CR2Cancer

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Domain, Function and Classification > Gene Ontology > KEGG and Reactome Pathway

> Domain, Function and Classification

[ TOP ]

Domain

PF01429 Methyl-CpG binding domain
PF05033 Pre-SET motif
PF00856 SET domain

Function

Histone methyltransferase that specifically trimethylates 'Lys-9' of histone H3. H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. Mainly functions in euchromatin regions, thereby playing a central role in the silencing of euchromatic genes. H3 'Lys-9' trimethylation is coordinated with DNA methylation. Probably forms a complex with MBD1 and ATF7IP that represses transcription and couples DNA methylation and histone 'Lys-9' trimethylation. Its activity is dependent on MBD1 and is heritably maintained through DNA replication by being recruited by CAF-1. SETDB1 is targeted to histone H3 by TRIM28/TIF1B, a factor recruited by KRAB zinc-finger proteins. Probably forms a corepressor complex required for activated KRAS-mediated promoter hypermethylation and transcriptional silencing of tumor suppressor genes (TSGs) or other tumor-related genes in colorectal cancer (CRC) cells (PubMed:24623306). Also required to maintain a transcriptionally repressive state of genes in undifferentiated embryonic stem cells (ESCs) (PubMed:24623306). Associates at promoter regions of tumor suppressor genes (TSGs) leading to their gene silencing (PubMed:24623306). The SETDB1-TRIM28-ZNF274 complex may play a role in recruiting ATRX to the 3'-exons of zinc-finger coding genes with atypical chromatin signatures to establish or maintain/protect H3K9me3 at these transcriptionally active regions (PubMed:27029610).

Classification

Class	Modification	Substrate	Product	PubMed
Histone modification write	Histone methylation	H3K9	H3K9me3	11959841

> Gene Ontology [ TOP ]
Biological Process	GO:0006342 chromatin silencing GO:0006346 methylation-dependent chromatin silencing GO:0006479 protein methylation GO:0007265 Ras protein signal transduction GO:0007584 response to nutrient GO:0008213 protein alkylation GO:0009991 response to extracellular stimulus GO:0016458 gene silencing GO:0016570 histone modification GO:0016571 histone methylation GO:0018022 peptidyl-lysine methylation GO:0018205 peptidyl-lysine modification GO:0031667 response to nutrient levels GO:0031935 regulation of chromatin silencing GO:0031937 positive regulation of chromatin silencing GO:0032259 methylation GO:0033273 response to vitamin GO:0034968 histone lysine methylation GO:0040029 regulation of gene expression, epigenetic GO:0043414 macromolecule methylation GO:0045471 response to ethanol GO:0045814 negative regulation of gene expression, epigenetic GO:0051052 regulation of DNA metabolic process GO:0051054 positive regulation of DNA metabolic process GO:0060968 regulation of gene silencing GO:0090308 regulation of methylation-dependent chromatin silencing GO:0090309 positive regulation of methylation-dependent chromatin silencing GO:0097305 response to alcohol GO:1902275 regulation of chromatin organization GO:1905269 positive regulation of chromatin organization
Molecular Function	GO:0003682 chromatin binding GO:0008168 methyltransferase activity GO:0008170 N-methyltransferase activity GO:0008276 protein methyltransferase activity GO:0008757 S-adenosylmethionine-dependent methyltransferase activity GO:0016278 lysine N-methyltransferase activity GO:0016279 protein-lysine N-methyltransferase activity GO:0016741 transferase activity, transferring one-carbon groups GO:0018024 histone-lysine N-methyltransferase activity GO:0042054 histone methyltransferase activity GO:1990841 promoter-specific chromatin binding
Cellular Component	-

> KEGG and Reactome Pathway [ TOP ]
KEGG	hsa04550 Signaling pathways regulating pluripotency of stem cells hsa00310 Lysine degradation
Reactome	R-HSA-3247509: Chromatin modifying enzymes R-HSA-4839726: Chromatin organization R-HSA-3214841: PKMTs methylate histone lysines

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Mutation landscape in primary tumor tissue from TCGA > Mutation landscape in cancer cell line from CCLE > All mutations from COSMIC database V81 > Variations from text mining

> The Cancer Genome Atlas (TCGA) [ TOP ]

> Cancer Cell Line Encyclopedia (CCLE) [ TOP ]

> Catalogue of Somatic Mutations in Cancer (COSMIC)

[ TOP ]

COSMIC ID	CDS change	AA change	Mutation Type	Anatomical Site
COSM3473530	c.1727A>G	p.H576R	Substitution - Missense	Skin
COSM1626415	c.3642T>G	p.L1214L	Substitution - coding silent	Liver
COSM2182740	c.2403A>G	p.L801L	Substitution - coding silent	Large_intestine
COSM2182774	c.3059A>C	p.E1020A	Substitution - Missense	Large_intestine
COSM3703783	c.1765A>G	p.M589V	Substitution - Missense	Liver
COSM4022088	c.3722A>G	p.D1241G	Substitution - Missense	Stomach
COSM1626409	c.3447G>C	p.K1149N	Substitution - Missense	Liver
COSM3703783	c.1765A>G	p.M589V	Substitution - Missense	Liver
COSM4543208	c.3335G>A	p.S1112N	Substitution - Missense	Skin
COSM5497568	c.2137C>T	p.P713S	Substitution - Missense	Biliary_tract
COSM1651167	c.3138C>T	p.D1046D	Substitution - coding silent	Endometrium
COSM5704920	c.3272C>G	p.S1091C	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM1651164	c.1483C>T	p.R495*	Substitution - Nonsense	Endometrium
COSM3473533	c.1906C>T	p.R636W	Substitution - Missense	Stomach
COSM5968803	c.1512C>T	p.S504S	Substitution - coding silent	Upper_aerodigestive_tract
COSM1667915	c.796G>A	p.A266T	Substitution - Missense	Large_intestine
COSM1491743	c.945G>A	p.R315R	Substitution - coding silent	Kidney
COSM4022065	c.1694G>A	p.R565H	Substitution - Missense	Stomach
COSM4454316	c.460A>G	p.M154V	Substitution - Missense	Skin
COSM1265356	c.1069G>C	p.E357Q	Substitution - Missense	Oesophagus
COSM1333900	c.3766C>T	p.R1256W	Substitution - Missense	Stomach
COSM1240161	c.284T>C	p.L95S	Substitution - Missense	Oesophagus
COSM4833167	c.1125C>T	p.V375V	Substitution - coding silent	Cervix
COSM1583427	c.3214G>T	p.G1072*	Substitution - Nonsense	Endometrium
COSM1579287	c.3820G>A	p.G1274S	Substitution - Missense	Fallopian_tube
COSM5735627	c.2644G>T	p.G882C	Substitution - Missense	Small_intestine
COSM4022068	c.1829G>A	p.R610Q	Substitution - Missense	Stomach
COSM1646000	c.2462A>G	p.D821G	Substitution - Missense	Lung
COSM3723525	c.1815A>G	p.L605L	Substitution - coding silent	Upper_aerodigestive_tract
COSM4459652	c.1134C>T	p.L378L	Substitution - coding silent	Skin
COSM4386724	c.600_601insT	p.S201fs*1	Insertion - Frameshift	Lung
COSM3473521	c.1408C>T	p.Q470*	Substitution - Nonsense	Skin
COSM119962	c.2090T>C	p.I697T	Substitution - Missense	Ovary
COSM1626411	c.3632A>T	p.D1211V	Substitution - Missense	Liver
COSM5347993	c.120delT	p.R41fs*21	Deletion - Frameshift	Liver
COSM1472590	c.3176G>A	p.R1059Q	Substitution - Missense	Endometrium
COSM3979781	c.1727A>T	p.H576L	Substitution - Missense	Ovary
COSM4576244	c.3510A>G	p.K1170K	Substitution - coding silent	Liver
COSM2182754	c.2621delC	p.C876fs*8	Deletion - Frameshift	Large_intestine
COSM1583404	c.607C>T	p.R203*	Substitution - Nonsense	Endometrium
COSM1265354	c.2149G>A	p.V717I	Substitution - Missense	Oesophagus
COSM4725186	c.608G>A	p.R203Q	Substitution - Missense	Large_intestine
COSM4762572	c.1745G>T	p.C582F	Substitution - Missense	Stomach
COSM5978093	c.1586C>T	p.P529L	Substitution - Missense	Upper_aerodigestive_tract
COSM2182695	c.1619C>T	p.S540L	Substitution - Missense	Cervix
COSM1626417	c.3670-8A>T	p.?	Unknown	Liver
COSM3418025	c.2410C>T	p.R804W	Substitution - Missense	Large_intestine
COSM1651163	c.2549G>A	p.G850D	Substitution - Missense	Endometrium
COSM140375	c.1606G>T	p.A536S	Substitution - Missense	Skin
COSM4576241	c.1375C>G	p.P459A	Substitution - Missense	Bone
COSM4970577	c.3537A>G	p.S1179S	Substitution - coding silent	Central_nervous_system
COSM3473539	c.2674A>G	p.N892D	Substitution - Missense	Skin
COSM5434621	c.136G>C	p.E46Q	Substitution - Missense	Oesophagus
COSM4762568	c.1505G>C	p.G502A	Substitution - Missense	Stomach
COSM1583407	c.80A>G	p.Q27R	Substitution - Missense	Endometrium
COSM5207753	c.2613G>C	p.E871D	Substitution - Missense	Breast
COSM2182760	c.2844delC	p.P950fs*16	Deletion - Frameshift	Large_intestine
COSM1265358	c.2782C>T	p.R928W	Substitution - Missense	Oesophagus
COSM1583403	c.1493C>A	p.S498Y	Substitution - Missense	Endometrium
COSM3473517	c.451C>T	p.R151C	Substitution - Missense	Skin
COSM1600772	c.3028delG	p.E1011fs*19	Deletion - Frameshift	Liver
COSM1583405	c.268A>G	p.T90A	Substitution - Missense	Endometrium
COSM5351998	c.1685C>T	p.P562L	Substitution - Missense	Kidney
COSM5460646	c.579C>T	p.S193S	Substitution - coding silent	Large_intestine
COSM4022074	c.2345A>G	p.N782S	Substitution - Missense	Stomach
COSM5937972	c.3670-6C>T	p.?	Unknown	Skin
COSM4838460	c.3817G>C	p.E1273Q	Substitution - Missense	Cervix
COSM1289979	c.2143A>G	p.K715E	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM4725211	c.3680G>A	p.S1227N	Substitution - Missense	Large_intestine
COSM3710310	c.700T>C	p.F234L	Substitution - Missense	Upper_aerodigestive_tract
COSM4022085	c.3486A>T	p.K1162N	Substitution - Missense	Stomach
COSM1600766	c.2503A>G	p.K835E	Substitution - Missense	Liver
COSM1333896	c.3458-2A>G	p.?	Unknown	Large_intestine
COSM3740643	c.2422T>C	p.F808L	Substitution - Missense	Liver
COSM5704914	c.1297C>T	p.Q433*	Substitution - Nonsense	Haematopoietic_and_lymphoid_tissue
COSM3473536	c.2003G>A	p.R668Q	Substitution - Missense	Skin
COSM4725198	c.1369C>T	p.P457S	Substitution - Missense	Large_intestine
COSM1472586	c.2288C>T	p.S763F	Substitution - Missense	Breast
COSM1472587	c.2343_2344insA	p.N782fs*7	Insertion - Frameshift	Breast
COSM5771807	c.392A>G	p.D131G	Substitution - Missense	Breast
COSM1665745	c.2881delC	p.S962fs*4	Deletion - Frameshift	Kidney
COSM4762576	c.2885C>G	p.S962*	Substitution - Nonsense	Stomach
COSM1626407	c.1493C>G	p.S498C	Substitution - Missense	Liver
COSM6009470	c.1719C>T	p.Y573Y	Substitution - coding silent	Skin
COSM3665396	c.2086_2095del10	p.E696fs*48	Deletion - Frameshift	Liver
COSM1289981	c.3080C>G	p.S1027*	Substitution - Nonsense	Haematopoietic_and_lymphoid_tissue
COSM4402672	c.956A>T	p.K319M	Substitution - Missense	Skin
COSM5993303	c.3658C>T	p.R1220C	Substitution - Missense	Prostate
COSM5377571	c.3382G>A	p.V1128I	Substitution - Missense	Skin
COSM2182774	c.3059A>C	p.E1020A	Substitution - Missense	Large_intestine
COSM4393322	c.3862G>C	p.G1288R	Substitution - Missense	Prostate
COSM3418025	c.2410C>T	p.R804W	Substitution - Missense	Large_intestine
COSM1583424	c.3609C>T	p.G1203G	Substitution - coding silent	Endometrium
COSM5735619	c.674G>A	p.G225E	Substitution - Missense	Small_intestine
COSM3771443	c.587G>A	p.G196D	Substitution - Missense	Pancreas
COSM4836505	c.388G>A	p.D130N	Substitution - Missense	Cervix
COSM4944398	c.3340A>C	p.T1114P	Substitution - Missense	Liver
COSM4576244	c.3510A>G	p.K1170K	Substitution - coding silent	Liver
COSM1600764	c.297C>T	p.F99F	Substitution - coding silent	Liver
COSM1583402	c.1842G>A	p.R614R	Substitution - coding silent	Endometrium
COSM3473521	c.1408C>T	p.Q470*	Substitution - Nonsense	Skin
COSM5786433	c.3579T>A	p.V1193V	Substitution - coding silent	Breast
COSM1333895	c.2767C>T	p.R923W	Substitution - Missense	Large_intestine
COSM3360317	c.2078G>A	p.C693Y	Substitution - Missense	Kidney
COSM1646003	c.99G>T	p.L33L	Substitution - coding silent	Lung
COSM3801779	c.3336T>G	p.S1112R	Substitution - Missense	Breast
COSM3849260	c.1100T>G	p.V367G	Substitution - Missense	Pancreas
COSM1333887	c.989G>A	p.R330H	Substitution - Missense	Large_intestine
COSM3418025	c.2410C>T	p.R804W	Substitution - Missense	Large_intestine
COSM4725204	c.2698G>T	p.E900*	Substitution - Nonsense	Large_intestine
COSM4022057	c.743C>T	p.A248V	Substitution - Missense	Stomach
COSM4995271	c.2011C>T	p.Q671*	Substitution - Nonsense	Upper_aerodigestive_tract
COSM1651166	c.3695T>G	p.V1232G	Substitution - Missense	Endometrium
COSM1333900	c.3766C>T	p.R1256W	Substitution - Missense	Large_intestine
COSM5750974	c.3150G>T	p.K1050N	Substitution - Missense	Stomach
COSM4933207	c.87G>A	p.V29V	Substitution - coding silent	Liver
COSM4849666	c.493C>G	p.Q165E	Substitution - Missense	Cervix
COSM3788658	c.3826G>C	p.E1276Q	Substitution - Missense	Urinary_tract
COSM5052545	c.1164C>A	p.I388I	Substitution - coding silent	Stomach
COSM3360320	c.2101C>T	p.P701S	Substitution - Missense	Kidney
COSM76391	c.1511C>G	p.S504C	Substitution - Missense	Ovary
COSM1646000	c.2462A>G	p.D821G	Substitution - Missense	Liver
COSM4022082	c.2944G>A	p.A982T	Substitution - Missense	Stomach
COSM4770735	c.2020delA	p.K674fs*73	Deletion - Frameshift	Pleura
COSM1583399	c.2471C>T	p.A824V	Substitution - Missense	Endometrium
COSM3385158	c.3444G>T	p.K1148N	Substitution - Missense	Pancreas
COSM4950840	c.119delT	p.R41fs*21	Deletion - Frameshift	Liver
COSM1241723	c.3281C>G	p.S1094C	Substitution - Missense	Oesophagus
COSM1667915	c.796G>A	p.A266T	Substitution - Missense	Large_intestine
COSM4478477	c.2240C>T	p.T747I	Substitution - Missense	Skin
COSM5652270	c.1450C>T	p.R484W	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM2182691	c.1574C>T	p.T525I	Substitution - Missense	Large_intestine
COSM4725208	c.3587A>G	p.N1196S	Substitution - Missense	Large_intestine
COSM1646001	c.1226T>C	p.L409P	Substitution - Missense	Lung
COSM1651167	c.3138C>T	p.D1046D	Substitution - coding silent	Oesophagus
COSM3930388	c.3708C>T	p.F1236F	Substitution - coding silent	Urinary_tract
COSM6009473	c.3289G>C	p.D1097H	Substitution - Missense	Skin
COSM3473505	c.8C>T	p.S3F	Substitution - Missense	Skin
COSM5993303	c.3658C>T	p.R1220C	Substitution - Missense	Prostate
COSM3360314	c.1745G>A	p.C582Y	Substitution - Missense	Kidney
COSM3473527	c.1583C>T	p.S528L	Substitution - Missense	Skin
COSM3473533	c.1906C>T	p.R636W	Substitution - Missense	Skin
COSM5572910	c.448-2A>T	p.?	Unknown	Prostate
COSM1333889	c.1028G>A	p.R343H	Substitution - Missense	Large_intestine
COSM2182782	c.3372G>A	p.S1124S	Substitution - coding silent	Large_intestine
COSM1646002	c.942C>T	p.C314C	Substitution - coding silent	Lung
COSM2182691	c.1574C>T	p.T525I	Substitution - Missense	Large_intestine
COSM1626405	c.1180C>T	p.R394W	Substitution - Missense	Liver
COSM4447108	c.1580+3G>C	p.?	Unknown	Skin
COSM1583422	c.3801C>T	p.Y1267Y	Substitution - coding silent	Endometrium
COSM1295005	c.2086G>C	p.E696Q	Substitution - Missense	Urinary_tract
COSM3473513	c.347C>T	p.S116F	Substitution - Missense	Skin
COSM4387049	c.1322C>G	p.T441S	Substitution - Missense	Lung
COSM4538335	c.2535G>A	p.E845E	Substitution - coding silent	Skin
COSM1333893	c.2046C>T	p.I682I	Substitution - coding silent	Large_intestine
COSM3473524	c.1479C>T	p.S493S	Substitution - coding silent	Skin
COSM1626413	c.3638A>T	p.K1213M	Substitution - Missense	Liver
COSM5881513	c.166C>A	p.Q56K	Substitution - Missense	Large_intestine
COSM5887638	c.847G>A	p.E283K	Substitution - Missense	Upper_aerodigestive_tract
COSM1333900	c.3766C>T	p.R1256W	Substitution - Missense	Central_nervous_system
COSM4022077	c.2446G>T	p.G816C	Substitution - Missense	Stomach
COSM2182760	c.2844delC	p.P950fs*16	Deletion - Frameshift	Large_intestine
COSM1472590	c.3176G>A	p.R1059Q	Substitution - Missense	Breast
COSM1333881	c.214G>T	p.E72*	Substitution - Nonsense	Large_intestine
COSM1583398	c.2604A>T	p.E868D	Substitution - Missense	Endometrium
COSM5473138	c.2794C>T	p.R932W	Substitution - Missense	Large_intestine
COSM5704917	c.2468T>C	p.I823T	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM139315	c.3706T>C	p.F1236L	Substitution - Missense	Skin
COSM3984205	c.3826G>A	p.E1276K	Substitution - Missense	Kidney
COSM3369269	c.3610G>A	p.E1204K	Substitution - Missense	Large_intestine
COSM2182740	c.2403A>G	p.L801L	Substitution - coding silent	Large_intestine
COSM4515744	c.1287_1288CC>TT	p.P430S	Substitution - Missense	Skin
COSM1583426	c.3536C>T	p.S1179L	Substitution - Missense	Endometrium
COSM5793283	c.2330+8G>C	p.?	Unknown	Breast
COSM4725182	c.198A>G	p.T66T	Substitution - coding silent	Liver
COSM4841464	c.3427G>T	p.D1143Y	Substitution - Missense	Cervix
COSM1600766	c.2503A>G	p.K835E	Substitution - Missense	Liver
COSM4576244	c.3510A>G	p.K1170K	Substitution - coding silent	Bone
COSM1583408	c.56C>T	p.S19F	Substitution - Missense	Endometrium
COSM4022061	c.869A>C	p.K290T	Substitution - Missense	Stomach
COSM5968488	c.839T>A	p.I280N	Substitution - Missense	Genital_tract
COSM4725182	c.198A>G	p.T66T	Substitution - coding silent	Liver
COSM1583400	c.2193C>T	p.C731C	Substitution - coding silent	Endometrium
COSM1744345	c.1753C>G	p.R585G	Substitution - Missense	Biliary_tract
COSM1583423	c.3727C>T	p.R1243C	Substitution - Missense	Endometrium
COSM2182754	c.2621delC	p.C876fs*8	Deletion - Frameshift	Biliary_tract
COSM5754190	c.1871A>G	p.H624R	Substitution - Missense	Large_intestine
COSM5993303	c.3658C>T	p.R1220C	Substitution - Missense	Prostate
COSM26550	c.370G>C	p.E124Q	Substitution - Missense	Upper_aerodigestive_tract
COSM2182721	c.2086G>A	p.E696K	Substitution - Missense	Breast
COSM1639493	c.1315A>G	p.T439A	Substitution - Missense	Stomach
COSM4142605	c.3196T>C	p.S1066P	Substitution - Missense	Thyroid
COSM5444175	c.561G>T	p.Q187H	Substitution - Missense	Oesophagus
COSM1333900	c.3766C>T	p.R1256W	Substitution - Missense	Liver
COSM1626417	c.3670-8A>T	p.?	Unknown	Liver
COSM1320009	c.615G>C	p.L205L	Substitution - coding silent	Ovary
COSM1645999	c.3565G>C	p.E1189Q	Substitution - Missense	Lung
COSM3665399	c.3291_3291+1insT	p.D1098fs*1	Unknown	Liver
COSM78474	c.911A>G	p.Y304C	Substitution - Missense	Ovary
COSM1333898	c.3581G>A	p.R1194H	Substitution - Missense	Large_intestine
COSM3979777	c.447+9G>C	p.?	Unknown	Ovary
COSM1295003	c.1675C>T	p.P559S	Substitution - Missense	Urinary_tract
COSM3473509	c.333C>T	p.S111S	Substitution - coding silent	Skin
COSM3976111	c.399C>T	p.L133L	Substitution - coding silent	Lung
COSM1583425	c.3580C>T	p.R1194C	Substitution - Missense	Endometrium
COSM4953747	c.679G>A	p.G227R	Substitution - Missense	Liver
COSM5568928	c.2633C>T	p.S878F	Substitution - Missense	Prostate
COSM1333900	c.3766C>T	p.R1256W	Substitution - Missense	Liver
COSM3740649	c.3865C>T	p.R1289C	Substitution - Missense	Liver
COSM5006800	c.791T>G	p.V264G	Substitution - Missense	Large_intestine
COSM1583403	c.1493C>A	p.S498Y	Substitution - Missense	Breast
COSM4022090	c.3728G>A	p.R1243H	Substitution - Missense	Stomach
COSM1333902	c.3767G>A	p.R1256Q	Substitution - Missense	Large_intestine
COSM1600774	c.3759-18_3759-2del17	p.?	Unknown	Liver
COSM4762565	c.1181G>A	p.R394Q	Substitution - Missense	Stomach
COSM3740646	c.2738A>C	p.D913A	Substitution - Missense	Liver
COSM4478754	c.2262C>T	p.T754T	Substitution - coding silent	Skin
COSM1600764	c.297C>T	p.F99F	Substitution - coding silent	Liver
COSM3677269	c.3538A>C	p.T1180P	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM6009466	c.434C>T	p.P145L	Substitution - Missense	Skin
COSM4140826	c.2587G>A	p.V863M	Substitution - Missense	Kidney
COSM4762576	c.2885C>G	p.S962*	Substitution - Nonsense	Liver
COSM3369269	c.3610G>A	p.E1204K	Substitution - Missense	Thyroid
COSM5786438	c.3594C>A	p.R1198R	Substitution - coding silent	Breast
COSM4725182	c.198A>G	p.T66T	Substitution - coding silent	Large_intestine
COSM1600768	c.2560T>G	p.F854V	Substitution - Missense	Liver
COSM1472589	c.2536G>T	p.G846C	Substitution - Missense	Breast
COSM1583401	c.1938C>T	p.F646F	Substitution - coding silent	Endometrium
COSM1726277	c.2609A>G	p.Y870C	Substitution - Missense	Liver
COSM4945207	c.1712T>G	p.L571R	Substitution - Missense	Testis
COSM5572838	c.2337T>A	p.Y779*	Substitution - Nonsense	Prostate
COSM3376708	c.2500G>T	p.G834C	Substitution - Missense	Pancreas
COSM1747727	c.2527G>A	p.D843N	Substitution - Missense	Urinary_tract
COSM4725190	c.699_700insT	p.D235fs*1	Insertion - Frameshift	Large_intestine
COSM3788655	c.2018A>G	p.Y673C	Substitution - Missense	Urinary_tract
COSM5557844	c.699A>C	p.K233N	Substitution - Missense	Prostate
COSM1747727	c.2527G>A	p.D843N	Substitution - Missense	Urinary_tract
COSM4456172	c.486_487AG>TA	p.Q162_D163>HN	Complex - compound substitution	Skin
COSM1472585	c.2288C>G	p.S763C	Substitution - Missense	Breast
COSM5436904	c.583G>A	p.D195N	Substitution - Missense	Oesophagus
COSM1667915	c.796G>A	p.A266T	Substitution - Missense	Large_intestine
COSM1600770	c.2779A>C	p.T927P	Substitution - Missense	Liver
COSM4725201	c.1784G>A	p.R595Q	Substitution - Missense	Large_intestine
COSM4834573	c.1753C>A	p.R585R	Substitution - coding silent	Cervix
COSM5353077	c.3569G>A	p.S1190N	Substitution - Missense	Large_intestine
COSM4022071	c.1853A>G	p.N618S	Substitution - Missense	Stomach
COSM5052541	c.1028_1029insC	p.M345fs*13	Insertion - Frameshift	Stomach
COSM5735623	c.1001A>G	p.E334G	Substitution - Missense	Small_intestine
COSM3385155	c.1783C>T	p.R595W	Substitution - Missense	Pancreas
COSM4920514	c.810T>C	p.D270D	Substitution - coding silent	Liver
COSM5506622	c.3291T>A	p.D1097E	Substitution - Missense	Biliary_tract
COSM1472590	c.3176G>A	p.R1059Q	Substitution - Missense	Large_intestine
COSM5908013	c.1425-8C>T	p.?	Unknown	Skin
COSM5782015	c.636T>G	p.T212T	Substitution - coding silent	Breast
COSM1583424	c.3609C>T	p.G1203G	Substitution - coding silent	Stomach
COSM5347833	c.1424+4_1424+7delAGTG	p.?	Unknown	Liver
COSM1583401	c.1938C>T	p.F646F	Substitution - coding silent	Breast
COSM4965512	c.1483C>G	p.R495G	Substitution - Missense	Pancreas
COSM4953747	c.679G>A	p.G227R	Substitution - Missense	Liver
COSM3710310	c.700T>C	p.F234L	Substitution - Missense	Upper_aerodigestive_tract
COSM5968806	c.3555G>A	p.V1185V	Substitution - coding silent	Upper_aerodigestive_tract
COSM5377564	c.9C>T	p.S3S	Substitution - coding silent	Skin
COSM3801776	c.3319G>C	p.E1107Q	Substitution - Missense	Breast
COSM5377568	c.2212A>T	p.K738*	Substitution - Nonsense	Skin
COSM4022053	c.305A>C	p.K102T	Substitution - Missense	Stomach
COSM4725194	c.748G>A	p.D250N	Substitution - Missense	Large_intestine
COSM5010606	c.1454A>G	p.K485R	Substitution - Missense	Kidney
COSM4022079	c.2783G>A	p.R928Q	Substitution - Missense	Stomach
COSM1583406	c.243C>A	p.L81L	Substitution - coding silent	Endometrium
COSM5572841	c.2336A>T	p.Y779F	Substitution - Missense	Prostate
COSM4390187	c.729G>A	p.S243S	Substitution - coding silent	Urinary_tract
COSM5353077	c.3569G>A	p.S1190N	Substitution - Missense	Large_intestine
COSM2182760	c.2844delC	p.P950fs*16	Deletion - Frameshift	Large_intestine
COSM4608216	c.307C>A	p.L103M	Substitution - Missense	Adrenal_gland
COSM1600768	c.2560T>G	p.F854V	Substitution - Missense	Breast
COSM4944434	c.3326A>T	p.E1109V	Substitution - Missense	Liver
COSM4408213	c.3331G>A	p.E1111K	Substitution - Missense	Pancreas
COSM3801772	c.1454A>C	p.K485T	Substitution - Missense	Breast
COSM1667918	c.3709G>A	p.V1237M	Substitution - Missense	Ovary
COSM1583428	c.2901C>A	p.G967G	Substitution - coding silent	Endometrium

> Text Mining based Variations

[ TOP ]

PMID	Variation	Cancer	Evidence
26824986	Mutation	Malignant Pleural Mesothelioma	The frequent SETDB1 inactivating mutations suggest there could be new diagnostic or therapeutic options for MPM.

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Post-translational modification (PTM)

> Post-translational modification (PTM)

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Filter By:

Uniprot ID	Position	Amino Acid	Description	Upstream Enzyme	Affected By Mutation	Amino Acid Sequence Variant
Q15047	117	S	Phosphoserine	-	No	None detected
Q15047	120	T	Phosphothreonine	-	No	None detected
Q15047	976	T	Phosphothreonine	NLK	No	None detected
Q15047	1025	S	Phosphoserine	-	No	None detected
Q15047	1066	S	Phosphoserine	-	No	None detected
Q15047	1170	K	N6,N6,N6-trimethyllysine	-	No	None detected
Q15047	1170	K	N6,N6-dimethyllysine	-	No	None detected
Q15047	1178	K	N6,N6,N6-trimethyllysine	-	No	None detected
Q15047	1178	K	N6,N6-dimethyllysine	-	No	None detected

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Expression analysis in primary tumor tissue from TCGA > Expression level in cancer cell line from CCLE > Expression level in human normal tissue from HPA > Text mining based expression change

> The Cancer Genome Atlas (TCGA)

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Differential expression analysis for cancers with more than 10 normal samples

Cancer	Full Name	# N	# T	Median (N)	Median (T)	LogFC	Adj. P	Status
BLCA	Bladder urothelial carcinoma	19	408	5.062	5.628	0.545	9.53e-05	NS
BRCA	Breast invasive carcinoma	112	1100	5.53	6.012	0.509	2.97e-24	NS
CESC	Cervical and endocervical cancers	3	306	5.346	5.59	NA	NA	NA
COAD	Colon adenocarcinoma	41	459	5.024	5.366	0.386	1.1e-10	NS
ESCA	Esophageal carcinoma	11	185	5.21	5.532	0.379	0.0326	NS
GBM	Glioblastoma multiforme	5	166	4.697	5.531	NA	NA	NA
HNSC	Head and Neck squamous cell carcinoma	44	522	4.974	5.094	0.209	0.00186	NS
KIRC	Kidney renal clear cell carcinoma	72	534	5.077	5.609	0.527	1.16e-30	NS
KIRP	Kidney renal papillary cell carcinoma	32	291	5.075	5.348	0.272	2.77e-05	NS
LAML	Acute Myeloid Leukemia	0	173	NA	6.834	NA	NA	NA
LGG	Brain Lower Grade Glioma	0	530	NA	5.745	NA	NA	NA
LIHC	Liver hepatocellular carcinoma	50	373	4.091	4.989	0.937	6.62e-24	Over
LUAD	Lung adenocarcinoma	59	517	5.227	5.712	0.627	9.08e-18	Over
LUSC	Lung squamous cell carcinoma	51	501	5.212	5.548	0.437	3.69e-09	NS
OV	Ovarian serous cystadenocarcinoma	0	307	NA	6.302	NA	NA	NA
PAAD	Pancreatic adenocarcinoma	4	179	5.338	5.183	NA	NA	NA
PCPG	Pheochromocytoma and Paraganglioma	3	184	5.024	4.847	NA	NA	NA
PRAD	Prostate adenocarcinoma	52	498	5.128	5.23	0.158	0.000602	NS
READ	Rectum adenocarcinoma	10	167	4.822	5.422	0.63	3.95e-06	Over
SARC	Sarcoma	2	263	4.762	5.322	NA	NA	NA
SKCM	Skin Cutaneous Melanoma	1	472	5.768	5.854	NA	NA	NA
STAD	Stomach adenocarcinoma	35	415	4.937	5.428	0.516	9.59e-11	NS
TGCT	Testicular Germ Cell Tumors	0	156	NA	6.646	NA	NA	NA
THCA	Thyroid carcinoma	59	509	5.366	5.358	0.053	0.125	NS
THYM	Thymoma	2	120	5.651	5.844	NA	NA	NA
UCEC	Uterine Corpus Endometrial Carcinoma	35	546	5.543	6.028	0.565	2.34e-09	NS

> Cancer Cell Line Encyclopedia (CCLE)

[ TOP ]

Tissue	Cell Line	Expression Level (Microarray)
Autonomic ganglia	CHP126	8.3
Autonomic ganglia	CHP212	7.1
Autonomic ganglia	IMR32	7.7
Autonomic ganglia	KELLY	7.6
Autonomic ganglia	KPNRTBM1	7.4
Autonomic ganglia	KPNSI9S	7.3
Autonomic ganglia	KPNYN	7.6
Autonomic ganglia	MHHNB11	9
Autonomic ganglia	NB1	7.9
Autonomic ganglia	NH6	6.8
Autonomic ganglia	SHSY5Y	8.4
Autonomic ganglia	SIMA	8
Autonomic ganglia	SKNAS	7.8
Autonomic ganglia	SKNBE2	7.7
Autonomic ganglia	SKNDZ	7.9
Autonomic ganglia	SKNFI	7.3
Autonomic ganglia	SKNSH	6.3
Biliary tract	HUCCT1	6.5
Biliary tract	HUH28	6.6
Biliary tract	SNU1079	6.7
Biliary tract	SNU1196	7.1
Biliary tract	SNU245	7
Biliary tract	SNU308	6.2
Biliary tract	SNU478	6.9
Bone	143B	7.5
Bone	A673	6.9
Bone	CADOES1	6.9
Bone	CAL78	6
Bone	G292CLONEA141B1	6.9
Bone	HOS	8.1
Bone	HS706T	6.4
Bone	HS737T	6.1
Bone	HS819T	5.8
Bone	HS821T	5.9
Bone	HS822T	5.9
Bone	HS863T	6.1
Bone	HS870T	5.7
Bone	HS888T	6.1
Bone	MG63	7
Bone	MHHES1	7.5
Bone	OUMS27	6
Bone	RDES	7.5
Bone	SJSA1	6.3
Bone	SKES1	7
Bone	SKNMC	6.9
Bone	SW1353	5.9
Bone	T173	5.9
Bone	TC71	7
Bone	U2OS	6.6
Breast	AU565	7.5
Breast	BT20	7
Breast	BT474	6.2
Breast	BT483	7.4
Breast	BT549	6.8
Breast	CAL120	6.7
Breast	CAL148	8.1
Breast	CAL51	7
Breast	CAL851	6.1
Breast	CAMA1	7
Breast	DU4475	7.8
Breast	EFM192A	6.9
Breast	EFM19	7.2
Breast	EVSAT	6.9
Breast	HCC1143	6.6
Breast	HCC1187	8.2
Breast	HCC1395	7.4
Breast	HCC1419	6.5
Breast	HCC1428	6.8
Breast	HCC1500	7.2
Breast	HCC1569	6.7
Breast	HCC1599	8
Breast	HCC1806	6.4
Breast	HCC1937	5.4
Breast	HCC1954	6.8
Breast	HCC202	7.4
Breast	HCC2157	7.6
Breast	HCC2218	7.4
Breast	HCC38	6.2
Breast	HCC70	7
Breast	HDQP1	6.7
Breast	HMC18	6.5
Breast	HS274T	5.9
Breast	HS281T	5.9
Breast	HS343T	6.1
Breast	HS578T	6.2
Breast	HS606T	6.1
Breast	HS739T	6.2
Breast	HS742T	5.8
Breast	JIMT1	6.1
Breast	KPL1	7.7
Breast	MCF7	7.8
Breast	MDAMB134VI	7.1
Breast	MDAMB157	6.4
Breast	MDAMB175VII	6.5
Breast	MDAMB231	6.5
Breast	MDAMB361	6.5
Breast	MDAMB415	6
Breast	MDAMB436	7.8
Breast	MDAMB453	7.2
Breast	MDAMB468	7.1
Breast	SKBR3	7.5
Breast	T47D	7
Breast	UACC812	8.1
Breast	UACC893	6.6
Breast	YMB1	7.8
Breast	ZR751	7.5
Breast	ZR7530	7.1
Central nervous system	1321N1	6.6
Central nervous system	42MGBA	5.8
Central nervous system	8MGBA	6.6
Central nervous system	A172	7
Central nervous system	AM38	6.6
Central nervous system	BECKER	6.5
Central nervous system	CAS1	5.8
Central nervous system	CCFSTTG1	6.5
Central nervous system	D283MED	8.1
Central nervous system	D341MED	8.1
Central nervous system	DAOY	6.4
Central nervous system	DBTRG05MG	5.7
Central nervous system	DKMG	5.8
Central nervous system	GAMG	6
Central nervous system	GB1	6.6
Central nervous system	GI1	6.9
Central nervous system	GMS10	6.3
Central nervous system	GOS3	6.4
Central nervous system	H4	6.4
Central nervous system	HS683	6.4
Central nervous system	KALS1	6.2
Central nervous system	KG1C	6.2
Central nervous system	KNS42	7.3
Central nervous system	KNS60	6.7
Central nervous system	KNS81	5.9
Central nervous system	KS1	6.5
Central nervous system	LN18	6.6
Central nervous system	LN229	6.8
Central nervous system	M059K	6.9
Central nervous system	MOGGCCM	6.3
Central nervous system	MOGGUVW	6.4
Central nervous system	NMCG1	5.8
Central nervous system	ONS76	7
Central nervous system	SF126	5.3
Central nervous system	SF295	6.2
Central nervous system	SNB19	6.6
Central nervous system	SNU1105	5.8
Central nervous system	SNU201	6.2
Central nervous system	SNU466	6
Central nervous system	SNU489	6.1
Central nervous system	SNU626	6.2
Central nervous system	SNU738	6.5
Central nervous system	SW1088	6
Central nervous system	SW1783	5.9
Central nervous system	T98G	6.5
Central nervous system	TM31	6.8
Central nervous system	U118MG	5.7
Central nervous system	U138MG	6.1
Central nervous system	U251MG	6.3
Central nervous system	U87MG	6.5
Central nervous system	YH13	6.6
Central nervous system	YKG1	6.7
Endometrium	AN3CA	6.8
Endometrium	COLO684	7.4
Endometrium	EFE184	6.7
Endometrium	EN	7.2
Endometrium	ESS1	6.3
Endometrium	HEC108	6.3
Endometrium	HEC151	6.7
Endometrium	HEC1A	6.4
Endometrium	HEC1B	7.1
Endometrium	HEC251	6.6
Endometrium	HEC265	6.2
Endometrium	HEC50B	6.5
Endometrium	HEC59	6.5
Endometrium	HEC6	6.3
Endometrium	ISHIKAWAHERAKLIO02ER	6.4
Endometrium	JHUEM1	6.4
Endometrium	JHUEM2	6.6
Endometrium	JHUEM3	6.5
Endometrium	KLE	6.8
Endometrium	MFE280	7.3
Endometrium	MFE296	7
Endometrium	MFE319	6.2
Endometrium	RL952	7.1
Endometrium	SNGM	6.6
Endometrium	SNU1077	6.9
Endometrium	SNU685	7
Endometrium	TEN	6.7
Haematopoietic and lymphoid	697	7.4
Haematopoietic and lymphoid	A3KAW	7
Haematopoietic and lymphoid	A4FUK	6.9
Haematopoietic and lymphoid	ALLSIL	7.6
Haematopoietic and lymphoid	AML193	7.5
Haematopoietic and lymphoid	AMO1	9.4
Haematopoietic and lymphoid	BCP1	7
Haematopoietic and lymphoid	BDCM	7
Haematopoietic and lymphoid	BL41	8.5
Haematopoietic and lymphoid	BL70	8.2
Haematopoietic and lymphoid	BV173	8.9
Haematopoietic and lymphoid	CA46	8.5
Haematopoietic and lymphoid	CI1	7.4
Haematopoietic and lymphoid	CMK115	7.3
Haematopoietic and lymphoid	CMK86	7.5
Haematopoietic and lymphoid	CMK	7.6
Haematopoietic and lymphoid	CMLT1	7.2
Haematopoietic and lymphoid	COLO775	7.5
Haematopoietic and lymphoid	DAUDI	7.5
Haematopoietic and lymphoid	DB	7.5
Haematopoietic and lymphoid	DEL	6.6
Haematopoietic and lymphoid	DND41	7.7
Haematopoietic and lymphoid	DOHH2	7.3
Haematopoietic and lymphoid	EB1	7.3
Haematopoietic and lymphoid	EB2	7.8
Haematopoietic and lymphoid	EHEB	7.3
Haematopoietic and lymphoid	EJM	7.1
Haematopoietic and lymphoid	EM2	7.3
Haematopoietic and lymphoid	EOL1	7.9
Haematopoietic and lymphoid	F36P	7.6
Haematopoietic and lymphoid	GA10	8.5
Haematopoietic and lymphoid	GDM1	8
Haematopoietic and lymphoid	GRANTA519	7.8
Haematopoietic and lymphoid	HDLM2	6.6
Haematopoietic and lymphoid	HDMYZ	6.6
Haematopoietic and lymphoid	HEL9217	7.1
Haematopoietic and lymphoid	HEL	7.4
Haematopoietic and lymphoid	HH	7
Haematopoietic and lymphoid	HL60	7.7
Haematopoietic and lymphoid	HPBALL	7.8
Haematopoietic and lymphoid	HS604T	5.7
Haematopoietic and lymphoid	HS611T	7.2
Haematopoietic and lymphoid	HS616T	6.1
Haematopoietic and lymphoid	HS751T	5.6
Haematopoietic and lymphoid	HT	7.5
Haematopoietic and lymphoid	HTK	7.9
Haematopoietic and lymphoid	HUNS1	7.1
Haematopoietic and lymphoid	HUT102	6.8
Haematopoietic and lymphoid	HUT78	7.1
Haematopoietic and lymphoid	JEKO1	8.1
Haematopoietic and lymphoid	JK1	7.8
Haematopoietic and lymphoid	JM1	8.4
Haematopoietic and lymphoid	JURKAT	7.3
Haematopoietic and lymphoid	JURLMK1	7.6
Haematopoietic and lymphoid	JVM2	6.8
Haematopoietic and lymphoid	JVM3	7.1
Haematopoietic and lymphoid	K562	7.3
Haematopoietic and lymphoid	KARPAS299	7.7
Haematopoietic and lymphoid	KARPAS422	7.3
Haematopoietic and lymphoid	KARPAS620	7.8
Haematopoietic and lymphoid	KASUMI1	6.5
Haematopoietic and lymphoid	KASUMI2	7.4
Haematopoietic and lymphoid	KASUMI6	7.4
Haematopoietic and lymphoid	KCL22	7.5
Haematopoietic and lymphoid	KE37	7.2
Haematopoietic and lymphoid	KE97	6.8
Haematopoietic and lymphoid	KG1	7.4
Haematopoietic and lymphoid	KHM1B	8.7
Haematopoietic and lymphoid	KIJK	7.5
Haematopoietic and lymphoid	KMH2	7.2
Haematopoietic and lymphoid	KMM1	7.6
Haematopoietic and lymphoid	KMS11	8.3
Haematopoietic and lymphoid	KMS12BM	7.6
Haematopoietic and lymphoid	KMS18	7.2
Haematopoietic and lymphoid	KMS20	8.3
Haematopoietic and lymphoid	KMS21BM	7.9
Haematopoietic and lymphoid	KMS26	6.9
Haematopoietic and lymphoid	KMS27	7.3
Haematopoietic and lymphoid	KMS28BM	7.5
Haematopoietic and lymphoid	KMS34	7.1
Haematopoietic and lymphoid	KO52	7.5
Haematopoietic and lymphoid	KOPN8	7.9
Haematopoietic and lymphoid	KU812	7.5
Haematopoietic and lymphoid	KYO1	8.1
Haematopoietic and lymphoid	L1236	6.7
Haematopoietic and lymphoid	L363	7.5
Haematopoietic and lymphoid	L428	6.3
Haematopoietic and lymphoid	L540	7.1
Haematopoietic and lymphoid	LAMA84	7.8
Haematopoietic and lymphoid	LOUCY	7.8
Haematopoietic and lymphoid	LP1	8.4
Haematopoietic and lymphoid	M07E	7.7
Haematopoietic and lymphoid	MC116	7.7
Haematopoietic and lymphoid	ME1	7.8
Haematopoietic and lymphoid	MEC1	6.9
Haematopoietic and lymphoid	MEC2	6.9
Haematopoietic and lymphoid	MEG01	6.7
Haematopoietic and lymphoid	MHHCALL2	7.4
Haematopoietic and lymphoid	MHHCALL3	7.7
Haematopoietic and lymphoid	MHHCALL4	7.9
Haematopoietic and lymphoid	MINO	7.2
Haematopoietic and lymphoid	MJ	6.5
Haematopoietic and lymphoid	MM1S	7.4
Haematopoietic and lymphoid	MOLM13	7.5
Haematopoietic and lymphoid	MOLM16	7.7
Haematopoietic and lymphoid	MOLM6	8.3
Haematopoietic and lymphoid	MOLP2	7.2
Haematopoietic and lymphoid	MOLP8	7.8
Haematopoietic and lymphoid	MOLT13	7.5
Haematopoietic and lymphoid	MOLT16	7.4
Haematopoietic and lymphoid	MOLT4	7.7
Haematopoietic and lymphoid	MONOMAC1	7.5
Haematopoietic and lymphoid	MONOMAC6	7.6
Haematopoietic and lymphoid	MOTN1	7.3
Haematopoietic and lymphoid	MUTZ5	7.6
Haematopoietic and lymphoid	MV411	7.9
Haematopoietic and lymphoid	NALM19	7.9
Haematopoietic and lymphoid	NALM1	7.9
Haematopoietic and lymphoid	NALM6	7.8
Haematopoietic and lymphoid	NAMALWA	7.5
Haematopoietic and lymphoid	NB4	7.1
Haematopoietic and lymphoid	NCIH929	7.8
Haematopoietic and lymphoid	NCO2	7.3
Haematopoietic and lymphoid	NOMO1	7.8
Haematopoietic and lymphoid	NUDHL1	8
Haematopoietic and lymphoid	NUDUL1	8
Haematopoietic and lymphoid	OCIAML2	8.3
Haematopoietic and lymphoid	OCIAML3	8.5
Haematopoietic and lymphoid	OCIAML5	8.4
Haematopoietic and lymphoid	OCILY10	7
Haematopoietic and lymphoid	OCILY19	7.6
Haematopoietic and lymphoid	OCILY3	7.1
Haematopoietic and lymphoid	OCIM1	7.8
Haematopoietic and lymphoid	OPM2	8.2
Haematopoietic and lymphoid	P12ICHIKAWA	7.7
Haematopoietic and lymphoid	P31FUJ	7.6
Haematopoietic and lymphoid	P3HR1	7.1
Haematopoietic and lymphoid	PCM6	7.4
Haematopoietic and lymphoid	PEER	7.4
Haematopoietic and lymphoid	PF382	7.7
Haematopoietic and lymphoid	PFEIFFER	6.6
Haematopoietic and lymphoid	PL21	7.8
Haematopoietic and lymphoid	RAJI	7.3
Haematopoietic and lymphoid	RCHACV	7.6
Haematopoietic and lymphoid	REC1	7.6
Haematopoietic and lymphoid	REH	7.5
Haematopoietic and lymphoid	RI1	7.1
Haematopoietic and lymphoid	RL	7.3
Haematopoietic and lymphoid	RPMI8226	7.1
Haematopoietic and lymphoid	RPMI8402	7.5
Haematopoietic and lymphoid	RS411	7.4
Haematopoietic and lymphoid	SEM	7.5
Haematopoietic and lymphoid	SET2	7.2
Haematopoietic and lymphoid	SIGM5	7.9
Haematopoietic and lymphoid	SKM1	8
Haematopoietic and lymphoid	SKMM2	7
Haematopoietic and lymphoid	SR786	7.8
Haematopoietic and lymphoid	ST486	8.3
Haematopoietic and lymphoid	SUDHL10	8.6
Haematopoietic and lymphoid	SUDHL1	7.4
Haematopoietic and lymphoid	SUDHL4	7.7
Haematopoietic and lymphoid	SUDHL5	7.4
Haematopoietic and lymphoid	SUDHL6	7.7
Haematopoietic and lymphoid	SUDHL8	7.8
Haematopoietic and lymphoid	SUPB15	7.6
Haematopoietic and lymphoid	SUPHD1	6.9
Haematopoietic and lymphoid	SUPM2	6.5
Haematopoietic and lymphoid	SUPT11	7.2
Haematopoietic and lymphoid	SUPT1	7.4
Haematopoietic and lymphoid	TALL1	7.8
Haematopoietic and lymphoid	TF1	6.7
Haematopoietic and lymphoid	THP1	8.1
Haematopoietic and lymphoid	TO175T	6.2
Haematopoietic and lymphoid	TOLEDO	8
Haematopoietic and lymphoid	U266B1	7.5
Haematopoietic and lymphoid	U937	7.8
Haematopoietic and lymphoid	UT7	7.8
Haematopoietic and lymphoid	WSUDLCL2	7.5
Kidney	769P	6.5
Kidney	786O	6.6
Kidney	A498	7.3
Kidney	A704	6.5
Kidney	ACHN	6.3
Kidney	BFTC909	6.9
Kidney	CAKI1	7.3
Kidney	CAKI2	6.8
Kidney	CAL54	6.5
Kidney	KMRC1	6.7
Kidney	KMRC20	6.4
Kidney	KMRC2	6.7
Kidney	KMRC3	6.4
Kidney	OSRC2	6.1
Kidney	RCC10RGB	6.5
Kidney	SNU1272	6.8
Kidney	SNU349	5.7
Kidney	TUHR10TKB	6.4
Kidney	TUHR14TKB	6.9
Kidney	TUHR4TKB	6.7
Kidney	VMRCRCW	6.9
Kidney	VMRCRCZ	6.6
Large intestine	C2BBE1	6.6
Large intestine	CCK81	6.9
Large intestine	CL11	6.3
Large intestine	CL14	7.2
Large intestine	CL34	6.6
Large intestine	CL40	6.8
Large intestine	COLO205	6.7
Large intestine	COLO320	7.6
Large intestine	COLO678	8
Large intestine	CW2	6.8
Large intestine	DLD1	6.5
Large intestine	GP2D	7
Large intestine	HCC56	7.2
Large intestine	HCT116	6.8
Large intestine	HCT15	7
Large intestine	HS675T	6.1
Large intestine	HS698T	6.1
Large intestine	HT115	7
Large intestine	HT29	6.9
Large intestine	HT55	6.6
Large intestine	KM12	6.9
Large intestine	LOVO	6.5
Large intestine	LS1034	6.9
Large intestine	LS123	6.7
Large intestine	LS180	6.7
Large intestine	LS411N	6.7
Large intestine	LS513	6.5
Large intestine	MDST8	6.1
Large intestine	NCIH508	6.8
Large intestine	NCIH716	6.3
Large intestine	NCIH747	6.7
Large intestine	OUMS23	7
Large intestine	RCM1	6.7
Large intestine	RKO	6.4
Large intestine	SKCO1	7.1
Large intestine	SNU1040	6.8
Large intestine	SNU1197	6.3
Large intestine	SNU175	6.9
Large intestine	SNU283	6.6
Large intestine	SNU407	8.1
Large intestine	SNU503	7.3
Large intestine	SNU61	7
Large intestine	SNU81	7.3
Large intestine	SNUC1	7.1
Large intestine	SNUC2A	6.5
Large intestine	SNUC4	6.8
Large intestine	SNUC5	6.7
Large intestine	SW1116	6.1
Large intestine	SW1417	6.4
Large intestine	SW1463	6.6
Large intestine	SW403	7.2
Large intestine	SW480	5.7
Large intestine	SW48	7
Large intestine	SW620	6.9
Large intestine	SW837	6.1
Large intestine	SW948	6.5
Large intestine	T84	6.9
Liver	ALEXANDERCELLS	6.2
Liver	C3A	6.5
Liver	HEP3B217	7.1
Liver	HEPG2	6.5
Liver	HLE	5.8
Liver	HLF	6.4
Liver	HUH1	7.4
Liver	HUH6	7
Liver	HUH7	6.2
Liver	JHH1	6.8
Liver	JHH2	6.2
Liver	JHH4	6.9
Liver	JHH5	7.2
Liver	JHH6	6
Liver	JHH7	7
Liver	LI7	6.5
Liver	PLCPRF5	6.5
Liver	SKHEP1	5.9
Liver	SNU182	6.9
Liver	SNU387	6.4
Liver	SNU398	7
Liver	SNU423	6.2
Liver	SNU449	6.2
Liver	SNU475	7.5
Liver	SNU761	7.1
Liver	SNU878	6
Liver	SNU886	6.2
Lung	A549	6.2
Lung	ABC1	6.9
Lung	BEN	6.9
Lung	CAL12T	6.5
Lung	CALU1	6.3
Lung	CALU3	6.4
Lung	CALU6	7
Lung	CHAGOK1	7.1
Lung	COLO668	6.6
Lung	COLO699	7
Lung	CORL105	6.5
Lung	CORL23	6.6
Lung	CORL24	6.7
Lung	CORL279	6.9
Lung	CORL311	7.3
Lung	CORL47	6.4
Lung	CORL51	6.8
Lung	CORL88	6.8
Lung	CORL95	6.3
Lung	CPCN	6.9
Lung	DMS114	7.8
Lung	DMS153	7.1
Lung	DMS273	10.3
Lung	DMS454	6.6
Lung	DMS53	6.8
Lung	DMS79	6.6
Lung	DV90	6.3
Lung	EBC1	6.5
Lung	EPLC272H	5.7
Lung	HARA	7
Lung	HCC1171	7.5
Lung	HCC1195	7.1
Lung	HCC15	7.2
Lung	HCC2279	5.7
Lung	HCC2935	6.5
Lung	HCC33	7.7
Lung	HCC366	6.3
Lung	HCC4006	6.6
Lung	HCC44	6.6
Lung	HCC78	7
Lung	HCC827	6.4
Lung	HCC95	5.8
Lung	HLC1	7
Lung	HLFA	5.9
Lung	HS229T	5.9
Lung	HS618T	6.1
Lung	IALM	7
Lung	KNS62	6.3
Lung	LC1F	7
Lung	LC1SQSF	6.3
Lung	LCLC103H	6.8
Lung	LCLC97TM1	7.5
Lung	LK2	8.4
Lung	LOUNH91	6.6
Lung	LU65	7.1
Lung	LU99	6.8
Lung	LUDLU1	7.1
Lung	LXF289	7.2
Lung	MORCPR	7.4
Lung	NCIH1048	7.1
Lung	NCIH1092	6.7
Lung	NCIH1105	7.3
Lung	NCIH1155	6.1
Lung	NCIH1184	7.4
Lung	NCIH1299	6.8
Lung	NCIH1339	7.4
Lung	NCIH1341	7
Lung	NCIH1355	6.7
Lung	NCIH1373	6.6
Lung	NCIH1385	6.8
Lung	NCIH1395	8.3
Lung	NCIH1435	6.6
Lung	NCIH1436	6.4
Lung	NCIH1437	8.3
Lung	NCIH146	6.6
Lung	NCIH1563	6.5
Lung	NCIH1568	7.9
Lung	NCIH1573	6.6
Lung	NCIH1581	7.6
Lung	NCIH1618	7.1
Lung	NCIH1623	8.5
Lung	NCIH1648	6.3
Lung	NCIH1650	6.6
Lung	NCIH1651	7
Lung	NCIH1666	7.4
Lung	NCIH1693	6.1
Lung	NCIH1694	7.2
Lung	NCIH1703	6.8
Lung	NCIH1734	7.2
Lung	NCIH1755	6.6
Lung	NCIH1781	7.1
Lung	NCIH1792	6.5
Lung	NCIH1793	6.3
Lung	NCIH1836	7
Lung	NCIH1838	6.5
Lung	NCIH1869	7.1
Lung	NCIH1876	7.9
Lung	NCIH1915	6.6
Lung	NCIH1930	6.6
Lung	NCIH1944	7
Lung	NCIH1963	7.5
Lung	NCIH196	6.7
Lung	NCIH1975	6.7
Lung	NCIH2009	6.7
Lung	NCIH2023	6.6
Lung	NCIH2029	6.7
Lung	NCIH2030	6.3
Lung	NCIH2066	7.3
Lung	NCIH2081	7
Lung	NCIH2085	6.9
Lung	NCIH2087	7.4
Lung	NCIH209	7.4
Lung	NCIH2106	7.7
Lung	NCIH2110	7
Lung	NCIH211	7.1
Lung	NCIH2122	7.4
Lung	NCIH2126	7.6
Lung	NCIH2141	7.5
Lung	NCIH2170	7.2
Lung	NCIH2171	6.7
Lung	NCIH2172	6.4
Lung	NCIH2196	7
Lung	NCIH2227	7.4
Lung	NCIH2228	6.8
Lung	NCIH226	6.1
Lung	NCIH2286	6.3
Lung	NCIH2291	5.9
Lung	NCIH2342	7.3
Lung	NCIH2347	6.3
Lung	NCIH23	7.1
Lung	NCIH2405	6.2
Lung	NCIH2444	6.5
Lung	NCIH292	6.2
Lung	NCIH322	6.3
Lung	NCIH3255	6.2
Lung	NCIH358	7.1
Lung	NCIH441	6.6
Lung	NCIH446	7.5
Lung	NCIH460	6.7
Lung	NCIH510	6.8
Lung	NCIH520	7.6
Lung	NCIH522	7.2
Lung	NCIH524	6.8
Lung	NCIH526	8.3
Lung	NCIH596	6.4
Lung	NCIH647	6.5
Lung	NCIH650	6.5
Lung	NCIH661	5.7
Lung	NCIH69	7.1
Lung	NCIH727	6.8
Lung	NCIH810	7.8
Lung	NCIH82	7.8
Lung	NCIH838	6.9
Lung	NCIH841	7.4
Lung	NCIH854	6.4
Lung	NCIH889	7
Lung	PC14	6.5
Lung	RERFLCAD1	6.5
Lung	RERFLCAD2	6.2
Lung	RERFLCAI	7
Lung	RERFLCKJ	7.3
Lung	RERFLCMS	6.5
Lung	RERFLCSQ1	6
Lung	SBC5	7.2
Lung	SCLC21H	7.5
Lung	SHP77	8.1
Lung	SKLU1	6
Lung	SKMES1	6.5
Lung	SQ1	6
Lung	SW1271	6
Lung	SW1573	6.3
Lung	SW900	7.1
Lung	VMRCLCD	6.6
Lung	VMRCLCP	6.4
Oesophagus	COLO680N	6.7
Oesophagus	ECGI10	6.9
Oesophagus	KYSE140	6.6
Oesophagus	KYSE150	7.2
Oesophagus	KYSE180	6
Oesophagus	KYSE270	6.4
Oesophagus	KYSE30	7.6
Oesophagus	KYSE410	6.4
Oesophagus	KYSE450	6.9
Oesophagus	KYSE510	7.5
Oesophagus	KYSE520	6.3
Oesophagus	KYSE70	6.5
Oesophagus	OE19	7.1
Oesophagus	OE33	6.3
Oesophagus	TE10	6
Oesophagus	TE11	6.3
Oesophagus	TE14	7.3
Oesophagus	TE15	6.9
Oesophagus	TE1	6.5
Oesophagus	TE4	6.7
Oesophagus	TE5	6.3
Oesophagus	TE6	6.9
Oesophagus	TE8	6.1
Oesophagus	TE9	6.1
Oesophagus	TT	7.1
Ovary	59M	6.4
Ovary	A2780	7.4
Ovary	CAOV3	6.6
Ovary	CAOV4	8.8
Ovary	COLO704	7.5
Ovary	COV318	7.5
Ovary	COV362	7
Ovary	COV434	6.2
Ovary	COV504	7.2
Ovary	COV644	6.4
Ovary	EFO21	7.4
Ovary	EFO27	6.1
Ovary	ES2	6.2
Ovary	FUOV1	7.4
Ovary	HEYA8	6.7
Ovary	HS571T	6
Ovary	IGROV1	6.8
Ovary	JHOC5	6.6
Ovary	JHOM1	6.2
Ovary	JHOM2B	6.8
Ovary	JHOS2	6.9
Ovary	JHOS4	7.4
Ovary	KURAMOCHI	7
Ovary	MCAS	6.9
Ovary	NIHOVCAR3	6.8
Ovary	OAW28	6.4
Ovary	OAW42	6.6
Ovary	OC314	6.5
Ovary	OC316	6.2
Ovary	ONCODG1	7
Ovary	OV56	6.5
Ovary	OV7	6.2
Ovary	OV90	6.6
Ovary	OVCAR4	7.6
Ovary	OVCAR8	6
Ovary	OVISE	6.3
Ovary	OVK18	7.1
Ovary	OVKATE	6.6
Ovary	OVMANA	6.3
Ovary	OVSAHO	7.3
Ovary	OVTOKO	6.3
Ovary	RMGI	6.7
Ovary	RMUGS	7
Ovary	SKOV3	7
Ovary	SNU119	7.8
Ovary	SNU840	6.6
Ovary	SNU8	6.6
Ovary	TOV112D	7.4
Ovary	TOV21G	6.8
Ovary	TYKNU	6.5
Pancreas	ASPC1	7
Pancreas	BXPC3	6.3
Pancreas	CAPAN1	6.7
Pancreas	CAPAN2	7.1
Pancreas	CFPAC1	6.6
Pancreas	DANG	6
Pancreas	HPAC	7.2
Pancreas	HPAFII	6.4
Pancreas	HS766T	6.8
Pancreas	HUPT3	6.4
Pancreas	HUPT4	6.3
Pancreas	KCIMOH1	6.6
Pancreas	KLM1	7.1
Pancreas	KP2	7.1
Pancreas	KP3	6.9
Pancreas	KP4	6.4
Pancreas	L33	7.1
Pancreas	MIAPACA2	7
Pancreas	PANC0203	6.2
Pancreas	PANC0213	6.7
Pancreas	PANC0327	5.6
Pancreas	PANC0403	6.5
Pancreas	PANC0504	6.2
Pancreas	PANC0813	6.8
Pancreas	PANC1005	6.7
Pancreas	PANC1	6.5
Pancreas	PATU8902	6.5
Pancreas	PATU8988S	6.7
Pancreas	PATU8988T	6.7
Pancreas	PK1	6.3
Pancreas	PK45H	6.5
Pancreas	PK59	6.2
Pancreas	PL45	6.4
Pancreas	PSN1	6.9
Pancreas	QGP1	6.8
Pancreas	SNU213	6.1
Pancreas	SNU324	7.5
Pancreas	SNU410	6.4
Pancreas	SU8686	6.1
Pancreas	SUIT2	5.7
Pancreas	SW1990	5.8
Pancreas	T3M4	6.2
Pancreas	TCCPAN2	6.5
Pancreas	YAPC	6.5
Pleura	ACCMESO1	5.5
Pleura	DM3	5.7
Pleura	ISTMES1	6.1
Pleura	ISTMES2	6.4
Pleura	JL1	6.2
Pleura	MPP89	6.3
Pleura	MSTO211H	6.2
Pleura	NCIH2052	5.8
Pleura	NCIH2452	6.4
Pleura	NCIH28	7.1
Prostate	22RV1	7.3
Prostate	DU145	6.9
Prostate	LNCAPCLONEFGC	7.3
Prostate	MDAPCA2B	6.9
Prostate	NCIH660	6.9
Prostate	PC3	6.2
Prostate	VCAP	7
Salivary gland	A253	5.8
Salivary gland	YD15	6.3
Skin	A101D	6.5
Skin	A2058	6.9
Skin	A375	7.8
Skin	C32	6.2
Skin	CHL1	6.8
Skin	CJM	6.1
Skin	COLO679	7.1
Skin	COLO741	6.5
Skin	COLO783	6
Skin	COLO792	5.7
Skin	COLO800	6.8
Skin	COLO818	6.1
Skin	COLO829	6.5
Skin	COLO849	6.8
Skin	G361	6.7
Skin	GRM	6.8
Skin	HMCB	6.8
Skin	HS294T	6.2
Skin	HS600T	6
Skin	HS688AT	6.2
Skin	HS695T	7.3
Skin	HS839T	6.2
Skin	HS852T	6.5
Skin	HS895T	6
Skin	HS934T	5.9
Skin	HS936T	6.7
Skin	HS939T	6.4
Skin	HS940T	6.2
Skin	HS944T	5.8
Skin	HT144	6.8
Skin	IGR1	6.6
Skin	IGR37	6.7
Skin	IGR39	6.1
Skin	IPC298	6.7
Skin	K029AX	6.9
Skin	LOXIMVI	6.5
Skin	MALME3M	6.2
Skin	MDAMB435S	6.9
Skin	MELHO	6.2
Skin	MELJUSO	6.3
Skin	MEWO	6.5
Skin	RPMI7951	6
Skin	RVH421	6.1
Skin	SH4	6.8
Skin	SKMEL1	6.2
Skin	SKMEL24	5.9
Skin	SKMEL28	6.3
Skin	SKMEL2	6.5
Skin	SKMEL30	6.7
Skin	SKMEL31	6.2
Skin	SKMEL3	6.5
Skin	SKMEL5	6.9
Skin	UACC257	6.2
Skin	UACC62	6.2
Skin	WM115	6.1
Skin	WM1799	6.4
Skin	WM2664	6.4
Skin	WM793	6.6
Skin	WM88	6.9
Skin	WM983B	5.7
Small intestine	HUTU80	7.1
Soft tissue	A204	6.7
Soft tissue	G401	6.8
Soft tissue	G402	6.6
Soft tissue	GCT	6.4
Soft tissue	HS729	7.1
Soft tissue	HT1080	6.6
Soft tissue	KYM1	6.4
Soft tissue	MESSA	7.4
Soft tissue	RD	6.6
Soft tissue	RH30	6.1
Soft tissue	RH41	6.7
Soft tissue	RKN	6.2
Soft tissue	S117	6.5
Soft tissue	SJRH30	6.9
Soft tissue	SKLMS1	5.8
Soft tissue	SKUT1	6.7
Soft tissue	TE125T	5.8
Soft tissue	TE159T	6.3
Soft tissue	TE441T	7
Soft tissue	TE617T	7.1
Stomach	2313287	7.1
Stomach	AGS	6.7
Stomach	AZ521	6.6
Stomach	ECC10	6.8
Stomach	ECC12	6.6
Stomach	FU97	7.3
Stomach	GCIY	6.8
Stomach	GSS	7.3
Stomach	GSU	6.9
Stomach	HGC27	7.2
Stomach	HS746T	6.4
Stomach	HUG1N	7
Stomach	IM95	6
Stomach	KATOIII	6.2
Stomach	KE39	6.9
Stomach	LMSU	6.9
Stomach	MKN1	6.6
Stomach	MKN45	7
Stomach	MKN74	6.4
Stomach	MKN7	6.5
Stomach	NCCSTCK140	7.3
Stomach	NCIN87	7
Stomach	NUGC2	7.8
Stomach	NUGC3	6.9
Stomach	NUGC4	6.5
Stomach	OCUM1	7.1
Stomach	RERFGC1B	7.3
Stomach	SH10TC	6.4
Stomach	SNU16	7.3
Stomach	SNU1	6.9
Stomach	SNU216	6.7
Stomach	SNU520	6.7
Stomach	SNU5	6.7
Stomach	SNU601	6.3
Stomach	SNU620	6.5
Stomach	SNU668	6.8
Stomach	SNU719	7.3
Stomach	TGBC11TKB	7.2
Thyroid	8305C	6.3
Thyroid	8505C	5.9
Thyroid	BCPAP	6.9
Thyroid	BHT101	7.8
Thyroid	CAL62	6.5
Thyroid	CGTHW1	6.2
Thyroid	FTC133	5.9
Thyroid	FTC238	6
Thyroid	ML1	6.5
Thyroid	SW579	6.2
Thyroid	TT2609C02	6.2
Thyroid	TT	7.3
Upper aerodigestive tract	BHY	6.5
Upper aerodigestive tract	BICR16	6.3
Upper aerodigestive tract	BICR18	6.4
Upper aerodigestive tract	BICR22	6.2
Upper aerodigestive tract	BICR31	5.8
Upper aerodigestive tract	BICR56	5.8
Upper aerodigestive tract	BICR6	6.1
Upper aerodigestive tract	CAL27	6.2
Upper aerodigestive tract	CAL33	6.6
Upper aerodigestive tract	DETROIT562	6
Upper aerodigestive tract	FADU	7
Upper aerodigestive tract	HS840T	6.3
Upper aerodigestive tract	HSC2	6.2
Upper aerodigestive tract	HSC3	6.3
Upper aerodigestive tract	HSC4	6.8
Upper aerodigestive tract	PECAPJ15	6.1
Upper aerodigestive tract	PECAPJ34CLONEC12	6
Upper aerodigestive tract	PECAPJ41CLONED2	5.6
Upper aerodigestive tract	PECAPJ49	5.6
Upper aerodigestive tract	SCC15	5.9
Upper aerodigestive tract	SCC25	6.3
Upper aerodigestive tract	SCC4	6.3
Upper aerodigestive tract	SCC9	6.7
Upper aerodigestive tract	SNU1076	6
Upper aerodigestive tract	SNU1214	6.7
Upper aerodigestive tract	SNU46	7.1
Upper aerodigestive tract	SNU899	6.5
Upper aerodigestive tract	YD10B	6.8
Upper aerodigestive tract	YD38	6.7
Upper aerodigestive tract	YD8	6.5
Urinary tract	5637	6.4
Urinary tract	639V	6.5
Urinary tract	647V	6.8
Urinary tract	BC3C	6.4
Urinary tract	BFTC905	6.9
Urinary tract	CAL29	6.2
Urinary tract	HS172T	6.1
Urinary tract	HT1197	5.8
Urinary tract	HT1376	7.9
Urinary tract	J82	6.8
Urinary tract	JMSU1	7.3
Urinary tract	KMBC2	6.2
Urinary tract	KU1919	5.9
Urinary tract	RT11284	6.7
Urinary tract	RT112	7
Urinary tract	RT4	6.5
Urinary tract	SCABER	5.8
Urinary tract	SW1710	6.9
Urinary tract	SW780	6.9
Urinary tract	T24	6.2
Urinary tract	TCCSUP	7
Urinary tract	UMUC1	6.5
Urinary tract	UMUC3	6.3
Urinary tract	VMCUB1	7

> The Human Protein Atlas (HPA)

[ TOP ]

Tissue	Expression Level (TPM)
Adipose tissue	11.5
Adrenal gland	10.9
Appendix	20.9
Bone marrow	11.7
Breast	20.2
Cerebral cortex	18.2
Cervix, uterine	19.6
Colon	12.6
Duodenum	12.9
Endometrium	29.7
Epididymis	15.8
Esophagus	11.7
Fallopian tube	24.8
Gallbladder	18.2
Heart muscle	5.4
Kidney	12.5
Liver	5.9
Lung	20.1
Lymph node	23.1
Ovary	23.7
Pancreas	2.5
Parathyroid gland	29.5
Placenta	25.1
Prostate	18.1
Rectum	17.3
Salivary gland	4.5
Seminal vesicle	16.8
Skeletal muscle	4.3
Skin	16.7
Small intestine	14.9
Smooth muscle	24.2
Spleen	27.8
Stomach	12.6
Testis	46.1
Thyroid gland	26
Tonsil	19.3
Urinary bladder	14.4

> Text Mining based Expression

[ TOP ]

PMID	Expression	Cancer	Evidence
26542178	Overexpression	Non-Small Cell Lung Cancer	Univariate followed by multivariate Cox analysis showed that higher levels of BRCA1 and SETDB1 expression were significantly associated with shorter disease-free survival in stage I NSCLC patients.
26481868	Overexpression	Hepatocellular Carcinoma	Up-regulation of SETDB1 was significantly associated with HCC disease progression, cancer aggressiveness, and poorer prognosis of HCC patients.
26471002	Overexpression (copy number gain)	Hepatocellular Carcinoma	We show that in hepatocellular carcinoma (HCC) SETDB1 is overexpressed with moderate copy number gain, and GOF TP53 mutations including R249S associate with this overexpression.
24844570	Overexpression	Hepatocellular Carcinoma	Immunohistochemistry identified high levels of H3K9me3 and ESET proteins in 23 (54.8%) and 29 (69.0%) tumor tissues, respectively.
24658378	Overexpression	Melanoma	Overexpression of EHMT2, SETDB1, and LSD1 was observed in 14 (21%), 38 (57%), and 53 (79%) of the 67 patients, respectively. A significant relationship was observed between overexpression of EHMT2 or SETDB1 and aggressive tumor behavior such as lymph node metastasis and/or distant metastasis (P < 0.05), whereas no significant relationship was evident for LSD1 immunoreactivity.
24556744	Overexpression	Prostate Carcinoma	The results suggested that SETDB1 was upregulated in human PCa tissues compared with normal tissues at the mRNA and protein levels.
23943221	Overexpression	Glioma	SUV39H1 and SETDB1 expression was upregulated in glioma cell lines (GOS-3, 1321N1, T98G, U87MG) and in glioma tissues compared to normal brain being positively correlated with grade and histological malignancy.
27164857	Overexpression	Hepatocellular Carcinoma	They identified SETDB1 as the most significantly up-regulated epigenetic regulator in human HCC. In their cohort SETDB1 overexpression was associated with metastasis formation and poorer prognosis of HCC patients.

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Somatic copy number alteration in primary tomur tissue

> The Cancer Genome Atlas (TCGA)

[ TOP ]

Correlation between expression and SCNA as well as percentage of patients in different status.

Cancer	Full Name	# Sample	R	P	% Loss	% Neutral	% Gain	Status
BLCA	Bladder urothelial carcinoma	404	0.758	1.58e-76	4.2	46.3	49.5	Gain
BRCA	Breast invasive carcinoma	1075	0.781	1.87e-221	1.8	26.1	72.1	Gain
CESC	Cervical and endocervical cancers	292	0.672	1.22e-39	2.4	44.5	53.1	Gain
COAD	Colon adenocarcinoma	449	0.596	1.9e-44	9.8	70.4	19.8	Neutral
ESCA	Esophageal carcinoma	183	0.684	1.39e-26	4.4	47	48.6	Gain
GBM	Glioblastoma multiforme	147	0.39	1.02e-06	2	79.6	18.4	Neutral
HNSC	Head and Neck squamous cell carcinoma	514	0.635	2.25e-59	7	67.5	25.5	Neutral
KIRC	Kidney renal clear cell carcinoma	525	0.47	3.78e-30	6.3	82.1	11.6	Neutral
KIRP	Kidney renal papillary cell carcinoma	288	0.562	2.46e-25	6.6	87.5	5.9	Neutral
LAML	Acute Myeloid Leukemia	166	0.097	0.216	0	98.8	1.2	Neutral
LGG	Brain Lower Grade Glioma	513	0.219	5.77e-07	1.9	91.2	6.8	Neutral
LIHC	Liver hepatocellular carcinoma	364	0.742	8.17e-65	1.6	25.3	73.1	Gain
LUAD	Lung adenocarcinoma	512	0.779	1.75e-105	2.3	24.8	72.9	Gain
LUSC	Lung squamous cell carcinoma	498	0.688	5.41e-71	4	44.2	51.8	Gain
OV	Ovarian serous cystadenocarcinoma	300	0.657	2.22e-38	2	34.3	63.7	Gain
PAAD	Pancreatic adenocarcinoma	177	0.612	1.43e-19	3.4	65	31.6	Neutral
PCPG	Pheochromocytoma and Paraganglioma	162	0.579	7.35e-16	8	74.7	17.3	Neutral
PRAD	Prostate adenocarcinoma	491	0.477	3.21e-29	0.6	91.2	8.1	Neutral
READ	Rectum adenocarcinoma	164	0.58	3.82e-16	8.5	62.8	28.7	Neutral
SARC	Sarcoma	255	0.639	1.1e-30	5.9	54.1	40	Gain
SKCM	Skin Cutaneous Melanoma	367	0.737	3.88e-64	3.8	41.7	54.5	Gain
STAD	Stomach adenocarcinoma	413	0.638	1.49e-48	1.9	61.7	36.3	Gain
TGCT	Testicular Germ Cell Tumors	150	0.435	2.61e-08	1.3	53.3	45.3	Gain
THCA	Thyroid carcinoma	497	0.486	8.21e-31	0.6	94	5.4	Neutral
THYM	Thymoma	119	0.457	1.8e-07	0	80.7	19.3	Neutral
UCEC	Uterine Corpus Endometrial Carcinoma	537	0.732	3.44e-91	0.4	54.4	45.3	Gain

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Methylation level in the promoter region of CR

> Methylation level in the promoter region of CR

[ TOP ]

Correlation between expression and methylation as well as differential methylation analysis.

Cancer	Full Name	R	P	# N	# T	Delta beta (T vs N)	P value (T vs N)	Status
BLCA	Bladder urothelial carcinoma	-0.543	0	17	408	-0.308	3e-08	Decreased
BRCA	Breast invasive carcinoma	-0.469	0	83	785	-0.005	5.24e-11	NS/NA
CESC	Cervical and endocervical cancers	-0.311	2.9e-08	3	306	NA	NA	NS/NA
COAD	Colon adenocarcinoma	-0.341	5.95e-10	19	297	-0.09	0.0087	NS/NA
ESCA	Esophageal carcinoma	-0.315	8.65e-06	9	185	NA	NA	NS/NA
GBM	Glioblastoma multiforme	-0.181	0.149	1	64	NA	NA	NS/NA
HNSC	Head and Neck squamous cell carcinoma	-0.269	2.47e-10	20	522	-0.028	0.00249	NS/NA
KIRC	Kidney renal clear cell carcinoma	-0.091	0.0907	24	319	0.002	0.373	NS/NA
KIRP	Kidney renal papillary cell carcinoma	-0.16	0.00561	23	275	-0.013	2.35e-05	NS/NA
LAML	Acute Myeloid Leukemia	-0.035	0.646	0	170	NA	NA	NS/NA
LGG	Brain Lower Grade Glioma	-0.028	0.52	0	530	NA	NA	NS/NA
LIHC	Liver hepatocellular carcinoma	-0.435	0	41	373	-0.274	1.59e-16	Decreased
LUAD	Lung adenocarcinoma	-0.383	0	21	456	-0.119	2.58e-08	NS/NA
LUSC	Lung squamous cell carcinoma	-0.353	2.14e-12	8	370	NA	NA	NS/NA
OV	Ovarian serous cystadenocarcinoma	-0.6	0.0968	0	9	NA	NA	NS/NA
PAAD	Pancreatic adenocarcinoma	-0.216	0.0034	4	179	NA	NA	NS/NA
PCPG	Pheochromocytoma and Paraganglioma	-0.317	1.11e-05	3	184	NA	NA	NS/NA
PRAD	Prostate adenocarcinoma	-0.377	0	35	498	-0.19	1.84e-07	NS/NA
READ	Rectum adenocarcinoma	-0.396	4.82e-05	2	99	NA	NA	NS/NA
SARC	Sarcoma	-0.391	6.63e-11	0	263	NA	NA	NS/NA
SKCM	Skin Cutaneous Melanoma	-0.447	0	1	471	NA	NA	NS/NA
STAD	Stomach adenocarcinoma	-0.395	1.6e-15	0	372	NA	NA	NS/NA
TGCT	Testicular Germ Cell Tumors	-0.533	0	0	156	NA	NA	NS/NA
THCA	Thyroid carcinoma	-0.129	0.0023	50	509	-0.001	0.206	NS/NA
THYM	Thymoma	-0.322	0.000315	2	120	NA	NA	NS/NA
UCEC	Uterine Corpus Endometrial Carcinoma	-0.494	0	34	431	-0.011	0.00051	NS/NA

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Primary tumor tissue from TCGA > Normal tumor tissue from HPA

>The Cancer Genome Atlas (TCGA) [ TOP ]
There is no record.

> The Human Protein Atlas (HPA)

[ TOP ]

Tissue	Level	Level Name
Adrenal gland	1	Low
Appendix	2	Medium
Bone marrow	1	Low
Breast	1	Low
Bronchus	3	High
Caudate	2	Medium
Cerebellum	3	High
Cerebral cortex	2	Medium
Cervix, uterine	1	Low
Colon	3	High
Duodenum	3	High
Endometrium	1	Low
Epididymis	3	High
Esophagus	0	Not detected
Fallopian tube	0	Not detected
Gallbladder	3	High
Heart muscle	2	Medium
Hippocampus	2	Medium
Kidney	3	High
Liver	0	Not detected
Lung	1	Low
Lymph node	2	Medium
Nasopharynx	3	High
Oral mucosa	3	High
Ovary	3	High
Pancreas	1	Low
Parathyroid gland	3	High
Placenta	3	High
Prostate	0	Not detected
Rectum	3	High
Salivary gland	0	Not detected
Seminal vesicle	1	Low
Skeletal muscle	1	Low
Skin	1	Low
Small intestine	3	High
Smooth muscle	0	Not detected
Soft tissue	0	Not detected
Spleen	0	Not detected
Stomach	3	High
Testis	2	Medium
Thyroid gland	2	Medium
Tonsil	2	Medium
Urinary bladder	1	Low
Vagina	0	Not detected

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Association between expresson and subtype > Overall survival analysis based on expression > Association between expresson and stage > Association between expresson and grade

> Subtype

[ TOP ]

Association between expresson and subtype.

Cancer	Full Name	# Patients	P Value (Kruskal-Wallis)	Association	Source
BLCA	Bladder urothelial carcinoma	128	0.357	NS	24476821
BRCA	Breast invasive carcinoma	521	7.55e-09	Significant	23000897
COAD	Colon adenocarcinoma	149	0.00445	Significant	22810696
GBM	Glioblastoma multiforme	157	9e-08	Significant	26824661
HNSC	Head and Neck squamous cell carcinoma	279	0.00111	Significant	25631445
KIRP	Kidney renal papillary cell carcinoma	161	0.396	NS	26536169
LGG	Brain Lower Grade Glioma	513	2.54e-19	Significant	26824661
LUAD	Lung adenocarcinoma	230	7.31e-06	Significant	25079552
LUSC	Lung squamous cell carcinoma	178	2.83e-06	Significant	22960745
OV	Ovarian serous cystadenocarcinoma	287	5.15e-10	Significant	21720365
PRAD	Prostate adenocarcinoma	333	1.27e-08	Significant	26544944
READ	Rectum adenocarcinoma	67	0.0695	NS	22810696
SKCM	Skin Cutaneous Melanoma	315	2.19e-06	Significant	26091043
STAD	Stomach adenocarcinoma	277	5.86e-09	Significant	25079317
THCA	Thyroid carcinoma	391	0.107	NS	25417114
UCEC	Uterine Corpus Endometrial Carcinoma	232	0.00972	Significant	23636398

> Overall survival

[ TOP ]

Overall survival analysis based on expression.

Cancer	Full Name	# Patients	Hazard Ratio	P Value (Log Rank Test)	Association
BLCA	Bladder urothelial carcinoma	405	0.881	0.54	NS
BRCA	Breast invasive carcinoma	1079	0.878	0.562	NS
CESC	Cervical and endocervical cancers	291	1.287	0.491	NS
COAD	Colon adenocarcinoma	439	1.792	0.044	Shorter
ESCA	Esophageal carcinoma	184	0.959	0.903	NS
GBM	Glioblastoma multiforme	158	0.629	0.069	NS
HNSC	Head and Neck squamous cell carcinoma	518	0.795	0.227	NS
KIRC	Kidney renal clear cell carcinoma	531	1.26	0.286	NS
KIRP	Kidney renal papillary cell carcinoma	287	2.085	0.0638	NS
LAML	Acute Myeloid Leukemia	149	0.485	0.026	Longer
LGG	Brain Lower Grade Glioma	511	0.73	0.204	NS
LIHC	Liver hepatocellular carcinoma	365	1.456	0.129	NS
LUAD	Lung adenocarcinoma	502	1.04	0.851	NS
LUSC	Lung squamous cell carcinoma	494	0.911	0.631	NS
OV	Ovarian serous cystadenocarcinoma	303	0.76	0.193	NS
PAAD	Pancreatic adenocarcinoma	177	0.839	0.586	NS
PCPG	Pheochromocytoma and Paraganglioma	179	652100377.027	0.0701	NS
PRAD	Prostate adenocarcinoma	497	1.388	0.745	NS
READ	Rectum adenocarcinoma	159	0.987	0.981	NS
SARC	Sarcoma	259	1.137	0.65	NS
SKCM	Skin Cutaneous Melanoma	459	1.504	0.0267	Shorter
STAD	Stomach adenocarcinoma	388	0.876	0.544	NS
TGCT	Testicular Germ Cell Tumors	134	0.537	0.605	NS
THCA	Thyroid carcinoma	500	1.055	0.932	NS
THYM	Thymoma	119	1.212	0.836	NS
UCEC	Uterine Corpus Endometrial Carcinoma	543	1.444	0.254	NS

> Stage

[ TOP ]

Association between expresson and stage.

Cancer	Full Name	# Patients	R Value (Spearman)	P Value (Spearman)	Association
BLCA	Bladder urothelial carcinoma	406	-0.056	0.261	NS
BRCA	Breast invasive carcinoma	1071	-0.02	0.503	NS
CESC	Cervical and endocervical cancers	167	0.008	0.918	NS
COAD	Colon adenocarcinoma	445	0.053	0.268	NS
ESCA	Esophageal carcinoma	162	-0.013	0.867	NS
HNSC	Head and Neck squamous cell carcinoma	448	-0.046	0.334	NS
KIRC	Kidney renal clear cell carcinoma	531	0.049	0.261	NS
KIRP	Kidney renal papillary cell carcinoma	260	0.223	0.000295	Higher
LIHC	Liver hepatocellular carcinoma	347	0.104	0.0539	NS
LUAD	Lung adenocarcinoma	507	-0.012	0.786	NS
LUSC	Lung squamous cell carcinoma	497	0.001	0.983	NS
OV	Ovarian serous cystadenocarcinoma	302	-0.074	0.198	NS
PAAD	Pancreatic adenocarcinoma	176	0.03	0.688	NS
READ	Rectum adenocarcinoma	156	0.033	0.682	NS
SKCM	Skin Cutaneous Melanoma	410	-0.022	0.654	NS
STAD	Stomach adenocarcinoma	392	-0.023	0.651	NS
TGCT	Testicular Germ Cell Tumors	81	-0.286	0.00957	Lower
THCA	Thyroid carcinoma	499	0.046	0.31	NS
UCEC	Uterine Corpus Endometrial Carcinoma	501	-0.029	0.511	NS

> Grade

[ TOP ]

Association between expresson and grade.

Cancer	Full Name	# Patients	R Value (Spearman)	P Value (Spearman)	Association
CESC	Cervical and endocervical cancers	272	0.15	0.0132	Higher
HNSC	Head and Neck squamous cell carcinoma	498	0.117	0.0088	Higher
KIRC	Kidney renal clear cell carcinoma	525	0.011	0.798	NS
LGG	Brain Lower Grade Glioma	514	0.063	0.153	NS
LIHC	Liver hepatocellular carcinoma	366	0.243	2.48e-06	Higher
OV	Ovarian serous cystadenocarcinoma	296	-0.025	0.666	NS
PAAD	Pancreatic adenocarcinoma	176	0.08	0.289	NS
STAD	Stomach adenocarcinoma	406	-0.194	8.5e-05	Lower
UCEC	Uterine Corpus Endometrial Carcinoma	534	0.043	0.32	NS

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Targets inferred by reverse engineering method > Targets identified by ChIP-seq data

> Targets inferred by reverse engineering method [ TOP ]

> Targets identified by ChIP-seq data [ TOP ]

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Drugs from DrugBank database

> Drugs from DrugBank database [ TOP ]
There is no record for SETDB1.

Summary
Symbol	SETDB1
Name	SET domain bifurcated 1
Aliases	KG1T; KIAA0067; ESET; KMT1E; TDRD21; tudor domain containing 21; H3-K9-HMTase4; ERG-associated protein with ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Protein-Protein Interaction Network > miRNA Regulatory Relationship > Interactions from Text Mining

> Protein-Protein Interaction Network [ TOP ]

> miRNA Regulatory Relationship [ TOP ]

> Interactions from Text Mining

[ TOP ]

PMID	Cancer	Hierarchy	Gene	Relation to CR	Evidence
26471002	Hepatocellular Carcinoma	partner	R249S; p53	Association; Complex formation	We show that in hepatocellular carcinoma (HCC) SETDB1 is overexpressed with moderate copy number gain, and GOF TP53 mutations including R249S associate with this overexpression; Moreover, SETDB1 forms a complex with p53 and catalyses p53K370 di-methylation.
26471002	Hepatocellular Carcinoma	downstream	p53K370	regulation	Moreover, SETDB1 forms a complex with p53 and catalyses p53K370 di-methylation.