Browse CDY2B in pancancer

Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Domain, Function and Classification
> Gene Ontology
> KEGG and Reactome Pathway
> Domain, Function and Classification
 
Domain PF00385 Chromo (CHRromatin Organisation MOdifier) domain
PF00378 Enoyl-CoA hydratase/isomerase
Function

May have histone acetyltransferase activity.

Classification
Class Modification Substrate Product PubMed
Histone modification write Histone acetylation # # 22498752
> Gene Ontology
 
Biological Process GO:0006473 protein acetylation
GO:0006475 internal protein amino acid acetylation
GO:0007283 spermatogenesis
GO:0016570 histone modification
GO:0016573 histone acetylation
GO:0018205 peptidyl-lysine modification
GO:0018393 internal peptidyl-lysine acetylation
GO:0018394 peptidyl-lysine acetylation
GO:0043543 protein acylation
GO:0048232 male gamete generation
Molecular Function GO:0004402 histone acetyltransferase activity
GO:0008080 N-acetyltransferase activity
GO:0016407 acetyltransferase activity
GO:0016410 N-acyltransferase activity
GO:0016746 transferase activity, transferring acyl groups
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
GO:0034212 peptide N-acetyltransferase activity
GO:0061733 peptide-lysine-N-acetyltransferase activity
Cellular Component -
> KEGG and Reactome Pathway
 
KEGG -
Reactome -
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Mutation landscape in primary tumor tissue from TCGA
> Mutation landscape in cancer cell line from CCLE
> All mutations from COSMIC database V81
> Variations from text mining
> The Cancer Genome Atlas (TCGA)
 
There is no record for CDY2B.
> Cancer Cell Line Encyclopedia (CCLE)
 
There is no record.
> Catalogue of Somatic Mutations in Cancer (COSMIC)
 
COSMIC ID CDS change AA change Mutation Type Anatomical Site
COSM3682802c.908G>Ap.R303KSubstitution - MissenseHaematopoietic_and_lymphoid_tissue
COSM1569973c.923_924insAp.N308fs*9Insertion - FrameshiftLarge_intestine
COSM5831355c.223_224insTp.S75fs*18Insertion - FrameshiftLarge_intestine
COSM3682800c.1114A>Cp.N372HSubstitution - MissenseHaematopoietic_and_lymphoid_tissue
COSM3682803c.238A>Cp.R80RSubstitution - coding silentHaematopoietic_and_lymphoid_tissue
COSM3682801c.1110C>Ap.I370ISubstitution - coding silentHaematopoietic_and_lymphoid_tissue
> Text Mining based Variations
 
There is no record for CDY2B.
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Post-translational modification (PTM)
> Post-translational modification (PTM)
 
There is no PTM data
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Expression analysis in primary tumor tissue from TCGA
> Expression level in cancer cell line from CCLE
> Expression level in human normal tissue from HPA
> Text mining based expression change
> The Cancer Genome Atlas (TCGA)
 
There is no record.
> Cancer Cell Line Encyclopedia (CCLE)
 

There is no record.
> The Human Protein Atlas (HPA)
 


Tissue Expression Level (TPM)
Adipose tissue 0
Adrenal gland 0
Appendix 0
Bone marrow 0
Breast 0
Cerebral cortex 0
Cervix, uterine 0
Colon 0
Duodenum 0
Endometrium 0
Epididymis 0
Esophagus 0
Fallopian tube 0
Gallbladder 0
Heart muscle 0
Kidney 0
Liver 0
Lung 0
Lymph node 0
Ovary 0
Pancreas 0
Parathyroid gland 0
Placenta 0
Prostate 0
Rectum 0
Salivary gland 0
Seminal vesicle 0
Skeletal muscle 0
Skin 0
Small intestine 0
Smooth muscle 0
Spleen 0
Stomach 0
Testis 0.2
Thyroid gland 0
Tonsil 0
Urinary bladder 0
> Text Mining based Expression
 
There is no record.
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Somatic copy number alteration in primary tomur tissue
> The Cancer Genome Atlas (TCGA)
 
There is no record.
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Methylation level in the promoter region of CR
> Methylation level in the promoter region of CR
 
There is no record.
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Primary tumor tissue from TCGA
> Normal tumor tissue from HPA
>The Cancer Genome Atlas (TCGA)
 
There is no record.
> The Human Protein Atlas (HPA)
 
There is no antibody staining data.
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Association between expresson and subtype
> Overall survival analysis based on expression
> Association between expresson and stage
> Association between expresson and grade
> Subtype
 
There is no record.
> Overall survival
 
There is no data.
> Stage
 
There is no data.
> Grade
 
There is no data.
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Targets inferred by reverse engineering method
> Targets identified by ChIP-seq data
> Targets inferred by reverse engineering method
 
> Targets identified by ChIP-seq data
 
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Drugs from DrugBank database
> Drugs from DrugBank database
 
There is no record for CDY2B.
Summary
SymbolCDY2B
Namechromodomain Y-linked 2B
Aliases Y chromosome chromodomain protein 2B; chromodomain protein, Y chromosome, 2 related; testis-specific chromod ......
LocationYq11.222
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Protein-Protein Interaction Network
> miRNA Regulatory Relationship
> Interactions from Text Mining
> Protein-Protein Interaction Network
 
> miRNA Regulatory Relationship
 
There is no record for CDY2B.
> Interactions from Text Mining
 
There is no record for CDY2B.