CR2Cancer

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Domain, Function and Classification > Gene Ontology > KEGG and Reactome Pathway

> Domain, Function and Classification

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Domain

PF17035 Bromodomain extra-terminal - transcription regulation
PF00439 Bromodomain

Function

Binds hyperacetylated chromatin and plays a role in the regulation of transcription, probably by chromatin remodeling and interaction with transcription factors. Regulates transcription by promoting the binding of the transcription factor GATA1 to its targets (By similarity). Regulates transcription of the CCND1 gene.

Classification

Class	Modification	Substrate	Product	PubMed
Histone modification read	#	H3K9me2, H3K14me2, H4K5ac, H4K12ac	#	18406326

> Gene Ontology [ TOP ]
Biological Process	-
Molecular Function	GO:0003682 chromatin binding GO:0042393 histone binding GO:0070577 lysine-acetylated histone binding
Cellular Component	-

> KEGG and Reactome Pathway [ TOP ]
KEGG	-
Reactome	-

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Mutation landscape in primary tumor tissue from TCGA > Mutation landscape in cancer cell line from CCLE > All mutations from COSMIC database V81 > Variations from text mining

> The Cancer Genome Atlas (TCGA) [ TOP ]

> Cancer Cell Line Encyclopedia (CCLE) [ TOP ]

> Catalogue of Somatic Mutations in Cancer (COSMIC)

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COSMIC ID	CDS change	AA change	Mutation Type	Anatomical Site
COSM1106531	c.1928A>G	p.K643R	Substitution - Missense	Endometrium
COSM5979797	c.64C>T	p.P22S	Substitution - Missense	Upper_aerodigestive_tract
COSM3905428	c.888C>T	p.G296G	Substitution - coding silent	Stomach
COSM5606356	c.220C>T	p.H74Y	Substitution - Missense	Skin
COSM5955737	c.1968G>A	p.S656S	Substitution - coding silent	Upper_aerodigestive_tract
COSM1674941	c.1826C>T	p.S609F	Substitution - Missense	Oesophagus
COSM4588560	c.1206G>A	p.R402R	Substitution - coding silent	Bone
COSM5461076	c.850C>T	p.R284C	Substitution - Missense	Prostate
COSM4388465	c.1843G>C	p.E615Q	Substitution - Missense	Pancreas
COSM5919695	c.214-5C>T	p.?	Unknown	Skin
COSM3926396	c.633C>T	p.V211V	Substitution - coding silent	Skin
COSM5606356	c.220C>T	p.H74Y	Substitution - Missense	Skin
COSM5455757	c.1322G>A	p.R441H	Substitution - Missense	Large_intestine
COSM5088573	c.644delC	p.P215fs*28	Deletion - Frameshift	Large_intestine
COSM4666088	c.1768delG	p.E590fs*6	Deletion - Frameshift	Large_intestine
COSM1106558	c.885C>T	p.D295D	Substitution - coding silent	Endometrium
COSM3905436	c.89G>A	p.S30N	Substitution - Missense	Stomach
COSM4839529	c.468T>C	p.G156G	Substitution - coding silent	Cervix
COSM5635829	c.1833C>T	p.P611P	Substitution - coding silent	Oesophagus
COSM5723996	c.640C>T	p.P214S	Substitution - Missense	Skin
COSM3375157	c.588C>T	p.I196I	Substitution - coding silent	Thyroid
COSM3432965	c.946G>A	p.D316N	Substitution - Missense	Stomach
COSM1701904	c.889G>A	p.E297K	Substitution - Missense	Skin
COSM1106541	c.1659C>T	p.G553G	Substitution - coding silent	Endometrium
COSM1106529	c.1967C>T	p.S656L	Substitution - Missense	Endometrium
COSM1106556	c.900G>A	p.Q300Q	Substitution - coding silent	Endometrium
COSM4638061	c.1257C>T	p.P419P	Substitution - coding silent	Large_intestine
COSM4163506	c.1982C>T	p.A661V	Substitution - Missense	Thyroid
COSM3847990	c.1568T>G	p.V523G	Substitution - Missense	Breast
COSM5723996	c.640C>T	p.P214S	Substitution - Missense	Skin
COSM3655416	c.144G>A	p.K48K	Substitution - coding silent	Skin
COSM3847989	c.1653G>A	p.K551K	Substitution - coding silent	Breast
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Large_intestine
COSM4163507	c.936A>G	p.L312L	Substitution - coding silent	Thyroid
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Stomach
COSM3905422	c.1239C>G	p.A413A	Substitution - coding silent	Stomach
COSM4765960	c.72_73insC	p.E25fs*51	Insertion - Frameshift	Stomach
COSM5038460	c.595A>C	p.T199P	Substitution - Missense	Skin
COSM4761779	c.679G>A	p.V227I	Substitution - Missense	Stomach
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Large_intestine
COSM1106550	c.1064C>T	p.P355L	Substitution - Missense	Endometrium
COSM4786971	c.543C>T	p.T181T	Substitution - coding silent	Large_intestine
COSM3763733	c.1284C>T	p.P428P	Substitution - coding silent	Haematopoietic_and_lymphoid_tissue
COSM4761777	c.950G>A	p.S317N	Substitution - Missense	Stomach
COSM5723996	c.640C>T	p.P214S	Substitution - Missense	Skin
COSM3655416	c.144G>A	p.K48K	Substitution - coding silent	Breast
COSM3214133	c.638_639insT	p.A216fs*47	Insertion - Frameshift	Large_intestine
COSM5092671	c.71_72insC	p.E25fs*51	Insertion - Frameshift	Large_intestine
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Large_intestine
COSM4371948	c.1225G>A	p.E409K	Substitution - Missense	Oesophagus
COSM3214136	c.516G>A	p.A172A	Substitution - coding silent	Large_intestine
COSM5620362	c.1966T>G	p.S656A	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM3905431	c.794C>T	p.P265L	Substitution - Missense	Stomach
COSM4666095	c.564delC	p.T189fs*54	Deletion - Frameshift	Large_intestine
COSM1106554	c.981C>T	p.H327H	Substitution - coding silent	Endometrium
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Stomach
COSM21281	c.651C>G	p.A217A	Substitution - coding silent	Stomach
COSM5766088	c.1880G>A	p.R627Q	Substitution - Missense	Large_intestine
COSM5030527	c.1907G>C	p.C636S	Substitution - Missense	Bone
COSM5983732	c.2176G>C	p.E726Q	Substitution - Missense	Upper_aerodigestive_tract
COSM4007092	c.1696G>T	p.E566*	Substitution - Nonsense	Urinary_tract
COSM5989521	c.1086+2T>G	p.?	Unknown	Haematopoietic_and_lymphoid_tissue
COSM4666089	c.1474_1476delAAG	p.K492delK	Deletion - In frame	Large_intestine
COSM1674941	c.1826C>T	p.S609F	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM1756033	c.1186G>A	p.E396K	Substitution - Missense	Urinary_tract
COSM4785701	c.38C>T	p.P13L	Substitution - Missense	Large_intestine
COSM5463769	c.835C>T	p.R279W	Substitution - Missense	Large_intestine
COSM5410669	c.1492G>A	p.E498K	Substitution - Missense	Skin
COSM1674942	c.833G>A	p.R278Q	Substitution - Missense	Large_intestine
COSM1674940	c.1984C>T	p.Q662*	Substitution - Nonsense	Skin
COSM3664209	c.599C>T	p.P200L	Substitution - Missense	Liver
COSM3982765	c.723C>T	p.G241G	Substitution - coding silent	Haematopoietic_and_lymphoid_tissue
COSM3905428	c.888C>T	p.G296G	Substitution - coding silent	Stomach
COSM1106533	c.1885C>T	p.L629L	Substitution - coding silent	Endometrium
COSM5660677	c.964A>T	p.M322L	Substitution - Missense	Soft_tissue
COSM4615045	c.719delA	p.K240fs*3	Deletion - Frameshift	Large_intestine
COSM1674943	c.276T>G	p.N92K	Substitution - Missense	Large_intestine
COSM3745884	c.1020C>T	p.A340A	Substitution - coding silent	Liver
COSM4628845	c.908G>A	p.G303D	Substitution - Missense	Large_intestine
COSM4810868	c.315C>T	p.F105F	Substitution - coding silent	Urinary_tract
COSM21134	c.107C>A	p.T36N	Substitution - Missense	Kidney
COSM1106535	c.1843G>T	p.E615*	Substitution - Nonsense	Endometrium
COSM3905417	c.1675G>A	p.A559T	Substitution - Missense	Stomach
COSM1723480	c.1154C>T	p.S385L	Substitution - Missense	Skin
COSM20589	c.1936+1G>A	p.?	Unknown	Stomach
COSM5977124	c.779G>A	p.R260Q	Substitution - Missense	Upper_aerodigestive_tract
COSM3905426	c.991G>A	p.A331T	Substitution - Missense	Stomach
COSM21134	c.107C>A	p.T36N	Substitution - Missense	Kidney
COSM5910637	c.173C>T	p.P58L	Substitution - Missense	Skin
COSM1106543	c.1417G>A	p.V473M	Substitution - Missense	Endometrium
COSM3655410	c.971C>T	p.S324F	Substitution - Missense	Skin
COSM3847992	c.1525G>C	p.E509Q	Substitution - Missense	Breast
COSM3905424	c.1180G>T	p.D394Y	Substitution - Missense	Stomach
COSM5589840	c.36C>T	p.I12I	Substitution - coding silent	Skin
COSM5092671	c.71_72insC	p.E25fs*51	Insertion - Frameshift	Large_intestine
COSM4639267	c.50G>A	p.G17D	Substitution - Missense	Large_intestine
COSM3763733	c.1284C>T	p.P428P	Substitution - coding silent	Haematopoietic_and_lymphoid_tissue
COSM4666093	c.698C>T	p.T233M	Substitution - Missense	Soft_tissue
COSM4560358	c.840G>A	p.E280E	Substitution - coding silent	Skin
COSM1132559	c.2029G>A	p.G677R	Substitution - Missense	Stomach
COSM3432965	c.946G>A	p.D316N	Substitution - Missense	Large_intestine
COSM3655409	c.1827C>T	p.S609S	Substitution - coding silent	Skin
COSM5461076	c.850C>T	p.R284C	Substitution - Missense	Large_intestine
COSM4626380	c.630G>A	p.S210S	Substitution - coding silent	Large_intestine
COSM4426157	c.1141C>T	p.R381W	Substitution - Missense	Oesophagus
COSM4007094	c.198C>G	p.I66M	Substitution - Missense	Urinary_tract
COSM5410673	c.37C>T	p.P13S	Substitution - Missense	Skin
COSM1106560	c.523T>C	p.S175P	Substitution - Missense	Endometrium
COSM3926394	c.719A>G	p.K240R	Substitution - Missense	Skin
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Large_intestine
COSM20589	c.1936+1G>A	p.?	Unknown	Stomach
COSM5419497	c.405A>G	p.Q135Q	Substitution - coding silent	Haematopoietic_and_lymphoid_tissue
COSM1106548	c.1117G>A	p.A373T	Substitution - Missense	Central_nervous_system
COSM4786618	c.206A>G	p.N69S	Substitution - Missense	Large_intestine
COSM5004875	c.945C>T	p.C315C	Substitution - coding silent	Haematopoietic_and_lymphoid_tissue
COSM1674942	c.833G>A	p.R278Q	Substitution - Missense	Large_intestine
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Stomach
COSM1106548	c.1117G>A	p.A373T	Substitution - Missense	Large_intestine
COSM3655407	c.2059C>T	p.R687W	Substitution - Missense	Skin
COSM4466766	c.1451C>A	p.P484Q	Substitution - Missense	Skin
COSM21287	c.481G>A	p.A161T	Substitution - Missense	Stomach
COSM1106547	c.1122G>T	p.Q374H	Substitution - Missense	Endometrium
COSM1674942	c.833G>A	p.R278Q	Substitution - Missense	Large_intestine
COSM20589	c.1936+1G>A	p.?	Unknown	Stomach
COSM5606356	c.220C>T	p.H74Y	Substitution - Missense	Skin
COSM3905419	c.1310C>T	p.A437V	Substitution - Missense	Stomach
COSM3214124	c.851G>A	p.R284H	Substitution - Missense	Stomach
COSM3655412	c.855C>T	p.P285P	Substitution - coding silent	Skin
COSM3214110	c.1785A>T	p.V595V	Substitution - coding silent	Oesophagus
COSM4784007	c.458A>G	p.K153R	Substitution - Missense	Large_intestine
COSM4501900	c.5C>T	p.S2F	Substitution - Missense	Skin
COSM1106548	c.1117G>A	p.A373T	Substitution - Missense	Endometrium
COSM3763733	c.1284C>T	p.P428P	Substitution - coding silent	Large_intestine
COSM1674941	c.1826C>T	p.S609F	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM5461076	c.850C>T	p.R284C	Substitution - Missense	Prostate
COSM5606356	c.220C>T	p.H74Y	Substitution - Missense	Skin
COSM4530417	c.1699G>A	p.E567K	Substitution - Missense	Skin
COSM3905431	c.794C>T	p.P265L	Substitution - Missense	Upper_aerodigestive_tract
COSM3905428	c.888C>T	p.G296G	Substitution - coding silent	Haematopoietic_and_lymphoid_tissue
COSM5040578	c.1093A>T	p.M365L	Substitution - Missense	Liver
COSM1106541	c.1659C>T	p.G553G	Substitution - coding silent	Stomach
COSM5723996	c.640C>T	p.P214S	Substitution - Missense	Skin
COSM4861916	c.277A>T	p.N93Y	Substitution - Missense	Lung
COSM3214117	c.1287G>A	p.A429A	Substitution - coding silent	Stomach
COSM4814037	c.68C>T	p.P23L	Substitution - Missense	Breast
COSM4395087	c.417G>A	p.Q139Q	Substitution - coding silent	Skin
COSM3214106	c.2025C>T	p.V675V	Substitution - coding silent	Oesophagus
COSM142957	c.1831_1832CC>TT	p.P611F	Substitution - Missense	Skin
COSM1132559	c.2029G>A	p.G677R	Substitution - Missense	Prostate
COSM4163509	c.702G>A	p.P234P	Substitution - coding silent	Haematopoietic_and_lymphoid_tissue
COSM4948636	c.1102C>T	p.R368*	Substitution - Nonsense	Large_intestine
COSM1674943	c.276T>G	p.N92K	Substitution - Missense	Large_intestine
COSM3214133	c.638_639insT	p.A216fs*47	Insertion - Frameshift	Large_intestine
COSM4666093	c.698C>T	p.T233M	Substitution - Missense	Large_intestine
COSM1106539	c.1764C>T	p.P588P	Substitution - coding silent	Endometrium
COSM3413433	c.721G>A	p.G241S	Substitution - Missense	Central_nervous_system
COSM4855262	c.1713C>A	p.P571P	Substitution - coding silent	Cervix
COSM5461076	c.850C>T	p.R284C	Substitution - Missense	Prostate
COSM3730368	c.703C>A	p.P235T	Substitution - Missense	Stomach
COSM5410671	c.1143G>A	p.R381R	Substitution - coding silent	Skin
COSM1723480	c.1154C>T	p.S385L	Substitution - Missense	Skin
COSM1106537	c.1781G>A	p.R594Q	Substitution - Missense	Endometrium
COSM5486726	c.1780C>T	p.R594W	Substitution - Missense	Large_intestine
COSM3905418	c.1662C>T	p.G554G	Substitution - coding silent	Stomach
COSM1674942	c.833G>A	p.R278Q	Substitution - Missense	Large_intestine
COSM4626377	c.849C>G	p.G283G	Substitution - coding silent	Large_intestine
COSM4666091	c.899A>C	p.Q300P	Substitution - Missense	Large_intestine
COSM4476764	c.2095C>T	p.P699S	Substitution - Missense	Skin
COSM3655408	c.1960G>A	p.A654T	Substitution - Missense	Skin
COSM5606356	c.220C>T	p.H74Y	Substitution - Missense	Skin
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Large_intestine
COSM5418427	c.322A>T	p.M108L	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Large_intestine
COSM1756033	c.1186G>A	p.E396K	Substitution - Missense	Urinary_tract
COSM3996422	c.511G>C	p.V171L	Substitution - Missense	Kidney
COSM1106564	c.482C>T	p.A161V	Substitution - Missense	Endometrium
COSM3214149	c.101G>A	p.R34H	Substitution - Missense	Stomach
COSM4785701	c.38C>T	p.P13L	Substitution - Missense	Large_intestine
COSM3395653	c.1416C>T	p.A472A	Substitution - coding silent	Pancreas
COSM3952460	c.265A>G	p.R89G	Substitution - Missense	Lung
COSM21287	c.481G>A	p.A161T	Substitution - Missense	Stomach
COSM3905433	c.338A>G	p.Y113C	Substitution - Missense	Stomach
COSM3214123	c.895C>T	p.P299S	Substitution - Missense	Large_intestine
COSM3655414	c.241A>G	p.M81V	Substitution - Missense	Skin
COSM4163509	c.702G>A	p.P234P	Substitution - coding silent	Thyroid
COSM3664209	c.599C>T	p.P200L	Substitution - Missense	Liver
COSM3214123	c.895C>T	p.P299S	Substitution - Missense	Large_intestine
COSM5763954	c.2161G>A	p.D721N	Substitution - Missense	Large_intestine
COSM21281	c.651C>G	p.A217A	Substitution - coding silent	Stomach
COSM3214123	c.895C>T	p.P299S	Substitution - Missense	Large_intestine
COSM4404585	c.972C>T	p.S324S	Substitution - coding silent	Skin
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Large_intestine
COSM21288	c.71delC	p.P24fs*24	Deletion - Frameshift	Stomach
COSM1106552	c.1008G>A	p.K336K	Substitution - coding silent	Endometrium
COSM1106545	c.1272G>A	p.A424A	Substitution - coding silent	Endometrium
COSM5663535	c.2019G>A	p.Q673Q	Substitution - coding silent	Soft_tissue

> Text Mining based Variations

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PMID	Variation	Cancer	Evidence
26001144	mutation	Primary Pulmonary NUT Midline Carcinoma	Eight cases had a fluorescence in situ hybridization-proven BRD4-NUT or BRD3-NUT rearrangement; one case was presumed to have a NUT-variant fusion event.
23463074	mutation	NUT Midline Carcinoma	The rearrangements most often take the form of BRD4-NUT fusions, and in a minority of cases, BRD3-NUT or NUT-variant fusions.
22017582	mutation	NUT Midline Carcinoma	NUT midline carcinoma (NMC), an aggressive form of squamous cell carcinoma, is defined by the presence of acquired chromosomal rearrangements involving NUT, usually BRD4-NUT fusion genes and, less commonly, NUT-variant fusion genes involving BRD3 or still-uncharacterized genes.
20951314	mutation	NUT Midline Carcinoma	In the remaining cases, NUT is fused to BRD3 or an unknown partner gene; these tumors are termed NUT-variant.
20017639	mutation	NUT Midline Carcinoma	In two thirds of cases, NUT is involved in a balanced translocation with BDR4 on chromosome 19, while in the remaining cases, NUT is rearranged with variant fusion partners such as BRD3.
18552174	mutation	NUT Midline Carcinoma	Variant rearrangements, some involving the BRD3 gene, occur in the remaining cases.
17934517	mutation	NUT Midline Carcinoma	Using a candidate gene approach, we identified two NMCs harboring novel rearrangements that result in the fusion of NUT to BRD3 on chromosome 9.
16008511	mutation	Bladder Carcinoma	A study of human BRD3, located on chromosome 9 at q34, a region susceptible to genomic rearrangement, showed an altered expression in 4 of 12 patients with bladder cancer, compared with adjacent noncancerous tissues.
25466466	mutation	Pulmonary NUT Midline Carcinoma	In more than two-thirds of NMC cases, a gene fusion between NUT and BRD4 or BRD3 has been documented; other fusions are rare.

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Post-translational modification (PTM)

> Post-translational modification (PTM)

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Filter By:

Uniprot ID	Position	Amino Acid	Description	Upstream Enzyme	Affected By Mutation	Amino Acid Sequence Variant
Q15059	263	S	Phosphoserine	-	No	None detected
Q15059	281	S	Phosphoserine	-	No	None detected
Q15059	563	S	Phosphoserine	-	No	None detected

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Expression analysis in primary tumor tissue from TCGA > Expression level in cancer cell line from CCLE > Expression level in human normal tissue from HPA > Text mining based expression change

> The Cancer Genome Atlas (TCGA)

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Differential expression analysis for cancers with more than 10 normal samples

Cancer	Full Name	# N	# T	Median (N)	Median (T)	LogFC	Adj. P	Status
BLCA	Bladder urothelial carcinoma	19	408	5.699	5.324	-0.162	0.371	NS
BRCA	Breast invasive carcinoma	112	1100	5.719	5.988	0.269	5.21e-06	NS
CESC	Cervical and endocervical cancers	3	306	5.88	5.596	NA	NA	NA
COAD	Colon adenocarcinoma	41	459	5.365	5.63	0.211	0.00841	NS
ESCA	Esophageal carcinoma	11	185	5.399	5.759	0.256	0.237	NS
GBM	Glioblastoma multiforme	5	166	5.942	5.632	NA	NA	NA
HNSC	Head and Neck squamous cell carcinoma	44	522	5.179	5.362	0.252	0.0183	NS
KIRC	Kidney renal clear cell carcinoma	72	534	5.396	4.956	-0.391	2.77e-10	NS
KIRP	Kidney renal papillary cell carcinoma	32	291	5.438	5.474	0.065	0.601	NS
LAML	Acute Myeloid Leukemia	0	173	NA	6.604	NA	NA	NA
LGG	Brain Lower Grade Glioma	0	530	NA	6.503	NA	NA	NA
LIHC	Liver hepatocellular carcinoma	50	373	4.247	4.43	0.206	0.0851	NS
LUAD	Lung adenocarcinoma	59	517	5.532	5.458	-0.101	0.219	NS
LUSC	Lung squamous cell carcinoma	51	501	5.428	5.455	0.076	0.442	NS
OV	Ovarian serous cystadenocarcinoma	0	307	NA	6.064	NA	NA	NA
PAAD	Pancreatic adenocarcinoma	4	179	5.7	5.57	NA	NA	NA
PCPG	Pheochromocytoma and Paraganglioma	3	184	5.401	5.528	NA	NA	NA
PRAD	Prostate adenocarcinoma	52	498	6.011	6.205	0.235	0.00335	NS
READ	Rectum adenocarcinoma	10	167	5.424	5.647	0.24	0.206	NS
SARC	Sarcoma	2	263	4.894	5.66	NA	NA	NA
SKCM	Skin Cutaneous Melanoma	1	472	4.943	5.129	NA	NA	NA
STAD	Stomach adenocarcinoma	35	415	5.502	5.819	0.303	0.00221	NS
TGCT	Testicular Germ Cell Tumors	0	156	NA	5.97	NA	NA	NA
THCA	Thyroid carcinoma	59	509	5.809	5.545	-0.199	0.0017	NS
THYM	Thymoma	2	120	6.366	5.94	NA	NA	NA
UCEC	Uterine Corpus Endometrial Carcinoma	35	546	6.099	5.742	-0.32	0.00237	NS

> Cancer Cell Line Encyclopedia (CCLE)

[ TOP ]

Tissue	Cell Line	Expression Level (Microarray)
Autonomic ganglia	CHP126	10.5
Autonomic ganglia	CHP212	10.1
Autonomic ganglia	IMR32	10.3
Autonomic ganglia	KELLY	9.5
Autonomic ganglia	KPNRTBM1	10.5
Autonomic ganglia	KPNSI9S	8.9
Autonomic ganglia	KPNYN	10.5
Autonomic ganglia	MHHNB11	10.1
Autonomic ganglia	NB1	10.6
Autonomic ganglia	NH6	10.2
Autonomic ganglia	SHSY5Y	10.3
Autonomic ganglia	SIMA	11.1
Autonomic ganglia	SKNAS	9.5
Autonomic ganglia	SKNBE2	10.5
Autonomic ganglia	SKNDZ	10.2
Autonomic ganglia	SKNFI	10
Autonomic ganglia	SKNSH	9.2
Biliary tract	HUCCT1	8.2
Biliary tract	HUH28	8.9
Biliary tract	SNU1079	8.9
Biliary tract	SNU1196	9.7
Biliary tract	SNU245	9
Biliary tract	SNU308	8.7
Biliary tract	SNU478	8.9
Bone	143B	8.9
Bone	A673	9.8
Bone	CADOES1	9.9
Bone	CAL78	9
Bone	G292CLONEA141B1	8.9
Bone	HOS	9.3
Bone	HS706T	8.6
Bone	HS737T	8.8
Bone	HS819T	8.9
Bone	HS821T	8.8
Bone	HS822T	8.6
Bone	HS863T	8.8
Bone	HS870T	8.4
Bone	HS888T	8.7
Bone	MG63	8.9
Bone	MHHES1	10.4
Bone	OUMS27	8.9
Bone	RDES	10.2
Bone	SJSA1	8.6
Bone	SKES1	10.4
Bone	SKNMC	9.9
Bone	SW1353	8.7
Bone	T173	8.5
Bone	TC71	9.1
Bone	U2OS	9.1
Breast	AU565	8.4
Breast	BT20	9.7
Breast	BT474	10
Breast	BT483	10.5
Breast	BT549	9.5
Breast	CAL120	9.1
Breast	CAL148	11.1
Breast	CAL51	9.9
Breast	CAL851	8.3
Breast	CAMA1	9.3
Breast	DU4475	9.4
Breast	EFM192A	9.8
Breast	EFM19	10.4
Breast	EVSAT	8.9
Breast	HCC1143	9
Breast	HCC1187	10.3
Breast	HCC1395	9.4
Breast	HCC1419	10.5
Breast	HCC1428	9.3
Breast	HCC1500	9.5
Breast	HCC1569	8.7
Breast	HCC1599	10.1
Breast	HCC1806	9
Breast	HCC1937	9.2
Breast	HCC1954	8.9
Breast	HCC202	9.5
Breast	HCC2157	9.3
Breast	HCC2218	9.3
Breast	HCC38	8.9
Breast	HCC70	8.7
Breast	HDQP1	8.5
Breast	HMC18	8.9
Breast	HS274T	8.9
Breast	HS281T	8
Breast	HS343T	8.6
Breast	HS578T	8.3
Breast	HS606T	8.6
Breast	HS739T	8.6
Breast	HS742T	8.4
Breast	JIMT1	9.2
Breast	KPL1	9.7
Breast	MCF7	8.8
Breast	MDAMB134VI	9.2
Breast	MDAMB157	8.5
Breast	MDAMB175VII	9.3
Breast	MDAMB231	8.8
Breast	MDAMB361	9.6
Breast	MDAMB415	7.9
Breast	MDAMB436	9.8
Breast	MDAMB453	9.5
Breast	MDAMB468	8.9
Breast	SKBR3	8.9
Breast	T47D	9
Breast	UACC812	9.4
Breast	UACC893	10.4
Breast	YMB1	9
Breast	ZR751	8.8
Breast	ZR7530	9.5
Central nervous system	1321N1	9.1
Central nervous system	42MGBA	8.6
Central nervous system	8MGBA	8.6
Central nervous system	A172	9.3
Central nervous system	AM38	8.6
Central nervous system	BECKER	9.3
Central nervous system	CAS1	9.1
Central nervous system	CCFSTTG1	8.5
Central nervous system	D283MED	10
Central nervous system	D341MED	9.9
Central nervous system	DAOY	9.6
Central nervous system	DBTRG05MG	9.3
Central nervous system	DKMG	9
Central nervous system	GAMG	8.4
Central nervous system	GB1	8.8
Central nervous system	GI1	9.3
Central nervous system	GMS10	9.2
Central nervous system	GOS3	10
Central nervous system	H4	9.3
Central nervous system	HS683	8.4
Central nervous system	KALS1	9.2
Central nervous system	KG1C	9
Central nervous system	KNS42	9.5
Central nervous system	KNS60	8.5
Central nervous system	KNS81	8.7
Central nervous system	KS1	8.5
Central nervous system	LN18	8.6
Central nervous system	LN229	8.4
Central nervous system	M059K	8.4
Central nervous system	MOGGCCM	9.6
Central nervous system	MOGGUVW	8.8
Central nervous system	NMCG1	8.7
Central nervous system	ONS76	8.9
Central nervous system	SF126	8.6
Central nervous system	SF295	8.6
Central nervous system	SNB19	8.3
Central nervous system	SNU1105	8.7
Central nervous system	SNU201	9.6
Central nervous system	SNU466	8.9
Central nervous system	SNU489	10.1
Central nervous system	SNU626	9.2
Central nervous system	SNU738	9
Central nervous system	SW1088	8.8
Central nervous system	SW1783	8.5
Central nervous system	T98G	9.2
Central nervous system	TM31	9.6
Central nervous system	U118MG	8.8
Central nervous system	U138MG	9.2
Central nervous system	U251MG	9.6
Central nervous system	U87MG	8.5
Central nervous system	YH13	9.3
Central nervous system	YKG1	9.2
Endometrium	AN3CA	9.5
Endometrium	COLO684	10.3
Endometrium	EFE184	9.4
Endometrium	EN	9.5
Endometrium	ESS1	8.9
Endometrium	HEC108	9.1
Endometrium	HEC151	7.8
Endometrium	HEC1A	9
Endometrium	HEC1B	9
Endometrium	HEC251	7.9
Endometrium	HEC265	8.5
Endometrium	HEC50B	8.6
Endometrium	HEC59	8.4
Endometrium	HEC6	8.3
Endometrium	ISHIKAWAHERAKLIO02ER	8.8
Endometrium	JHUEM1	9.3
Endometrium	JHUEM2	9.6
Endometrium	JHUEM3	9.6
Endometrium	KLE	8.7
Endometrium	MFE280	9.9
Endometrium	MFE296	9.2
Endometrium	MFE319	8.7
Endometrium	RL952	9.6
Endometrium	SNGM	9.8
Endometrium	SNU1077	9.4
Endometrium	SNU685	9.3
Endometrium	TEN	9
Haematopoietic and lymphoid	697	10.2
Haematopoietic and lymphoid	A3KAW	5
Haematopoietic and lymphoid	A4FUK	6
Haematopoietic and lymphoid	ALLSIL	10.4
Haematopoietic and lymphoid	AML193	9.6
Haematopoietic and lymphoid	AMO1	8.5
Haematopoietic and lymphoid	BCP1	5.2
Haematopoietic and lymphoid	BDCM	8.7
Haematopoietic and lymphoid	BL41	6.7
Haematopoietic and lymphoid	BL70	6.7
Haematopoietic and lymphoid	BV173	10
Haematopoietic and lymphoid	CA46	8.8
Haematopoietic and lymphoid	CI1	8.4
Haematopoietic and lymphoid	CMK115	9.3
Haematopoietic and lymphoid	CMK86	10
Haematopoietic and lymphoid	CMK	9.7
Haematopoietic and lymphoid	CMLT1	10.8
Haematopoietic and lymphoid	COLO775	9.1
Haematopoietic and lymphoid	DAUDI	6.6
Haematopoietic and lymphoid	DB	7.9
Haematopoietic and lymphoid	DEL	8.8
Haematopoietic and lymphoid	DND41	10.4
Haematopoietic and lymphoid	DOHH2	9.6
Haematopoietic and lymphoid	EB1	8.6
Haematopoietic and lymphoid	EB2	8.5
Haematopoietic and lymphoid	EHEB	8.4
Haematopoietic and lymphoid	EJM	8.2
Haematopoietic and lymphoid	EM2	9.7
Haematopoietic and lymphoid	EOL1	10.3
Haematopoietic and lymphoid	F36P	9.9
Haematopoietic and lymphoid	GA10	7.4
Haematopoietic and lymphoid	GDM1	9.5
Haematopoietic and lymphoid	GRANTA519	9.4
Haematopoietic and lymphoid	HDLM2	9.1
Haematopoietic and lymphoid	HDMYZ	8.5
Haematopoietic and lymphoid	HEL9217	9.1
Haematopoietic and lymphoid	HEL	9.3
Haematopoietic and lymphoid	HH	9.6
Haematopoietic and lymphoid	HL60	10.3
Haematopoietic and lymphoid	HPBALL	10.7
Haematopoietic and lymphoid	HS604T	9.2
Haematopoietic and lymphoid	HS611T	7.9
Haematopoietic and lymphoid	HS616T	8.8
Haematopoietic and lymphoid	HS751T	8.9
Haematopoietic and lymphoid	HT	8.5
Haematopoietic and lymphoid	HTK	9.1
Haematopoietic and lymphoid	HUNS1	8.5
Haematopoietic and lymphoid	HUT102	8
Haematopoietic and lymphoid	HUT78	9.2
Haematopoietic and lymphoid	JEKO1	10.4
Haematopoietic and lymphoid	JK1	10.1
Haematopoietic and lymphoid	JM1	9
Haematopoietic and lymphoid	JURKAT	10.4
Haematopoietic and lymphoid	JURLMK1	10.2
Haematopoietic and lymphoid	JVM2	8.7
Haematopoietic and lymphoid	JVM3	9
Haematopoietic and lymphoid	K562	9.3
Haematopoietic and lymphoid	KARPAS299	9.4
Haematopoietic and lymphoid	KARPAS422	8.4
Haematopoietic and lymphoid	KARPAS620	7.4
Haematopoietic and lymphoid	KASUMI1	9.9
Haematopoietic and lymphoid	KASUMI2	10
Haematopoietic and lymphoid	KASUMI6	9.9
Haematopoietic and lymphoid	KCL22	10.1
Haematopoietic and lymphoid	KE37	10.2
Haematopoietic and lymphoid	KE97	8.5
Haematopoietic and lymphoid	KG1	9.7
Haematopoietic and lymphoid	KHM1B	7.6
Haematopoietic and lymphoid	KIJK	7.2
Haematopoietic and lymphoid	KMH2	9.9
Haematopoietic and lymphoid	KMM1	8.8
Haematopoietic and lymphoid	KMS11	8.7
Haematopoietic and lymphoid	KMS12BM	6.7
Haematopoietic and lymphoid	KMS18	8.9
Haematopoietic and lymphoid	KMS20	8.4
Haematopoietic and lymphoid	KMS21BM	7.3
Haematopoietic and lymphoid	KMS26	8.3
Haematopoietic and lymphoid	KMS27	7.9
Haematopoietic and lymphoid	KMS28BM	8.4
Haematopoietic and lymphoid	KMS34	5.4
Haematopoietic and lymphoid	KO52	9.9
Haematopoietic and lymphoid	KOPN8	10.4
Haematopoietic and lymphoid	KU812	9.3
Haematopoietic and lymphoid	KYO1	9.5
Haematopoietic and lymphoid	L1236	9.2
Haematopoietic and lymphoid	L363	9
Haematopoietic and lymphoid	L428	8.5
Haematopoietic and lymphoid	L540	9
Haematopoietic and lymphoid	LAMA84	10.3
Haematopoietic and lymphoid	LOUCY	10.2
Haematopoietic and lymphoid	LP1	7.5
Haematopoietic and lymphoid	M07E	10.3
Haematopoietic and lymphoid	MC116	8.4
Haematopoietic and lymphoid	ME1	9.3
Haematopoietic and lymphoid	MEC1	9.6
Haematopoietic and lymphoid	MEC2	8.8
Haematopoietic and lymphoid	MEG01	9.6
Haematopoietic and lymphoid	MHHCALL2	9.7
Haematopoietic and lymphoid	MHHCALL3	10.7
Haematopoietic and lymphoid	MHHCALL4	10.2
Haematopoietic and lymphoid	MINO	8.9
Haematopoietic and lymphoid	MJ	8.7
Haematopoietic and lymphoid	MM1S	7.2
Haematopoietic and lymphoid	MOLM13	10
Haematopoietic and lymphoid	MOLM16	9.8
Haematopoietic and lymphoid	MOLM6	10.6
Haematopoietic and lymphoid	MOLP2	8.3
Haematopoietic and lymphoid	MOLP8	8.1
Haematopoietic and lymphoid	MOLT13	10.3
Haematopoietic and lymphoid	MOLT16	10.1
Haematopoietic and lymphoid	MOLT4	9.7
Haematopoietic and lymphoid	MONOMAC1	9.9
Haematopoietic and lymphoid	MONOMAC6	9.6
Haematopoietic and lymphoid	MOTN1	9.3
Haematopoietic and lymphoid	MUTZ5	10.3
Haematopoietic and lymphoid	MV411	10.6
Haematopoietic and lymphoid	NALM19	10.1
Haematopoietic and lymphoid	NALM1	10.4
Haematopoietic and lymphoid	NALM6	9.4
Haematopoietic and lymphoid	NAMALWA	9.7
Haematopoietic and lymphoid	NB4	10
Haematopoietic and lymphoid	NCIH929	7.2
Haematopoietic and lymphoid	NCO2	10.8
Haematopoietic and lymphoid	NOMO1	9.4
Haematopoietic and lymphoid	NUDHL1	9.4
Haematopoietic and lymphoid	NUDUL1	9.8
Haematopoietic and lymphoid	OCIAML2	10.1
Haematopoietic and lymphoid	OCIAML3	10.1
Haematopoietic and lymphoid	OCIAML5	10.1
Haematopoietic and lymphoid	OCILY10	8.9
Haematopoietic and lymphoid	OCILY19	10.3
Haematopoietic and lymphoid	OCILY3	8.4
Haematopoietic and lymphoid	OCIM1	9.2
Haematopoietic and lymphoid	OPM2	8.5
Haematopoietic and lymphoid	P12ICHIKAWA	9.9
Haematopoietic and lymphoid	P31FUJ	9.2
Haematopoietic and lymphoid	P3HR1	8.3
Haematopoietic and lymphoid	PCM6	7.2
Haematopoietic and lymphoid	PEER	8.8
Haematopoietic and lymphoid	PF382	10.5
Haematopoietic and lymphoid	PFEIFFER	8
Haematopoietic and lymphoid	PL21	9.8
Haematopoietic and lymphoid	RAJI	8
Haematopoietic and lymphoid	RCHACV	10.2
Haematopoietic and lymphoid	REC1	9.2
Haematopoietic and lymphoid	REH	9.5
Haematopoietic and lymphoid	RI1	9.2
Haematopoietic and lymphoid	RL	7.5
Haematopoietic and lymphoid	RPMI8226	8.8
Haematopoietic and lymphoid	RPMI8402	10.3
Haematopoietic and lymphoid	RS411	9.4
Haematopoietic and lymphoid	SEM	9.3
Haematopoietic and lymphoid	SET2	9.7
Haematopoietic and lymphoid	SIGM5	9.5
Haematopoietic and lymphoid	SKM1	9.9
Haematopoietic and lymphoid	SKMM2	8.5
Haematopoietic and lymphoid	SR786	7.4
Haematopoietic and lymphoid	ST486	8.4
Haematopoietic and lymphoid	SUDHL10	7.9
Haematopoietic and lymphoid	SUDHL1	9.1
Haematopoietic and lymphoid	SUDHL4	8.2
Haematopoietic and lymphoid	SUDHL5	9
Haematopoietic and lymphoid	SUDHL6	7.4
Haematopoietic and lymphoid	SUDHL8	9.8
Haematopoietic and lymphoid	SUPB15	9.5
Haematopoietic and lymphoid	SUPHD1	9.4
Haematopoietic and lymphoid	SUPM2	8.2
Haematopoietic and lymphoid	SUPT11	10
Haematopoietic and lymphoid	SUPT1	9.3
Haematopoietic and lymphoid	TALL1	10.1
Haematopoietic and lymphoid	TF1	9.5
Haematopoietic and lymphoid	THP1	9.9
Haematopoietic and lymphoid	TO175T	8.8
Haematopoietic and lymphoid	TOLEDO	8.7
Haematopoietic and lymphoid	U266B1	6.8
Haematopoietic and lymphoid	U937	9.3
Haematopoietic and lymphoid	UT7	10
Haematopoietic and lymphoid	WSUDLCL2	8.4
Kidney	769P	8.8
Kidney	786O	8.9
Kidney	A498	9.2
Kidney	A704	7.6
Kidney	ACHN	8.7
Kidney	BFTC909	9.3
Kidney	CAKI1	8.6
Kidney	CAKI2	8.5
Kidney	CAL54	10.1
Kidney	KMRC1	7.7
Kidney	KMRC20	8.6
Kidney	KMRC2	8.8
Kidney	KMRC3	9
Kidney	OSRC2	8.1
Kidney	RCC10RGB	8.4
Kidney	SNU1272	8.9
Kidney	SNU349	8.3
Kidney	TUHR10TKB	9
Kidney	TUHR14TKB	9.2
Kidney	TUHR4TKB	8.7
Kidney	VMRCRCW	9.1
Kidney	VMRCRCZ	8.2
Large intestine	C2BBE1	9.1
Large intestine	CCK81	8.9
Large intestine	CL11	8.7
Large intestine	CL14	9.6
Large intestine	CL34	9
Large intestine	CL40	9
Large intestine	COLO205	9.1
Large intestine	COLO320	10.1
Large intestine	COLO678	9.7
Large intestine	CW2	9.1
Large intestine	DLD1	8.7
Large intestine	GP2D	8.3
Large intestine	HCC56	9.5
Large intestine	HCT116	8.5
Large intestine	HCT15	9.1
Large intestine	HS675T	8.4
Large intestine	HS698T	9.2
Large intestine	HT115	9.3
Large intestine	HT29	9.7
Large intestine	HT55	9.8
Large intestine	KM12	8.6
Large intestine	LOVO	8.5
Large intestine	LS1034	9.3
Large intestine	LS123	9.9
Large intestine	LS180	9.1
Large intestine	LS411N	8.7
Large intestine	LS513	9.5
Large intestine	MDST8	9.1
Large intestine	NCIH508	9.1
Large intestine	NCIH716	8.5
Large intestine	NCIH747	8.7
Large intestine	OUMS23	9.6
Large intestine	RCM1	8.8
Large intestine	RKO	8.5
Large intestine	SKCO1	9.4
Large intestine	SNU1040	9.3
Large intestine	SNU1197	8.4
Large intestine	SNU175	9.3
Large intestine	SNU283	9.3
Large intestine	SNU407	9.6
Large intestine	SNU503	9.2
Large intestine	SNU61	9.3
Large intestine	SNU81	9.6
Large intestine	SNUC1	8.5
Large intestine	SNUC2A	9
Large intestine	SNUC4	9.2
Large intestine	SNUC5	8.5
Large intestine	SW1116	9.5
Large intestine	SW1417	8.9
Large intestine	SW1463	9
Large intestine	SW403	9.3
Large intestine	SW480	7.9
Large intestine	SW48	9.1
Large intestine	SW620	9.1
Large intestine	SW837	9.2
Large intestine	SW948	9.7
Large intestine	T84	9.4
Liver	ALEXANDERCELLS	8.4
Liver	C3A	9.1
Liver	HEP3B217	9.5
Liver	HEPG2	9.8
Liver	HLE	8
Liver	HLF	8.3
Liver	HUH1	8.8
Liver	HUH6	9.4
Liver	HUH7	9.8
Liver	JHH1	9.5
Liver	JHH2	8.5
Liver	JHH4	9
Liver	JHH5	9.3
Liver	JHH6	9.8
Liver	JHH7	9.3
Liver	LI7	9.4
Liver	PLCPRF5	8.4
Liver	SKHEP1	8
Liver	SNU182	9.9
Liver	SNU387	8.4
Liver	SNU398	9
Liver	SNU423	9.2
Liver	SNU449	9.7
Liver	SNU475	9
Liver	SNU761	9.5
Liver	SNU878	7.8
Liver	SNU886	8.7
Lung	A549	8.7
Lung	ABC1	8.9
Lung	BEN	8.8
Lung	CAL12T	8.8
Lung	CALU1	9
Lung	CALU3	8.6
Lung	CALU6	9.6
Lung	CHAGOK1	9.1
Lung	COLO668	9.6
Lung	COLO699	9.3
Lung	CORL105	9
Lung	CORL23	9.2
Lung	CORL24	9.2
Lung	CORL279	10.2
Lung	CORL311	9.8
Lung	CORL47	10.6
Lung	CORL51	10.4
Lung	CORL88	11
Lung	CORL95	10.4
Lung	CPCN	9.6
Lung	DMS114	8.8
Lung	DMS153	9.8
Lung	DMS273	9.7
Lung	DMS454	9.4
Lung	DMS53	8.5
Lung	DMS79	9.9
Lung	DV90	8.6
Lung	EBC1	8.1
Lung	EPLC272H	8.4
Lung	HARA	8.4
Lung	HCC1171	8.9
Lung	HCC1195	8.6
Lung	HCC15	9.2
Lung	HCC2279	8.4
Lung	HCC2935	9.9
Lung	HCC33	10.5
Lung	HCC366	9.2
Lung	HCC4006	8.9
Lung	HCC44	8.2
Lung	HCC78	9.1
Lung	HCC827	8.9
Lung	HCC95	8.9
Lung	HLC1	9.1
Lung	HLFA	8
Lung	HS229T	8.2
Lung	HS618T	7.8
Lung	IALM	9.4
Lung	KNS62	8
Lung	LC1F	8.8
Lung	LC1SQSF	9.2
Lung	LCLC103H	8.8
Lung	LCLC97TM1	9.7
Lung	LK2	9.6
Lung	LOUNH91	9
Lung	LU65	8.7
Lung	LU99	9
Lung	LUDLU1	8.8
Lung	LXF289	10.3
Lung	MORCPR	10
Lung	NCIH1048	9.8
Lung	NCIH1092	10.4
Lung	NCIH1105	10.6
Lung	NCIH1155	9.1
Lung	NCIH1184	9.7
Lung	NCIH1299	9.3
Lung	NCIH1339	9.1
Lung	NCIH1341	8.8
Lung	NCIH1355	9.4
Lung	NCIH1373	8.5
Lung	NCIH1385	8.4
Lung	NCIH1395	6.7
Lung	NCIH1435	7.3
Lung	NCIH1436	10.1
Lung	NCIH1437	9.4
Lung	NCIH146	9.2
Lung	NCIH1563	9.7
Lung	NCIH1568	9.7
Lung	NCIH1573	8.2
Lung	NCIH1581	9.1
Lung	NCIH1618	10.2
Lung	NCIH1623	8.8
Lung	NCIH1648	8.2
Lung	NCIH1650	9.1
Lung	NCIH1651	8.7
Lung	NCIH1666	8.8
Lung	NCIH1693	7.5
Lung	NCIH1694	9.6
Lung	NCIH1703	8.7
Lung	NCIH1734	8.8
Lung	NCIH1755	9.2
Lung	NCIH1781	9
Lung	NCIH1792	8.7
Lung	NCIH1793	9.3
Lung	NCIH1836	9.1
Lung	NCIH1838	8
Lung	NCIH1869	9.1
Lung	NCIH1876	11.7
Lung	NCIH1915	7.6
Lung	NCIH1930	10
Lung	NCIH1944	8.2
Lung	NCIH1963	10.4
Lung	NCIH196	8.7
Lung	NCIH1975	9.1
Lung	NCIH2009	8.8
Lung	NCIH2023	8.7
Lung	NCIH2029	10.1
Lung	NCIH2030	8.4
Lung	NCIH2066	9.3
Lung	NCIH2081	9.8
Lung	NCIH2085	8.2
Lung	NCIH2087	8.3
Lung	NCIH209	9.9
Lung	NCIH2106	8.9
Lung	NCIH2110	9.2
Lung	NCIH211	8.6
Lung	NCIH2122	8.5
Lung	NCIH2126	9.6
Lung	NCIH2141	10.9
Lung	NCIH2170	8.9
Lung	NCIH2171	10.6
Lung	NCIH2172	9.6
Lung	NCIH2196	9.2
Lung	NCIH2227	9.9
Lung	NCIH2228	9.3
Lung	NCIH226	8.7
Lung	NCIH2286	9.4
Lung	NCIH2291	9
Lung	NCIH2342	8.9
Lung	NCIH2347	7.5
Lung	NCIH23	7.9
Lung	NCIH2405	8.6
Lung	NCIH2444	8.4
Lung	NCIH292	8.9
Lung	NCIH322	8.2
Lung	NCIH3255	8.2
Lung	NCIH358	9.7
Lung	NCIH441	8.8
Lung	NCIH446	9.1
Lung	NCIH460	8.9
Lung	NCIH510	9.5
Lung	NCIH520	9.1
Lung	NCIH522	9.8
Lung	NCIH524	10.4
Lung	NCIH526	9.7
Lung	NCIH596	9.3
Lung	NCIH647	8.5
Lung	NCIH650	9.1
Lung	NCIH661	8.5
Lung	NCIH69	9.8
Lung	NCIH727	8.9
Lung	NCIH810	10
Lung	NCIH82	9.8
Lung	NCIH838	8.3
Lung	NCIH841	9.2
Lung	NCIH854	9.2
Lung	NCIH889	9.8
Lung	PC14	9.2
Lung	RERFLCAD1	9.1
Lung	RERFLCAD2	8.4
Lung	RERFLCAI	8.8
Lung	RERFLCKJ	8.7
Lung	RERFLCMS	8.6
Lung	RERFLCSQ1	8.6
Lung	SBC5	9.4
Lung	SCLC21H	10.8
Lung	SHP77	9.4
Lung	SKLU1	7.9
Lung	SKMES1	8.4
Lung	SQ1	8.6
Lung	SW1271	9.7
Lung	SW1573	8.9
Lung	SW900	8.8
Lung	VMRCLCD	8.7
Lung	VMRCLCP	8.8
Oesophagus	COLO680N	9.7
Oesophagus	ECGI10	9.8
Oesophagus	KYSE140	9.2
Oesophagus	KYSE150	9.4
Oesophagus	KYSE180	9.3
Oesophagus	KYSE270	9.5
Oesophagus	KYSE30	10.2
Oesophagus	KYSE410	8.4
Oesophagus	KYSE450	9
Oesophagus	KYSE510	9.9
Oesophagus	KYSE520	9.6
Oesophagus	KYSE70	9.8
Oesophagus	OE19	9.8
Oesophagus	OE33	8.5
Oesophagus	TE10	8.9
Oesophagus	TE11	8.9
Oesophagus	TE14	10.4
Oesophagus	TE15	8.7
Oesophagus	TE1	8.3
Oesophagus	TE4	9.2
Oesophagus	TE5	10
Oesophagus	TE6	8.9
Oesophagus	TE8	10.7
Oesophagus	TE9	9.4
Oesophagus	TT	9.5
Ovary	59M	9.3
Ovary	A2780	9.8
Ovary	CAOV3	7.9
Ovary	CAOV4	9.2
Ovary	COLO704	9.4
Ovary	COV318	9.6
Ovary	COV362	9.1
Ovary	COV434	9.2
Ovary	COV504	8.8
Ovary	COV644	9.4
Ovary	EFO21	8.7
Ovary	EFO27	9.8
Ovary	ES2	8.7
Ovary	FUOV1	9.5
Ovary	HEYA8	8.6
Ovary	HS571T	8.8
Ovary	IGROV1	9.3
Ovary	JHOC5	8.6
Ovary	JHOM1	8.8
Ovary	JHOM2B	9.7
Ovary	JHOS2	9
Ovary	JHOS4	8.6
Ovary	KURAMOCHI	9.7
Ovary	MCAS	8.4
Ovary	NIHOVCAR3	9.7
Ovary	OAW28	10
Ovary	OAW42	9.2
Ovary	OC314	9.1
Ovary	OC316	8.6
Ovary	ONCODG1	9.6
Ovary	OV56	8.5
Ovary	OV7	9.2
Ovary	OV90	9.8
Ovary	OVCAR4	8.3
Ovary	OVCAR8	9.1
Ovary	OVISE	9.3
Ovary	OVK18	9.4
Ovary	OVKATE	9.1
Ovary	OVMANA	8.3
Ovary	OVSAHO	8.2
Ovary	OVTOKO	7.2
Ovary	RMGI	8.6
Ovary	RMUGS	9
Ovary	SKOV3	9.2
Ovary	SNU119	8.4
Ovary	SNU840	8.6
Ovary	SNU8	9.5
Ovary	TOV112D	10.6
Ovary	TOV21G	9.2
Ovary	TYKNU	8.2
Pancreas	ASPC1	9
Pancreas	BXPC3	9.3
Pancreas	CAPAN1	10.2
Pancreas	CAPAN2	8.8
Pancreas	CFPAC1	8.1
Pancreas	DANG	9.3
Pancreas	HPAC	9.5
Pancreas	HPAFII	8.5
Pancreas	HS766T	9
Pancreas	HUPT3	8.9
Pancreas	HUPT4	9.3
Pancreas	KCIMOH1	9.4
Pancreas	KLM1	9.6
Pancreas	KP2	9
Pancreas	KP3	8.1
Pancreas	KP4	9.6
Pancreas	L33	9
Pancreas	MIAPACA2	9.5
Pancreas	PANC0203	9
Pancreas	PANC0213	9.8
Pancreas	PANC0327	8.7
Pancreas	PANC0403	7.6
Pancreas	PANC0504	8.7
Pancreas	PANC0813	9
Pancreas	PANC1005	8.9
Pancreas	PANC1	7.4
Pancreas	PATU8902	8.7
Pancreas	PATU8988S	8.8
Pancreas	PATU8988T	9.3
Pancreas	PK1	8.7
Pancreas	PK45H	9.4
Pancreas	PK59	9
Pancreas	PL45	8.3
Pancreas	PSN1	10.2
Pancreas	QGP1	9.3
Pancreas	SNU213	9
Pancreas	SNU324	9.1
Pancreas	SNU410	9.1
Pancreas	SU8686	8.5
Pancreas	SUIT2	9.4
Pancreas	SW1990	7.4
Pancreas	T3M4	8.4
Pancreas	TCCPAN2	8.7
Pancreas	YAPC	10
Pleura	ACCMESO1	7.8
Pleura	DM3	8.3
Pleura	ISTMES1	8.7
Pleura	ISTMES2	9.2
Pleura	JL1	9.5
Pleura	MPP89	9
Pleura	MSTO211H	8.2
Pleura	NCIH2052	8.7
Pleura	NCIH2452	9
Pleura	NCIH28	9.2
Prostate	22RV1	8.9
Prostate	DU145	8.3
Prostate	LNCAPCLONEFGC	9.7
Prostate	MDAPCA2B	9.3
Prostate	NCIH660	9.9
Prostate	PC3	8.1
Prostate	VCAP	10.7
Salivary gland	A253	9.5
Salivary gland	YD15	8.6
Skin	A101D	7.1
Skin	A2058	8.8
Skin	A375	9.1
Skin	C32	8.2
Skin	CHL1	9.2
Skin	CJM	9.1
Skin	COLO679	7.9
Skin	COLO741	8.4
Skin	COLO783	9.1
Skin	COLO792	9.5
Skin	COLO800	8.6
Skin	COLO818	7.5
Skin	COLO829	8.4
Skin	COLO849	8.9
Skin	G361	8.5
Skin	GRM	9.8
Skin	HMCB	9.2
Skin	HS294T	8.4
Skin	HS600T	8.4
Skin	HS688AT	8.5
Skin	HS695T	8.7
Skin	HS839T	8.6
Skin	HS852T	8.9
Skin	HS895T	7.7
Skin	HS934T	8.8
Skin	HS936T	8.3
Skin	HS939T	8.2
Skin	HS940T	8.6
Skin	HS944T	8.7
Skin	HT144	8.5
Skin	IGR1	7.6
Skin	IGR37	8.8
Skin	IGR39	8.9
Skin	IPC298	8.1
Skin	K029AX	8.4
Skin	LOXIMVI	9.7
Skin	MALME3M	7.9
Skin	MDAMB435S	8.7
Skin	MELHO	7.5
Skin	MELJUSO	8.4
Skin	MEWO	8.9
Skin	RPMI7951	8.4
Skin	RVH421	8.3
Skin	SH4	8.3
Skin	SKMEL1	8.4
Skin	SKMEL24	7.9
Skin	SKMEL28	8.2
Skin	SKMEL2	7.8
Skin	SKMEL30	8.4
Skin	SKMEL31	7.9
Skin	SKMEL3	8.2
Skin	SKMEL5	7.6
Skin	UACC257	7.5
Skin	UACC62	8.1
Skin	WM115	9.3
Skin	WM1799	8.7
Skin	WM2664	9.1
Skin	WM793	8.4
Skin	WM88	9.1
Skin	WM983B	8.8
Small intestine	HUTU80	9.6
Soft tissue	A204	8.9
Soft tissue	G401	9.5
Soft tissue	G402	9.3
Soft tissue	GCT	8.4
Soft tissue	HS729	9
Soft tissue	HT1080	8.5
Soft tissue	KYM1	8.8
Soft tissue	MESSA	9.9
Soft tissue	RD	9.9
Soft tissue	RH30	10.7
Soft tissue	RH41	11.6
Soft tissue	RKN	9.3
Soft tissue	S117	8.9
Soft tissue	SJRH30	10.7
Soft tissue	SKLMS1	8.7
Soft tissue	SKUT1	9
Soft tissue	TE125T	8.6
Soft tissue	TE159T	9
Soft tissue	TE441T	10.5
Soft tissue	TE617T	8.9
Stomach	2313287	8.6
Stomach	AGS	9.1
Stomach	AZ521	9.7
Stomach	ECC10	10.8
Stomach	ECC12	9.7
Stomach	FU97	8.8
Stomach	GCIY	9
Stomach	GSS	9.1
Stomach	GSU	9.1
Stomach	HGC27	8.9
Stomach	HS746T	8.7
Stomach	HUG1N	8.1
Stomach	IM95	9
Stomach	KATOIII	8.5
Stomach	KE39	8.7
Stomach	LMSU	8.4
Stomach	MKN1	9.7
Stomach	MKN45	10.3
Stomach	MKN74	8.6
Stomach	MKN7	8.7
Stomach	NCCSTCK140	9.7
Stomach	NCIN87	9.4
Stomach	NUGC2	10.1
Stomach	NUGC3	9.1
Stomach	NUGC4	9.7
Stomach	OCUM1	9.1
Stomach	RERFGC1B	9.6
Stomach	SH10TC	8.8
Stomach	SNU16	8.9
Stomach	SNU1	8.8
Stomach	SNU216	9.2
Stomach	SNU520	8.6
Stomach	SNU5	8.9
Stomach	SNU601	9.3
Stomach	SNU620	9.7
Stomach	SNU668	9.1
Stomach	SNU719	9.2
Stomach	TGBC11TKB	8.6
Thyroid	8305C	9.9
Thyroid	8505C	9.4
Thyroid	BCPAP	9.2
Thyroid	BHT101	8.8
Thyroid	CAL62	9.6
Thyroid	CGTHW1	9.5
Thyroid	FTC133	8.9
Thyroid	FTC238	9
Thyroid	ML1	8.8
Thyroid	SW579	8.9
Thyroid	TT2609C02	9.2
Thyroid	TT	8.3
Upper aerodigestive tract	BHY	9
Upper aerodigestive tract	BICR16	9.4
Upper aerodigestive tract	BICR18	8.7
Upper aerodigestive tract	BICR22	9.8
Upper aerodigestive tract	BICR31	9.2
Upper aerodigestive tract	BICR56	9.3
Upper aerodigestive tract	BICR6	9.9
Upper aerodigestive tract	CAL27	9.4
Upper aerodigestive tract	CAL33	9.6
Upper aerodigestive tract	DETROIT562	8.4
Upper aerodigestive tract	FADU	10.2
Upper aerodigestive tract	HS840T	8.2
Upper aerodigestive tract	HSC2	8.2
Upper aerodigestive tract	HSC3	8.5
Upper aerodigestive tract	HSC4	9.6
Upper aerodigestive tract	PECAPJ15	10.3
Upper aerodigestive tract	PECAPJ34CLONEC12	9.8
Upper aerodigestive tract	PECAPJ41CLONED2	8.7
Upper aerodigestive tract	PECAPJ49	9.3
Upper aerodigestive tract	SCC15	9.4
Upper aerodigestive tract	SCC25	9.8
Upper aerodigestive tract	SCC4	9
Upper aerodigestive tract	SCC9	8.8
Upper aerodigestive tract	SNU1076	9.8
Upper aerodigestive tract	SNU1214	9.9
Upper aerodigestive tract	SNU46	9.6
Upper aerodigestive tract	SNU899	9.2
Upper aerodigestive tract	YD10B	9.3
Upper aerodigestive tract	YD38	9.4
Upper aerodigestive tract	YD8	10.1
Urinary tract	5637	9.3
Urinary tract	639V	9
Urinary tract	647V	9
Urinary tract	BC3C	9.9
Urinary tract	BFTC905	9.7
Urinary tract	CAL29	8.9
Urinary tract	HS172T	8.2
Urinary tract	HT1197	8.7
Urinary tract	HT1376	9.3
Urinary tract	J82	9
Urinary tract	JMSU1	9.9
Urinary tract	KMBC2	10.2
Urinary tract	KU1919	9.3
Urinary tract	RT11284	9.5
Urinary tract	RT112	9.1
Urinary tract	RT4	8.1
Urinary tract	SCABER	8
Urinary tract	SW1710	10
Urinary tract	SW780	9.1
Urinary tract	T24	9.3
Urinary tract	TCCSUP	8.9
Urinary tract	UMUC1	9.7
Urinary tract	UMUC3	8.9
Urinary tract	VMCUB1	8.8

> The Human Protein Atlas (HPA)

[ TOP ]

Tissue	Expression Level (TPM)
Adipose tissue	11.3
Adrenal gland	12.4
Appendix	10.6
Bone marrow	5.2
Breast	8.8
Cerebral cortex	21.4
Cervix, uterine	13.1
Colon	7
Duodenum	8.3
Endometrium	20.2
Epididymis	12
Esophagus	8.5
Fallopian tube	17
Gallbladder	11.7
Heart muscle	6.6
Kidney	7
Liver	3.1
Lung	13.1
Lymph node	9.3
Ovary	13.6
Pancreas	2.3
Parathyroid gland	20.2
Placenta	13.3
Prostate	17.1
Rectum	6.5
Salivary gland	4.4
Seminal vesicle	17.1
Skeletal muscle	6.7
Skin	14.3
Small intestine	8.7
Smooth muscle	13.9
Spleen	17.8
Stomach	8.4
Testis	20
Thyroid gland	16.2
Tonsil	5.8
Urinary bladder	8.9

> Text Mining based Expression

[ TOP ]

PMID	Expression	Cancer	Evidence
12600283	underexpression; loss of expression	Nasopharyngeal Carcinoma	Down-expression or loss of BRD2 and BRD3 genes were detectable in NPC biopsies.

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Somatic copy number alteration in primary tomur tissue

> The Cancer Genome Atlas (TCGA)

[ TOP ]

Correlation between expression and SCNA as well as percentage of patients in different status.

Cancer	Full Name	# Sample	R	P	% Loss	% Neutral	% Gain	Status
BLCA	Bladder urothelial carcinoma	404	0.457	2.89e-22	40.1	44.6	15.3	Loss
BRCA	Breast invasive carcinoma	1075	0.562	1.25e-90	27.3	58.4	14.3	Neutral
CESC	Cervical and endocervical cancers	292	0.409	3.27e-13	17.5	62	20.5	Neutral
COAD	Colon adenocarcinoma	449	0.44	9.84e-23	12.7	71.9	15.4	Neutral
ESCA	Esophageal carcinoma	183	0.594	7.98e-19	30.1	39.9	30.1	Neutral
GBM	Glioblastoma multiforme	147	0.514	2.69e-11	15	68.7	16.3	Neutral
HNSC	Head and Neck squamous cell carcinoma	514	0.432	8.61e-25	12.5	53.7	33.9	Gain
KIRC	Kidney renal clear cell carcinoma	525	0.458	1.45e-28	29.5	67.8	2.7	Neutral
KIRP	Kidney renal papillary cell carcinoma	288	0.35	9.83e-10	11.5	86.8	1.7	Neutral
LAML	Acute Myeloid Leukemia	166	0.232	0.0026	0.6	98.2	1.2	Neutral
LGG	Brain Lower Grade Glioma	513	0.334	8.5e-15	9.9	82.7	7.4	Neutral
LIHC	Liver hepatocellular carcinoma	364	0.358	2.02e-12	28.8	60.2	11	Neutral
LUAD	Lung adenocarcinoma	512	0.539	5.7e-40	43.4	46.3	10.4	Loss
LUSC	Lung squamous cell carcinoma	498	0.529	3.2e-37	46.2	32.5	21.3	Loss
OV	Ovarian serous cystadenocarcinoma	300	0.646	9.2e-37	59.3	29	11.7	Loss
PAAD	Pancreatic adenocarcinoma	177	0.47	4.31e-11	21.5	71.2	7.3	Neutral
PCPG	Pheochromocytoma and Paraganglioma	162	0.264	0.000685	7.4	89.5	3.1	Neutral
PRAD	Prostate adenocarcinoma	491	0.453	3.47e-26	2.2	86.2	11.6	Neutral
READ	Rectum adenocarcinoma	164	0.518	1.18e-12	18.3	60.4	21.3	Neutral
SARC	Sarcoma	255	0.289	2.8e-06	23.1	51.4	25.5	Neutral
SKCM	Skin Cutaneous Melanoma	367	0.561	9.48e-32	46.6	45.8	7.6	Loss
STAD	Stomach adenocarcinoma	413	0.538	2.23e-32	18.9	54.7	26.4	Neutral
TGCT	Testicular Germ Cell Tumors	150	0.375	2.27e-06	39.3	49.3	11.3	Loss
THCA	Thyroid carcinoma	497	0.429	1.06e-23	5.6	93.4	1	Neutral
THYM	Thymoma	119	0.097	0.295	2.5	87.4	10.1	Neutral
UCEC	Uterine Corpus Endometrial Carcinoma	537	0.43	1.28e-25	24.2	72.4	3.4	Neutral

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Methylation level in the promoter region of CR

> Methylation level in the promoter region of CR

[ TOP ]

Correlation between expression and methylation as well as differential methylation analysis.

Cancer	Full Name	R	P	# N	# T	Delta beta (T vs N)	P value (T vs N)	Status
BLCA	Bladder urothelial carcinoma	-0.229	2.02e-06	17	408	0.003	0.863	NS/NA
BRCA	Breast invasive carcinoma	-0.411	0	83	785	-0.055	3.11e-09	NS/NA
CESC	Cervical and endocervical cancers	-0.28	6.2e-07	3	306	NA	NA	NS/NA
COAD	Colon adenocarcinoma	-0.186	0.000904	19	297	0.005	0.000263	NS/NA
ESCA	Esophageal carcinoma	-0.247	0.000548	9	185	NA	NA	NS/NA
GBM	Glioblastoma multiforme	-0.619	8.59e-08	1	64	NA	NA	NS/NA
HNSC	Head and Neck squamous cell carcinoma	-0.167	9.77e-05	20	522	0.003	0.000116	NS/NA
KIRC	Kidney renal clear cell carcinoma	-0.243	5.65e-06	24	319	0.172	2.99e-09	NS/NA
KIRP	Kidney renal papillary cell carcinoma	-0.357	2.82e-10	23	275	0.034	0.103	NS/NA
LAML	Acute Myeloid Leukemia	-0.171	0.026	0	170	NA	NA	NS/NA
LGG	Brain Lower Grade Glioma	-0.439	0	0	530	NA	NA	NS/NA
LIHC	Liver hepatocellular carcinoma	-0.248	3.57e-07	41	373	-0.017	3.98e-15	NS/NA
LUAD	Lung adenocarcinoma	-0.191	2.81e-05	21	456	0.044	0.00305	NS/NA
LUSC	Lung squamous cell carcinoma	-0.138	0.00727	8	370	NA	NA	NS/NA
OV	Ovarian serous cystadenocarcinoma	-0.533	0.148	0	9	NA	NA	NS/NA
PAAD	Pancreatic adenocarcinoma	-0.182	0.0138	4	179	NA	NA	NS/NA
PCPG	Pheochromocytoma and Paraganglioma	-0.214	0.00335	3	184	NA	NA	NS/NA
PRAD	Prostate adenocarcinoma	-0.397	0	35	498	-0.081	0.00141	NS/NA
READ	Rectum adenocarcinoma	-0.294	0.00295	2	99	NA	NA	NS/NA
SARC	Sarcoma	-0.432	1.55e-13	0	263	NA	NA	NS/NA
SKCM	Skin Cutaneous Melanoma	-0.226	7.72e-07	1	471	NA	NA	NS/NA
STAD	Stomach adenocarcinoma	-0.25	1.12e-06	0	372	NA	NA	NS/NA
TGCT	Testicular Germ Cell Tumors	-0.376	1.56e-06	0	156	NA	NA	NS/NA
THCA	Thyroid carcinoma	-0.278	2.52e-11	50	509	0.034	0.707	NS/NA
THYM	Thymoma	-0.193	0.0333	2	120	NA	NA	NS/NA
UCEC	Uterine Corpus Endometrial Carcinoma	-0.23	6.01e-07	34	431	0.026	0.122	NS/NA

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Primary tumor tissue from TCGA > Normal tumor tissue from HPA

>The Cancer Genome Atlas (TCGA) [ TOP ]
There is no record.

> The Human Protein Atlas (HPA)

[ TOP ]

Tissue	Level	Level Name
Adrenal gland	3	High
Appendix	2	Medium
Bone marrow	1	Low
Breast	2	Medium
Bronchus	3	High
Caudate	2	Medium
Cerebellum	2	Medium
Cerebral cortex	2	Medium
Cervix, uterine	3	High
Colon	2	Medium
Duodenum	2	Medium
Endometrium	2	Medium
Epididymis	3	High
Esophagus	2	Medium
Fallopian tube	2	Medium
Gallbladder	2	Medium
Heart muscle	3	High
Hippocampus	1	Low
Kidney	2	Medium
Liver	1	Low
Lung	2	Medium
Lymph node	1	Low
Nasopharynx	2	Medium
Oral mucosa	2	Medium
Ovary	3	High
Pancreas	2	Medium
Parathyroid gland	3	High
Placenta	2	Medium
Prostate	2	Medium
Rectum	2	Medium
Salivary gland	2	Medium
Seminal vesicle	2	Medium
Skeletal muscle	3	High
Skin	3	High
Small intestine	2	Medium
Smooth muscle	2	Medium
Soft tissue	2	Medium
Spleen	1	Low
Stomach	2	Medium
Testis	2	Medium
Thyroid gland	3	High
Tonsil	2	Medium
Urinary bladder	3	High
Vagina	2	Medium

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Association between expresson and subtype > Overall survival analysis based on expression > Association between expresson and stage > Association between expresson and grade

> Subtype

[ TOP ]

Association between expresson and subtype.

Cancer	Full Name	# Patients	P Value (Kruskal-Wallis)	Association	Source
BLCA	Bladder urothelial carcinoma	128	0.544	NS	24476821
BRCA	Breast invasive carcinoma	521	5.39e-09	Significant	23000897
COAD	Colon adenocarcinoma	149	0.638	NS	22810696
GBM	Glioblastoma multiforme	157	1.4e-06	Significant	26824661
HNSC	Head and Neck squamous cell carcinoma	279	3.62e-09	Significant	25631445
KIRP	Kidney renal papillary cell carcinoma	161	1.58e-05	Significant	26536169
LGG	Brain Lower Grade Glioma	513	1.11e-18	Significant	26824661
LUAD	Lung adenocarcinoma	230	0.237	NS	25079552
LUSC	Lung squamous cell carcinoma	178	6.38e-05	Significant	22960745
OV	Ovarian serous cystadenocarcinoma	287	1.09e-05	Significant	21720365
PRAD	Prostate adenocarcinoma	333	1.62e-05	Significant	26544944
READ	Rectum adenocarcinoma	67	0.753	NS	22810696
SKCM	Skin Cutaneous Melanoma	315	0.0179	Significant	26091043
STAD	Stomach adenocarcinoma	277	2.43e-05	Significant	25079317
THCA	Thyroid carcinoma	391	0.496	NS	25417114
UCEC	Uterine Corpus Endometrial Carcinoma	232	0.135	NS	23636398

> Overall survival

[ TOP ]

Overall survival analysis based on expression.

Cancer	Full Name	# Patients	Hazard Ratio	P Value (Log Rank Test)	Association
BLCA	Bladder urothelial carcinoma	405	0.818	0.347	NS
BRCA	Breast invasive carcinoma	1079	1.288	0.268	NS
CESC	Cervical and endocervical cancers	291	0.697	0.329	NS
COAD	Colon adenocarcinoma	439	1.644	0.062	NS
ESCA	Esophageal carcinoma	184	0.639	0.185	NS
GBM	Glioblastoma multiforme	158	0.733	0.216	NS
HNSC	Head and Neck squamous cell carcinoma	518	0.775	0.207	NS
KIRC	Kidney renal clear cell carcinoma	531	0.637	0.0345	Longer
KIRP	Kidney renal papillary cell carcinoma	287	0.616	0.269	NS
LAML	Acute Myeloid Leukemia	149	0.457	0.00885	Longer
LGG	Brain Lower Grade Glioma	511	0.433	0.000257	Longer
LIHC	Liver hepatocellular carcinoma	365	1.101	0.693	NS
LUAD	Lung adenocarcinoma	502	1.125	0.567	NS
LUSC	Lung squamous cell carcinoma	494	1.234	0.309	NS
OV	Ovarian serous cystadenocarcinoma	303	1.101	0.65	NS
PAAD	Pancreatic adenocarcinoma	177	0.771	0.382	NS
PCPG	Pheochromocytoma and Paraganglioma	179	0.607	0.681	NS
PRAD	Prostate adenocarcinoma	497	3.056	0.313	NS
READ	Rectum adenocarcinoma	159	0.728	0.588	NS
SARC	Sarcoma	259	1.131	0.651	NS
SKCM	Skin Cutaneous Melanoma	459	1.325	0.151	NS
STAD	Stomach adenocarcinoma	388	0.806	0.345	NS
TGCT	Testicular Germ Cell Tumors	134	0	0.161	NS
THCA	Thyroid carcinoma	500	1.399	0.645	NS
THYM	Thymoma	119	0.182	0.0891	NS
UCEC	Uterine Corpus Endometrial Carcinoma	543	1.118	0.706	NS

> Stage

[ TOP ]

Association between expresson and stage.

Cancer	Full Name	# Patients	R Value (Spearman)	P Value (Spearman)	Association
BLCA	Bladder urothelial carcinoma	406	-0.005	0.924	NS
BRCA	Breast invasive carcinoma	1071	0.011	0.726	NS
CESC	Cervical and endocervical cancers	167	-0.063	0.42	NS
COAD	Colon adenocarcinoma	445	0.092	0.0533	NS
ESCA	Esophageal carcinoma	162	-0.014	0.86	NS
HNSC	Head and Neck squamous cell carcinoma	448	0.078	0.101	NS
KIRC	Kidney renal clear cell carcinoma	531	-0.168	0.000104	Lower
KIRP	Kidney renal papillary cell carcinoma	260	-0.055	0.376	NS
LIHC	Liver hepatocellular carcinoma	347	0.104	0.0532	NS
LUAD	Lung adenocarcinoma	507	0.05	0.263	NS
LUSC	Lung squamous cell carcinoma	497	0.01	0.831	NS
OV	Ovarian serous cystadenocarcinoma	302	-0.119	0.0394	Lower
PAAD	Pancreatic adenocarcinoma	176	-0.129	0.0875	NS
READ	Rectum adenocarcinoma	156	0.061	0.451	NS
SKCM	Skin Cutaneous Melanoma	410	-0.068	0.169	NS
STAD	Stomach adenocarcinoma	392	-0.018	0.717	NS
TGCT	Testicular Germ Cell Tumors	81	-0.073	0.515	NS
THCA	Thyroid carcinoma	499	-0.055	0.22	NS
UCEC	Uterine Corpus Endometrial Carcinoma	501	-0.015	0.737	NS

> Grade

[ TOP ]

Association between expresson and grade.

Cancer	Full Name	# Patients	R Value (Spearman)	P Value (Spearman)	Association
CESC	Cervical and endocervical cancers	272	0.025	0.684	NS
HNSC	Head and Neck squamous cell carcinoma	498	0.181	5.09e-05	Higher
KIRC	Kidney renal clear cell carcinoma	525	-0.175	5.8e-05	Lower
LGG	Brain Lower Grade Glioma	514	-0.078	0.0768	NS
LIHC	Liver hepatocellular carcinoma	366	0.018	0.728	NS
OV	Ovarian serous cystadenocarcinoma	296	-0.057	0.328	NS
PAAD	Pancreatic adenocarcinoma	176	-0.014	0.858	NS
STAD	Stomach adenocarcinoma	406	-0.014	0.775	NS
UCEC	Uterine Corpus Endometrial Carcinoma	534	0.061	0.161	NS

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Targets inferred by reverse engineering method > Targets identified by ChIP-seq data

> Targets inferred by reverse engineering method [ TOP ]

> Targets identified by ChIP-seq data [ TOP ]

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Drugs from DrugBank database

> Drugs from DrugBank database [ TOP ]
There is no record for BRD3.

Summary
Symbol	BRD3
Name	bromodomain containing 3
Aliases	RING3L; ORFX; KIAA0043; RING3-like; bromodomain-containing 3; Bromodomain-containing protein 3
Location	9q34.2
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Protein-Protein Interaction Network > miRNA Regulatory Relationship > Interactions from Text Mining

> Protein-Protein Interaction Network [ TOP ]

> miRNA Regulatory Relationship [ TOP ]

> Interactions from Text Mining

[ TOP ]

PMID	Cancer	Hierarchy	Gene	Relation to CR	Evidence
23463074	NUT Midline Carcinoma	partner	NUT	Fusion	The rearrangements most often take the form of BRD4-NUT fusions, and in a minority of cases, BRD3-NUT or NUT-variant fusions.
22017582	NUT Midline Carcinoma	partner	NUT	Fusion	The rearrangements most often take the form of BRD4-NUT fusions, and in a minority of cases, BRD3-NUT or NUT-variant fusions.
20951314	NUT Midline Carcinoma	partner	NUT	Fusion	The rearrangements most often take the form of BRD4-NUT fusions, and in a minority of cases, BRD3-NUT or NUT-variant fusions.
20017639	NUT Midline Carcinoma	partner	NUT	Fusion	The rearrangements most often take the form of BRD4-NUT fusions, and in a minority of cases, BRD3-NUT or NUT-variant fusions.
17934517	NUT Midline Carcinoma	partner	NUT	Fusion	The rearrangements most often take the form of BRD4-NUT fusions, and in a minority of cases, BRD3-NUT or NUT-variant fusions.
12600283	Nasopharyngeal Carcinoma	upstream	BRD7	positive regulation	BRD7 protein could respectively interact with proteins, BRD2 and BRD3, and BRD7 could up-regulate the expression levels of BRD2 and BRD3 genes in mRNA level to some extent.
25466466	Pulmonary NUT Midline Carcinoma	partner	NUT	Fusion	In more than two-thirds of NMC cases, a gene fusion between NUT and BRD4 or BRD3 has been documented; other fusions are rare.