor 2907.9
PHF21BPHD finger protein 21B03.85
CBX3chromobox 3012.15
MBD6methyl-CpG binding domain protein 607.55
SMYD4SET and MYND domain containing 407.45
UHRF2ubiquitin like with PHD and ring finger domains 2010.1
AEBP2AE binding protein 206.5
TDRD9tudor domain containing 903.9
CDYL2chromodomain Y like 205.2
INO80CINO80 complex subunit C09.3
TDRD10tudor domain containing 1004.2
SETD9SET domain containing 908.05
NCOA7nuclear receptor coactivator 708.75
PHF13PHD finger protein 13010.2
SMYD1SET and MYND domain containing 103.9
ZCWPW2zinc finger CW-type and PWWP domain containing 203.7
KIAA2026KIAA202607.35
DAXXdeath domain associated protein08.35
TDRD5tudor domain containing 504.1
PWWP2BPWWP domain containing 2B05.15
ASXL1additional sex combs like 1, transcriptional regulator08.6
DNMT1DNA methyltransferase 1011.7
TRDMT1tRNA aspartic acid methyltransferase 106.75
DNMT3ADNA methyltransferase 3 alpha05.45
DUSP1dual specificity phosphatase 107.45
PHC2polyhomeotic homolog 2010.1
ARID2AT-rich interaction domain 208.3
TET3tet methylcytosine dioxygenase 306.4
EP300E1A binding protein p30008.15
EYA4EYA transcriptional coactivator and phosphatase 406
ERCC6ERCC excision repair 6, chromatin remodeling factor05.45
MECOMMDS1 and EVI1 complex locus04.5
EYA1EYA transcriptional coactivator and phosphatase 104.35
EYA2EYA transcriptional coactivator and phosphatase 204.2
EYA3EYA transcriptional coactivator and phosphatase 307.15
EZH1enhancer of zeste 1 polycomb repressive complex 2 subunit07.1
EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit09.75
BPTFbromodomain PHD finger transcription factor08.6
JMJD1Cjumonji domain containing 1C08
ALKBH3alkB homolog 3, alpha-ketoglutaratedependent dioxygenase08.7
TDRD6tudor domain containing 603.75
KDM1Blysine demethylase 1B05.65
MTF2metal response element binding transcription factor 208.5
BAHD1bromo adjacent homology domain containing 105.8
DHX30DExH-box helicase 3009.2
SIRT2sirtuin 208
SCMH1sex comb on midleg homolog 1 (Drosophila)07.5
KDM2Alysine demethylase 2A07.6
KDM1Alysine demethylase 1A09.4
KDM4Blysine demethylase 4B07.45
NCOA6nuclear receptor coactivator 609.7
SETD1BSET domain containing 1B09.1
KDM4Clysine demethylase 4C05.9
POGZpogo transposable element derived with ZNF domain09
KDM6Blysine demethylase 6B05.6
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component07.5
JMJD6arginine demethylase and lysine hydroxylase06.5
JADE2jade family PHD finger 207.2
SMCHD1structural maintenance of chromosomes flexible hinge domain containing 108.7
PHF24PHD finger protein 2403.9
ADNPactivity dependent neuroprotector homeobox010.5
SIRT5sirtuin 506.15
SIRT4sirtuin 404.6
SIRT3sirtuin 306.9
SIRT1sirtuin 108.9
TDRD7tudor domain containing 708.05
CBX6chromobox 609.45
CBX5chromobox 508.75
CBX7chromobox 706.3
SUZ12SUZ12 polycomb repressive complex 2 subunit010.4
ZMYND8zinc finger MYND-type containing 809.95
BRD1bromodomain containing 107.6
ZBTB38zinc finger and BTB domain containing 3808.55
GABRG1gamma-aminobutyric acid type A receptor gamma1 subunit03.6
SHPRHSNF2 histone linker PHD RING helicase08.4
CHD5chromodomain helicase DNA binding protein 504.2
SETBP1SET binding protein 106.05
EPC2enhancer of polycomb homolog 208
PHF19PHD finger protein 1909.15
KAT2Alysine acetyltransferase 2A08.2
SND1staphylococcal nuclease and tudor domain containing 1010
BRPF3bromodomain and PHD finger containing 306.2
CECR2CECR2, histone acetyl-lysine reader04.1
ATAD2ATPase family, AAA domain containing 209.4
SETD2SET domain containing 207.6
BRD7bromodomain containing 708.9
MSH6mutS homolog 6010.4
GTF3C1general transcription factor IIIC subunit 108.6
TFPTTCF3 fusion partner08.05
HCFC2host cell factor C206.8
DNMT3LDNA methyltransferase 3 like04.4
BAZ2Bbromodomain adjacent to zinc finger domain 2B07.8
HDAC1histone deacetylase 1010.5
HDGFheparin binding growth factor011.1
HELLShelicase, lymphoid-specific08.9
CXXC1CXXC finger protein 108.6
AIREautoimmune regulator04.7
PRMT2protein arginine methyltransferase 207.65
PRMT1protein arginine methyltransferase 1012.4
APOBEC1apolipoprotein B mRNA editing enzyme catalytic subunit 103.8
IDH2isocitrate dehydrogenase (NADP(+)) 2, mitochondrial09.2
SP110SP110 nuclear body protein06.95
ING1inhibitor of growth family member 107.3
ING2inhibitor of growth family member 209.3
JARID2jumonji and AT-rich interaction domain containing 207.5
KMT5Alysine methyltransferase 5A07.95
LBRlamin B receptor010.75
LMNAlamin A/C09.4
LMNB1lamin B1010.1
MBD1methyl-CpG binding domain protein 106.9
MEN1menin 108.95
MGMTO-6-methylguanine-DNA methyltransferase08.2
REREarginine-glutamic acid dipeptide repeats05.3
PHF20L1PHD finger protein 20-like 107.3
KMT5Blysine methyltransferase 5B08.8
PCNAproliferating cell nuclear antigen012.5
PHF11PHD finger protein 1108.65
ING4inhibitor of growth family member 407.25
PHF20PHD finger protein 2008.45
PHF21APHD finger protein 21A06.9
ACTL6Bactin like 6B04.2
SFMBT1Scm-like with four mbt domains 105.8
PHF7PHD finger protein 704.9
SIRT7sirtuin 708.15
SIRT6sirtuin 606.2
HDAC7histone deacetylase 706.45
TRIM33tripartite motif containing 3308.75
ARID4BAT-rich interaction domain 4B08.35
RSF1remodeling and spacing factor 108.05
KDM3Blysine demethylase 3B08.7
PHF1PHD finger protein 108.3
PHF2PHD finger protein 208.2
MBD3methyl-CpG binding domain protein 308.7
BRWD1bromodomain and WD repeat domain containing 105.9
SETD4SET domain containing 407.2
POLE3DNA polymerase epsilon 3, accessory subunit010.3
CHRAC1chromatin accessibility complex 107.55
ATAD2BATPase family, AAA domain containing 2B06.25
PRMT7protein arginine methyltransferase 706.8
ING3inhibitor of growth family member 307.45
INO80INO80 complex subunit07.95
MPHOSPH8M-phase phosphoprotein 808.4
MBTD1mbt domain containing 107.2
GATAD2AGATA zinc finger domain containing 2A08.1
PHIPpleckstrin homology domain interacting protein09.4
ZCWPW1zinc finger CW-type and PWWP domain containing 105.5
ELP3elongator acetyltransferase complex subunit 308.75
UBR7ubiquitin protein ligase E3 component n-recognin 7 (putative)09.55
PRMT6protein arginine methyltransferase 607.95
PBRM1polybromo 107.6
SETD5SET domain containing 507.95
ASXL2additional sex combs like 2, transcriptional regulator06.45
MRGBPMRG domain binding protein09.3
PHF10PHD finger protein 1009.7
CHD7chromodomain helicase DNA binding protein 707.35
PPP4R3Aprotein phosphatase 4 regulatory subunit 3A08.3
KDM4Dlysine demethylase 4D04.85
ATF7IPactivating transcription factor 7 interacting protein09.4
MBD5methyl-CpG binding domain protein 505.25
KDM3Alysine demethylase 3A09.55
ASH1LASH1 like histone lysine methyltransferase09.2
KMT2Elysine methyltransferase 2E09.15
DMAP1DNA methyltransferase 1 associated protein 108.1
RNF17ring finger protein 1703.95
STK31serine/threonine kinase 3103.9
TDRD1tudor domain containing 103.6
PRMT8protein arginine methyltransferase 804.3
SMYD2SET and MYND domain containing 2010
PRDM8PR/SET domain 803.9
PRDM9PR/SET domain 903.6
PRDM10PR/SET domain 1006.7
PRDM11PR/SET domain 1104.2
INTS12integrator complex subunit 1209.3
PPP4R3Bprotein phosphatase 4 regulatory subunit 3B08.75
CBX8chromobox 805.95
AICDAactivation induced cytidine deaminase03.8
GATAD2BGATA zinc finger domain containing 2B06.9
ARID1BAT-rich interaction domain 1B07
MTA3metastasis associated 1 family member 308.7
BAHCC1BAH domain and coiled-coil containing 104.85
PHF12PHD finger protein 1206.1
ZBTB4zinc finger and BTB domain containing 408.55
PHRF1PHD and ring finger domains 106.9
SFMBT2Scm-like with four mbt domains 204.85
NCOA5nuclear receptor coactivator 506.7
RAG2recombination activating 203.5
ACTA1actin, alpha 1, skeletal muscle04.1
ARID4AAT-rich interaction domain 4A06.6
KDM5Alysine demethylase 5A07.05
RBBP4RB binding protein 4, chromatin remodeling factor07.8
RBBP5RB binding protein 5, histone lysine methyltransferase complex subunit07.05
PRDM12PR/SET domain 1204
PRDM13PR/SET domain 1304.3
DPF2double PHD fingers 209.15
RING1ring finger protein 109.15
RNF2ring finger protein 207.1
BRD2bromodomain containing 209.85
ACTBactin beta013.1
ATXN7ataxin 706.6
PRDM16PR/SET domain 1603.95
PRDM15PR/SET domain 1504.85
PRDM14PR/SET domain 1405.05
PRDM1PR/SET domain 104.9
SETMARSET domain and mariner transposase fusion gene08.45
ACTR6ARP6 actin related protein 6 homolog09.7
SMYD3SET and MYND domain containing 308.5
MEAF6MYST/Esa1 associated factor 606.75
SMARCA2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 207.05
BRD9bromodomain containing 907.8
SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 109
SMARCC2SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 208.15
SMARCD1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 106.5
SMARCD2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 207.4
SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 308.3
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1011
SP100SP100 nuclear antigen06.9
HNF1AHNF1 homeobox A04.2
TCF19transcription factor 1907.6
TCF20transcription factor 2008.2
VPS72vacuolar protein sorting 72 homolog09.9
YY1YY1 transcription factor011.7
PCGF2polycomb group ring finger 207
PRDM2PR/SET domain 206.2
BRPF1bromodomain and PHD finger containing 108.1
FTOFTO, alpha-ketoglutarate dependent dioxygenase09.4
PHF23PHD finger protein 2309
RIOX1ribosomal oxygenase 108.05
TBL1XR1transducin beta like 1 X-linked receptor 109.1
SUV39H2suppressor of variegation 3-9 homolog 207.3
EHMT1euchromatic histone lysine methyltransferase 107.3
ZMYM1zinc finger MYM-type containing 108.2
KDM8lysine demethylase 804.5
HDAC11histone deacetylase 1106
ACTR5ARP5 actin related protein 5 homolog07
SETD6SET domain containing 607.45
JADE1jade family PHD finger 108.3
PHC3polyhomeotic homolog 307.3
EPC1enhancer of polycomb homolog 104.9
NCOA4nuclear receptor coactivator 4011.85
ASXL3additional sex combs like 3, transcriptional regulator04.05
KDM7Alysine demethylase 7A05.3
SETD7SET domain containing lysine methyltransferase 709.95
KMT2Dlysine methyltransferase 2D06.9
FXR1FMR1 autosomal homolog 107.35
YEATS4YEATS domain containing 407.8
TDRD3tudor domain containing 307.35
AKAP1A-kinase anchoring protein 108.35
DPF1double PHD fingers 106.05
BAP1BRCA1 associated protein 107.55
L3MBTL2L3MBTL2 polycomb repressive complex 1 subunit07.45
SETDB2SET domain bifurcated 205.4
TAF3TATA-box binding protein associated factor 306.5
HDAC10histone deacetylase 1004.7
CHD6chromodomain helicase DNA binding protein 604.75
SETD3SET domain containing 307.65
ING5inhibitor of growth family member 506.95
RAD54LRAD54 like (S. cerevisiae)08.15
DOT1LDOT1 like histone lysine methyltransferase06.3
L3MBTL3l(3)mbt-like 3 (Drosophila)06.2
TTF2transcription termination factor 208.5
ZGPATzinc finger CCCH-type and G-patch domain containing07.75
GLYR1glyoxylate reductase 1 homolog06.45
KDM2Blysine demethylase 2B09
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 509.8
CBX2chromobox 205.45
PCGF1polycomb group ring finger 108.95
KMT5Clysine methyltransferase 5C05.55
RIOX2ribosomal oxygenase 208.5
MUM1melanoma associated antigen (mutated) 107.05
HAT1histone acetyltransferase 1011.4
CBX4chromobox 407.95
RUVBL1RuvB like AAA ATPase 1010.45
ACTL6Aactin like 6A010.3
EEDembryonic ectoderm development06.1
HDAC3histone deacetylase 309.1
ALKBH1alkB homolog 1, histone H2A dioxygenase07.3
KAT2Blysine acetyltransferase 2B07.35
MBD4methyl-CpG binding domain 4, DNA glycosylase09.5
MBD2methyl-CpG binding domain protein 204.3
BAZ1Bbromodomain adjacent to zinc finger domain 1B08.25
BTAF1B-TFIID TATA-box binding protein associated factor 109.3
ASH2LASH2 like histone lysine methyltransferase complex subunit010.15
PYGO2pygopus family PHD finger 206.9
PRMT9protein arginine methyltransferase 908.25
MTA1metastasis associated 107.5
L3MBTL4l(3)mbt-like 4 (Drosophila)04.15
ZMYM4zinc finger MYM-type containing 409.25
ZMYM6zinc finger MYM-type containing 606.6
ZMYM5zinc finger MYM-type containing 505.9
MTA2metastasis associated 1 family member 205.15
GLYATL1glycine-N-acyltransferase like 103.9
PRDM6PR/SET domain 605.05
GTF3C4general transcription factor IIIC subunit 409.2
SP140LSP140 nuclear body protein like08.1
ACTR8ARP8 actin related protein 8 homolog07.1
CDYLchromodomain Y like08.8
FXR2FMR1 autosomal homolog 207.45
CLOCKclock circadian regulator08.8
NCOR1nuclear receptor corepressor 108.05
PHF14PHD finger protein 1407.05
KDM4Alysine demethylase 4A07.8
HDAC9histone deacetylase 904.3
SETD1ASET domain containing 1A05.6
KMT2Blysine methyltransferase 2B05.2
HDAC4histone deacetylase 405.95
TRIM66tripartite motif containing 6605.4