Browse SMYD2 in pancancer

Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Domain, Function and Classification
> Gene Ontology
> KEGG and Reactome Pathway
> Domain, Function and Classification
 
Domain PF00856 SET domain
PF01753 MYND finger
Function

Protein-lysine N-methyltransferase that methylates both histones and non-histone proteins, including p53/TP53 and RB1. Specifically methylates histone H3 'Lys-4' (H3K4me) and dimethylates histone H3 'Lys-36' (H3K36me2). Shows even higher methyltransferase activity on p53/TP53. Monomethylates 'Lys-370' of p53/TP53, leading to decreased DNA-binding activity and subsequent transcriptional regulation activity of p53/TP53. Monomethylates RB1 at 'Lys-860'.

Classification
Class Modification Substrate Product PubMed
Histone modification write Histone methylation H3K4, H3K36 H3K4me, H3K36me2 18065756
> Gene Ontology
 
Biological Process GO:0006479 protein methylation
GO:0007507 heart development
GO:0008213 protein alkylation
GO:0010452 histone H3-K36 methylation
GO:0016570 histone modification
GO:0016571 histone methylation
GO:0018022 peptidyl-lysine methylation
GO:0018026 peptidyl-lysine monomethylation
GO:0018027 peptidyl-lysine dimethylation
GO:0018205 peptidyl-lysine modification
GO:0030330 DNA damage response, signal transduction by p53 class mediator
GO:0032259 methylation
GO:0034968 histone lysine methylation
GO:0042770 signal transduction in response to DNA damage
GO:0043414 macromolecule methylation
GO:0043516 regulation of DNA damage response, signal transduction by p53 class mediator
GO:0072331 signal transduction by p53 class mediator
GO:1901796 regulation of signal transduction by p53 class mediator
GO:2001020 regulation of response to DNA damage stimulus
Molecular Function GO:0000993 RNA polymerase II core binding
GO:0001098 basal transcription machinery binding
GO:0001099 basal RNA polymerase II transcription machinery binding
GO:0002039 p53 binding
GO:0008168 methyltransferase activity
GO:0008170 N-methyltransferase activity
GO:0008276 protein methyltransferase activity
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
GO:0016278 lysine N-methyltransferase activity
GO:0016279 protein-lysine N-methyltransferase activity
GO:0016741 transferase activity, transferring one-carbon groups
GO:0018024 histone-lysine N-methyltransferase activity
GO:0042054 histone methyltransferase activity
GO:0043175 RNA polymerase core enzyme binding
GO:0046975 histone methyltransferase activity (H3-K36 specific)
GO:0070063 RNA polymerase binding
Cellular Component -
> KEGG and Reactome Pathway
 
KEGG -
Reactome R-HSA-3247509: Chromatin modifying enzymes
R-HSA-4839726: Chromatin organization
R-HSA-74160: Gene Expression
R-HSA-212436: Generic Transcription Pathway
R-HSA-3214841: PKMTs methylate histone lysines
R-HSA-5633007: Regulation of TP53 Activity
R-HSA-6804760: Regulation of TP53 Activity through Methylation
R-HSA-3700989: Transcriptional Regulation by TP53
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Mutation landscape in primary tumor tissue from TCGA
> Mutation landscape in cancer cell line from CCLE
> All mutations from COSMIC database V81
> Variations from text mining
> The Cancer Genome Atlas (TCGA)
 
> Cancer Cell Line Encyclopedia (CCLE)
 
There is no record.
> Catalogue of Somatic Mutations in Cancer (COSMIC)
 
COSMIC ID CDS change AA change Mutation Type Anatomical Site
COSM5379612c.361G>Ap.E121KSubstitution - MissenseSkin
COSM346574c.796G>Ap.E266KSubstitution - MissenseLung
COSM3689341c.181G>Tp.G61*Substitution - NonsenseLarge_intestine
COSM3705476c.1098C>Ap.I366ISubstitution - coding silentLiver
COSM4519744c.1026G>Ap.M342ISubstitution - MissenseSkin
COSM903690c.493G>Ap.G165RSubstitution - MissenseEndometrium
COSM2151411c.1032C>Ap.Y344*Substitution - NonsenseCentral_nervous_system
COSM5427312c.423A>Gp.L141LSubstitution - coding silentHaematopoietic_and_lymphoid_tissue
COSM4728608c.688A>Tp.I230FSubstitution - MissenseLarge_intestine
COSM5031429c.115T>Ap.Y39NSubstitution - MissensePancreas
COSM4493290c.412C>Tp.L138LSubstitution - coding silentSkin
COSM5604960c.407C>Tp.S136LSubstitution - MissenseSkin
COSM4949851c.317T>Cp.V106ASubstitution - MissenseLiver
COSM1491965c.1113-2A>Tp.?UnknownKidney
COSM342334c.997G>Ap.E333KSubstitution - MissenseLung
COSM903694c.849C>Tp.S283SSubstitution - coding silentEndometrium
COSM1601636c.1143G>Ap.V381VSubstitution - coding silentLiver
COSM1930656c.114C>Gp.A38ASubstitution - coding silentLarge_intestine
COSM1185729c.506A>Cp.N169TSubstitution - MissenseLung
COSM1338726c.65delGp.A23fs*84Deletion - FrameshiftLarge_intestine
COSM3943447c.265G>Tp.E89*Substitution - NonsenseOvary
COSM903692c.612G>Tp.L204FSubstitution - MissenseEndometrium
COSM1295855c.354C>Ap.I118ISubstitution - coding silentUrinary_tract
COSM5786777c.618T>Gp.N206KSubstitution - MissenseBreast
COSM331168c.850G>Tp.D284YSubstitution - MissenseLung
COSM1930657c.131C>Ap.T44KSubstitution - MissenseLarge_intestine
COSM1226915c.380A>Cp.K127TSubstitution - MissenseLarge_intestine
COSM5427312c.423A>Gp.L141LSubstitution - coding silentHaematopoietic_and_lymphoid_tissue
COSM3705476c.1098C>Ap.I366ISubstitution - coding silentLiver
COSM678672c.144G>Tp.R48RSubstitution - coding silentLung
COSM5025509c.409+1G>Ap.?UnknownBreast
COSM4728610c.1257T>Cp.D419DSubstitution - coding silentLarge_intestine
COSM1601635c.300G>Tp.W100CSubstitution - MissenseLiver
COSM5429812c.1033C>Gp.Q345ESubstitution - MissenseOesophagus
COSM903696c.957G>Ap.E319ESubstitution - coding silentEndometrium
COSM5969142c.1147T>Cp.S383PSubstitution - MissenseUpper_aerodigestive_tract
COSM1473385c.559G>Ap.E187KSubstitution - MissenseBreast
COSM5895532c.305C>Tp.P102LSubstitution - MissenseSkin
COSM4949851c.317T>Cp.V106ASubstitution - MissenseLiver
COSM463917c.1249G>Ap.G417SSubstitution - MissenseKidney
COSM903695c.895C>Tp.R299CSubstitution - MissenseEndometrium
COSM5901091c.304C>Tp.P102SSubstitution - MissenseSkin
COSM903689c.378A>Tp.E126DSubstitution - MissenseEndometrium
COSM4412410c.277A>Gp.M93VSubstitution - MissenseOesophagus
COSM1338729c.916C>Tp.R306WSubstitution - MissenseLarge_intestine
COSM903690c.493G>Ap.G165RSubstitution - MissenseStomach
COSM5053079c.256C>Tp.H86YSubstitution - MissenseStomach
COSM425270c.870C>Tp.A290ASubstitution - coding silentSkin
COSM82381c.408A>Gp.S136SSubstitution - coding silentOvary
COSM5379611c.251C>Tp.P84LSubstitution - MissenseSkin
COSM2151411c.1032C>Ap.Y344*Substitution - NonsenseCentral_nervous_system
COSM678670c.656G>Tp.G219VSubstitution - MissenseLung
COSM1601636c.1143G>Ap.V381VSubstitution - coding silentLiver
COSM4963450c.415G>Ap.D139NSubstitution - MissensePancreas
COSM1185728c.503A>Tp.D168VSubstitution - MissenseLung
COSM4804004c.978G>Tp.E326DSubstitution - MissenseLiver
COSM5506768c.1227T>Gp.I409MSubstitution - MissenseBiliary_tract
COSM4746294c.901G>Ap.V301ISubstitution - MissenseCentral_nervous_system
COSM4728609c.839G>Ap.R280QSubstitution - MissenseLarge_intestine
COSM1744426c.337C>Tp.L113LSubstitution - coding silentBiliary_tract
COSM3483230c.354C>Tp.I118ISubstitution - coding silentSkin
COSM5610664c.804C>Tp.T268TSubstitution - coding silentSkin
COSM126338c.430G>Ap.E144KSubstitution - MissenseUpper_aerodigestive_tract
COSM4904460c.730C>Tp.L244LSubstitution - coding silentSkin
COSM425269c.381A>Gp.K127KSubstitution - coding silentBreast
COSM903693c.699_700insGAGp.E235_V236insEInsertion - In frameEndometrium
COSM4433749c.903C>Ap.V301VSubstitution - coding silentOesophagus
COSM5969141c.156C>Tp.C52CSubstitution - coding silentUpper_aerodigestive_tract
COSM1295856c.955G>Ap.E319KSubstitution - MissenseUrinary_tract
COSM3483231c.577C>Tp.H193YSubstitution - MissenseSkin
COSM678671c.197G>Tp.G66VSubstitution - MissenseLung
COSM3483229c.120C>Tp.A40ASubstitution - coding silentSkin
COSM1601635c.300G>Tp.W100CSubstitution - MissenseLiver
COSM1930657c.131C>Ap.T44KSubstitution - MissenseLarge_intestine
COSM1338727c.306C>Ap.P102PSubstitution - coding silentLarge_intestine
COSM5014181c.1297C>Gp.H433DSubstitution - MissenseKidney
COSM4919125c.663G>Tp.L221LSubstitution - coding silentLiver
COSM3360636c.266A>Cp.E89ASubstitution - MissenseKidney
COSM903695c.895C>Tp.R299CSubstitution - MissenseLarge_intestine
COSM403929c.297C>Ap.N99KSubstitution - MissenseLung
COSM4804004c.978G>Tp.E326DSubstitution - MissenseLiver
COSM903691c.516C>Tp.L172LSubstitution - coding silentEndometrium
COSM1338728c.591G>Ap.A197ASubstitution - coding silentLarge_intestine
COSM5016920c.670G>Tp.V224FSubstitution - MissenseKidney
COSM903688c.203G>Ap.C68YSubstitution - MissenseEndometrium
COSM3483232c.626G>Ap.C209YSubstitution - MissenseSkin
COSM425270c.870C>Tp.A290ASubstitution - coding silentBreast
COSM4904542c.498C>Tp.F166FSubstitution - coding silentSkin
COSM4963450c.415G>Ap.D139NSubstitution - MissensePancreas
COSM1601636c.1143G>Ap.V381VSubstitution - coding silentLiver
COSM3803839c.766G>Ap.D256NSubstitution - MissenseBreast
COSM903697c.963C>Tp.C321CSubstitution - coding silentEndometrium
> Text Mining based Variations
 
There is no record for SMYD2.
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Post-translational modification (PTM)
> Post-translational modification (PTM)
 
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Uniprot ID Position Amino Acid Description Upstream Enzyme Affected By Mutation Amino Acid Sequence Variant
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Expression analysis in primary tumor tissue from TCGA
> Expression level in cancer cell line from CCLE
> Expression level in human normal tissue from HPA
> Text mining based expression change
> The Cancer Genome Atlas (TCGA)
 


  Differential expression analysis for cancers with more than 10 normal samples
Cancer Full Name # N # T Median (N) Median (T) LogFC Adj. P Status
BLCABladder urothelial carcinoma194084.275.4251.0826.18e-11Over
BRCABreast invasive carcinoma11211005.0065.2260.2390.00159NS
CESCCervical and endocervical cancers33063.8875.493NANANA
COADColon adenocarcinoma414594.45.2570.8744.15e-26Over
ESCAEsophageal carcinoma111854.7934.7960.0670.792NS
GBMGlioblastoma multiforme51665.8455.047NANANA
HNSCHead and Neck squamous cell carcinoma445224.6055.0610.4941.35e-08NS
KIRCKidney renal clear cell carcinoma725345.0445.9340.9094.38e-49Over
KIRPKidney renal papillary cell carcinoma322914.7865.6560.8399.5e-16Over
LAMLAcute Myeloid Leukemia0173NA4.845NANANA
LGGBrain Lower Grade Glioma0530NA3.688NANANA
LIHCLiver hepatocellular carcinoma503734.4695.2550.7766.84e-08Over
LUADLung adenocarcinoma595175.2485.253-0.0110.898NS
LUSCLung squamous cell carcinoma515015.1995.4850.2740.000565NS
OVOvarian serous cystadenocarcinoma0307NA5.038NANANA
PAADPancreatic adenocarcinoma41794.9934.783NANANA
PCPGPheochromocytoma and Paraganglioma31844.1165.533NANANA
PRADProstate adenocarcinoma524984.2584.8680.6384.09e-11Over
READRectum adenocarcinoma101674.4625.2920.7843.58e-06Over
SARCSarcoma22634.7154.284NANANA
SKCMSkin Cutaneous Melanoma14725.3625.154NANANA
STADStomach adenocarcinoma354154.0924.6420.4384.95e-05NS
TGCTTesticular Germ Cell Tumors0156NA4.999NANANA
THCAThyroid carcinoma595095.2364.879-0.3311.21e-11NS
THYMThymoma21205.1065.591NANANA
UCECUterine Corpus Endometrial Carcinoma355464.4345.4770.9658.31e-12Over
> Cancer Cell Line Encyclopedia (CCLE)
 



Tissue Cell Line Expression Level (Microarray)
Autonomic ganglia CHP126 10.4
Autonomic ganglia CHP212 10.6
Autonomic ganglia IMR32 10.2
Autonomic ganglia KELLY 11.4
Autonomic ganglia KPNRTBM1 10.2
Autonomic ganglia KPNSI9S 11.2
Autonomic ganglia KPNYN 10.4
Autonomic ganglia MHHNB11 10.5
Autonomic ganglia NB1 9.8
Autonomic ganglia NH6 10.1
Autonomic ganglia SHSY5Y 10.3
Autonomic ganglia SIMA 9.3
Autonomic ganglia SKNAS 11.8
Autonomic ganglia SKNBE2 11.3
Autonomic ganglia SKNDZ 10.7
Autonomic ganglia SKNFI 8.6
Autonomic ganglia SKNSH 10.2
Biliary tract HUCCT1 11.3
Biliary tract HUH28 10.5
Biliary tract SNU1079 11
Biliary tract SNU1196 9.3
Biliary tract SNU245 10
Biliary tract SNU308 10.7
Biliary tract SNU478 9.3
Bone 143B 10.6
Bone A673 9.4
Bone CADOES1 9.1
Bone CAL78 10.1
Bone G292CLONEA141B1 10.6
Bone HOS 10.5
Bone HS706T 10.3
Bone HS737T 10.4
Bone HS819T 10.4
Bone HS821T 9.5
Bone HS822T 10.7
Bone HS863T 10.6
Bone HS870T 10.8
Bone HS888T 9.6
Bone MG63 10.5
Bone MHHES1 10.6
Bone OUMS27 9.5
Bone RDES 10
Bone SJSA1 10.4
Bone SKES1 10.1
Bone SKNMC 10.3
Bone SW1353 10
Bone T173 10.3
Bone TC71 8.8
Bone U2OS 11.1
Breast AU565 11.5
Breast BT20 11.3
Breast BT474 10.5
Breast BT483 11
Breast BT549 9.9
Breast CAL120 9.6
Breast CAL148 10.7
Breast CAL51 9.6
Breast CAL851 10.9
Breast CAMA1 11.5
Breast DU4475 12.9
Breast EFM192A 10.8
Breast EFM19 11.7
Breast EVSAT 10.7
Breast HCC1143 11.2
Breast HCC1187 11.6
Breast HCC1395 9.8
Breast HCC1419 9.6
Breast HCC1428 11.1
Breast HCC1500 10.8
Breast HCC1569 11.4
Breast HCC1599 11.4
Breast HCC1806 11.1
Breast HCC1937 10
Breast HCC1954 10.6
Breast HCC202 11.4
Breast HCC2157 11.4
Breast HCC2218 10.4
Breast HCC38 10
Breast HCC70 10.8
Breast HDQP1 10.2
Breast HMC18 10.4
Breast HS274T 10.7
Breast HS281T 10.1
Breast HS343T 10.1
Breast HS578T 10.1
Breast HS606T 10.2
Breast HS739T 10.4
Breast HS742T 10.6
Breast JIMT1 10.7
Breast KPL1 9.8
Breast MCF7 9.4
Breast MDAMB134VI 9.7
Breast MDAMB157 11.1
Breast MDAMB175VII 10.7
Breast MDAMB231 11
Breast MDAMB361 10.6
Breast MDAMB415 10.3
Breast MDAMB436 10.1
Breast MDAMB453 11
Breast MDAMB468 11.7
Breast SKBR3 11.2
Breast T47D 11.4
Breast UACC812 10.4
Breast UACC893 10.3
Breast YMB1 10.5
Breast ZR751 11.9
Breast ZR7530 10.5
Central nervous system 1321N1 10.8
Central nervous system 42MGBA 10.4
Central nervous system 8MGBA 10.5
Central nervous system A172 10.3
Central nervous system AM38 9.5
Central nervous system BECKER 10.3
Central nervous system CAS1 9.3
Central nervous system CCFSTTG1 10.3
Central nervous system D283MED 10.6
Central nervous system D341MED 9.5
Central nervous system DAOY 9.6
Central nervous system DBTRG05MG 9.8
Central nervous system DKMG 9.8
Central nervous system GAMG 9.7
Central nervous system GB1 10.5
Central nervous system GI1 10.9
Central nervous system GMS10 10.1
Central nervous system GOS3 10
Central nervous system H4 10.2
Central nervous system HS683 10.2
Central nervous system KALS1 10.5
Central nervous system KG1C 9.6
Central nervous system KNS42 8.9
Central nervous system KNS60 10.3
Central nervous system KNS81 10.1
Central nervous system KS1 10
Central nervous system LN18 10
Central nervous system LN229 11.1
Central nervous system M059K 10.6
Central nervous system MOGGCCM 10.3
Central nervous system MOGGUVW 9.8
Central nervous system NMCG1 9.9
Central nervous system ONS76 10.5
Central nervous system SF126 10.4
Central nervous system SF295 9.6
Central nervous system SNB19 11.2
Central nervous system SNU1105 10.4
Central nervous system SNU201 9.2
Central nervous system SNU466 10.3
Central nervous system SNU489 9.6
Central nervous system SNU626 9.2
Central nervous system SNU738 10.3
Central nervous system SW1088 10.1
Central nervous system SW1783 10.2
Central nervous system T98G 10.1
Central nervous system TM31 9.5
Central nervous system U118MG 9
Central nervous system U138MG 10.4
Central nervous system U251MG 10.8
Central nervous system U87MG 10.5
Central nervous system YH13 10.2
Central nervous system YKG1 10
Endometrium AN3CA 9.6
Endometrium COLO684 11.3
Endometrium EFE184 10.8
Endometrium EN 10
Endometrium ESS1 10.3
Endometrium HEC108 10
Endometrium HEC151 10.2
Endometrium HEC1A 11
Endometrium HEC1B 10.6
Endometrium HEC251 9.3
Endometrium HEC265 10.8
Endometrium HEC50B 11.2
Endometrium HEC59 8.6
Endometrium HEC6 10.9
Endometrium ISHIKAWAHERAKLIO02ER 9.8
Endometrium JHUEM1 8.9
Endometrium JHUEM2 11.1
Endometrium JHUEM3 12
Endometrium KLE 11.1
Endometrium MFE280 10.6
Endometrium MFE296 9.8
Endometrium MFE319 10
Endometrium RL952 11.6
Endometrium SNGM 10.2
Endometrium SNU1077 11.4
Endometrium SNU685 10.6
Endometrium TEN 10.1
Haematopoietic and lymphoid 697 11.4
Haematopoietic and lymphoid A3KAW 10.4
Haematopoietic and lymphoid A4FUK 9.3
Haematopoietic and lymphoid ALLSIL 10.3
Haematopoietic and lymphoid AML193 10.4
Haematopoietic and lymphoid AMO1 9
Haematopoietic and lymphoid BCP1 10.2
Haematopoietic and lymphoid BDCM 10.4
Haematopoietic and lymphoid BL41 10
Haematopoietic and lymphoid BL70 10.5
Haematopoietic and lymphoid BV173 10.1
Haematopoietic and lymphoid CA46 9.6
Haematopoietic and lymphoid CI1 10.1
Haematopoietic and lymphoid CMK115 9.2
Haematopoietic and lymphoid CMK86 10.5
Haematopoietic and lymphoid CMK 9.4
Haematopoietic and lymphoid CMLT1 10.5
Haematopoietic and lymphoid COLO775 10.3
Haematopoietic and lymphoid DAUDI 9.9
Haematopoietic and lymphoid DB 10.1
Haematopoietic and lymphoid DEL 11.3
Haematopoietic and lymphoid DND41 10.5
Haematopoietic and lymphoid DOHH2 10
Haematopoietic and lymphoid EB1 9.5
Haematopoietic and lymphoid EB2 9.8
Haematopoietic and lymphoid EHEB 9.5
Haematopoietic and lymphoid EJM 9
Haematopoietic and lymphoid EM2 9.6
Haematopoietic and lymphoid EOL1 8.8
Haematopoietic and lymphoid F36P 9.4
Haematopoietic and lymphoid GA10 10.3
Haematopoietic and lymphoid GDM1 7.6
Haematopoietic and lymphoid GRANTA519 9.7
Haematopoietic and lymphoid HDLM2 9.4
Haematopoietic and lymphoid HDMYZ 9.1
Haematopoietic and lymphoid HEL9217 8.8
Haematopoietic and lymphoid HEL 8.3
Haematopoietic and lymphoid HH 10.4
Haematopoietic and lymphoid HL60 9.5
Haematopoietic and lymphoid HPBALL 10.3
Haematopoietic and lymphoid HS604T 10.1
Haematopoietic and lymphoid HS611T 10.1
Haematopoietic and lymphoid HS616T 10.9
Haematopoietic and lymphoid HS751T 9.8
Haematopoietic and lymphoid HT 10.3
Haematopoietic and lymphoid HTK 10.7
Haematopoietic and lymphoid HUNS1 10.2
Haematopoietic and lymphoid HUT102 8.4
Haematopoietic and lymphoid HUT78 10.4
Haematopoietic and lymphoid JEKO1 9.5
Haematopoietic and lymphoid JK1 9.5
Haematopoietic and lymphoid JM1 10.8
Haematopoietic and lymphoid JURKAT 10.2
Haematopoietic and lymphoid JURLMK1 9.7
Haematopoietic and lymphoid JVM2 8.8
Haematopoietic and lymphoid JVM3 8.8
Haematopoietic and lymphoid K562 10.3
Haematopoietic and lymphoid KARPAS299 11.5
Haematopoietic and lymphoid KARPAS422 9.1
Haematopoietic and lymphoid KARPAS620 9.4
Haematopoietic and lymphoid KASUMI1 9.9
Haematopoietic and lymphoid KASUMI2 12
Haematopoietic and lymphoid KASUMI6 8.6
Haematopoietic and lymphoid KCL22 10.3
Haematopoietic and lymphoid KE37 11.8
Haematopoietic and lymphoid KE97 10.7
Haematopoietic and lymphoid KG1 9.6
Haematopoietic and lymphoid KHM1B 9.8
Haematopoietic and lymphoid KIJK 11.7
Haematopoietic and lymphoid KMH2 11
Haematopoietic and lymphoid KMM1 9.8
Haematopoietic and lymphoid KMS11 11.1
Haematopoietic and lymphoid KMS12BM 9.5
Haematopoietic and lymphoid KMS18 10.1
Haematopoietic and lymphoid KMS20 9.1
Haematopoietic and lymphoid KMS21BM 10.3
Haematopoietic and lymphoid KMS26 7.4
Haematopoietic and lymphoid KMS27 9.4
Haematopoietic and lymphoid KMS28BM 9.9
Haematopoietic and lymphoid KMS34 10.2
Haematopoietic and lymphoid KO52 10.2
Haematopoietic and lymphoid KOPN8 10.6
Haematopoietic and lymphoid KU812 10.1
Haematopoietic and lymphoid KYO1 10.2
Haematopoietic and lymphoid L1236 10.3
Haematopoietic and lymphoid L363 9.2
Haematopoietic and lymphoid L428 9.5
Haematopoietic and lymphoid L540 10.5
Haematopoietic and lymphoid LAMA84 9.2
Haematopoietic and lymphoid LOUCY 12.1
Haematopoietic and lymphoid LP1 7.7
Haematopoietic and lymphoid M07E 10.2
Haematopoietic and lymphoid MC116 10.7
Haematopoietic and lymphoid ME1 9.4
Haematopoietic and lymphoid MEC1 9.6
Haematopoietic and lymphoid MEC2 10
Haematopoietic and lymphoid MEG01 9.6
Haematopoietic and lymphoid MHHCALL2 10.8
Haematopoietic and lymphoid MHHCALL3 11.5
Haematopoietic and lymphoid MHHCALL4 9.8
Haematopoietic and lymphoid MINO 10.3
Haematopoietic and lymphoid MJ 10.2
Haematopoietic and lymphoid MM1S 10
Haematopoietic and lymphoid MOLM13 10.2
Haematopoietic and lymphoid MOLM16 8.4
Haematopoietic and lymphoid MOLM6 10.3
Haematopoietic and lymphoid MOLP2 9.3
Haematopoietic and lymphoid MOLP8 9.5
Haematopoietic and lymphoid MOLT13 10.6
Haematopoietic and lymphoid MOLT16 10.4
Haematopoietic and lymphoid MOLT4 10.4
Haematopoietic and lymphoid MONOMAC1 9
Haematopoietic and lymphoid MONOMAC6 9
Haematopoietic and lymphoid MOTN1 9.5
Haematopoietic and lymphoid MUTZ5 8.7
Haematopoietic and lymphoid MV411 9.6
Haematopoietic and lymphoid NALM19 11.3
Haematopoietic and lymphoid NALM1 11
Haematopoietic and lymphoid NALM6 10.2
Haematopoietic and lymphoid NAMALWA 10.5
Haematopoietic and lymphoid NB4 10
Haematopoietic and lymphoid NCIH929 10
Haematopoietic and lymphoid NCO2 10.2
Haematopoietic and lymphoid NOMO1 9.1
Haematopoietic and lymphoid NUDHL1 9.8
Haematopoietic and lymphoid NUDUL1 10
Haematopoietic and lymphoid OCIAML2 10.3
Haematopoietic and lymphoid OCIAML3 10.1
Haematopoietic and lymphoid OCIAML5 10.6
Haematopoietic and lymphoid OCILY10 9.5
Haematopoietic and lymphoid OCILY19 10.8
Haematopoietic and lymphoid OCILY3 11.9
Haematopoietic and lymphoid OCIM1 9.4
Haematopoietic and lymphoid OPM2 8
Haematopoietic and lymphoid P12ICHIKAWA 10.6
Haematopoietic and lymphoid P31FUJ 9.7
Haematopoietic and lymphoid P3HR1 10.2
Haematopoietic and lymphoid PCM6 10.8
Haematopoietic and lymphoid PEER 10.6
Haematopoietic and lymphoid PF382 9.8
Haematopoietic and lymphoid PFEIFFER 9.2
Haematopoietic and lymphoid PL21 10.2
Haematopoietic and lymphoid RAJI 10.4
Haematopoietic and lymphoid RCHACV 11
Haematopoietic and lymphoid REC1 9.3
Haematopoietic and lymphoid REH 9.6
Haematopoietic and lymphoid RI1 10.6
Haematopoietic and lymphoid RL 8.5
Haematopoietic and lymphoid RPMI8226 9.5
Haematopoietic and lymphoid RPMI8402 11.4
Haematopoietic and lymphoid RS411 10.7
Haematopoietic and lymphoid SEM 10.4
Haematopoietic and lymphoid SET2 8.3
Haematopoietic and lymphoid SIGM5 10.4
Haematopoietic and lymphoid SKM1 11.3
Haematopoietic and lymphoid SKMM2 9.6
Haematopoietic and lymphoid SR786 11.5
Haematopoietic and lymphoid ST486 10.9
Haematopoietic and lymphoid SUDHL10 10.2
Haematopoietic and lymphoid SUDHL1 11.6
Haematopoietic and lymphoid SUDHL4 9.6
Haematopoietic and lymphoid SUDHL5 10.3
Haematopoietic and lymphoid SUDHL6 9.8
Haematopoietic and lymphoid SUDHL8 9.2
Haematopoietic and lymphoid SUPB15 11.4
Haematopoietic and lymphoid SUPHD1 10.9
Haematopoietic and lymphoid SUPM2 12.6
Haematopoietic and lymphoid SUPT11 10.9
Haematopoietic and lymphoid SUPT1 10.1
Haematopoietic and lymphoid TALL1 11.4
Haematopoietic and lymphoid TF1 9.7
Haematopoietic and lymphoid THP1 9.8
Haematopoietic and lymphoid TO175T 10.9
Haematopoietic and lymphoid TOLEDO 11.3
Haematopoietic and lymphoid U266B1 11.4
Haematopoietic and lymphoid U937 10.1
Haematopoietic and lymphoid UT7 7
Haematopoietic and lymphoid WSUDLCL2 8.9
Kidney 769P 11.4
Kidney 786O 10.7
Kidney A498 10.2
Kidney A704 11.6
Kidney ACHN 11.1
Kidney BFTC909 10
Kidney CAKI1 11.1
Kidney CAKI2 11.3
Kidney CAL54 10
Kidney KMRC1 11.4
Kidney KMRC20 9.6
Kidney KMRC2 11.7
Kidney KMRC3 12
Kidney OSRC2 10.4
Kidney RCC10RGB 11
Kidney SNU1272 11.4
Kidney SNU349 11.3
Kidney TUHR10TKB 11.3
Kidney TUHR14TKB 10.9
Kidney TUHR4TKB 10.8
Kidney VMRCRCW 10.4
Kidney VMRCRCZ 11.1
Large intestine C2BBE1 11.7
Large intestine CCK81 10.7
Large intestine CL11 10.6
Large intestine CL14 10.4
Large intestine CL34 9.7
Large intestine CL40 10.4
Large intestine COLO205 11.2
Large intestine COLO320 9.4
Large intestine COLO678 8.7
Large intestine CW2 10
Large intestine DLD1 10.6
Large intestine GP2D 10.5
Large intestine HCC56 10.8
Large intestine HCT116 9.9
Large intestine HCT15 10.8
Large intestine HS675T 9.8
Large intestine HS698T 10.4
Large intestine HT115 10.3
Large intestine HT29 10.4
Large intestine HT55 10.6
Large intestine KM12 10.6
Large intestine LOVO 10.5
Large intestine LS1034 10.6
Large intestine LS123 10.5
Large intestine LS180 10.6
Large intestine LS411N 9.8
Large intestine LS513 10.6
Large intestine MDST8 10
Large intestine NCIH508 9.3
Large intestine NCIH716 10.2
Large intestine NCIH747 10.6
Large intestine OUMS23 11
Large intestine RCM1 10
Large intestine RKO 11
Large intestine SKCO1 11
Large intestine SNU1040 10.2
Large intestine SNU1197 10.3
Large intestine SNU175 10.3
Large intestine SNU283 10.1
Large intestine SNU407 11.1
Large intestine SNU503 10.5
Large intestine SNU61 10.3
Large intestine SNU81 10.2
Large intestine SNUC1 10.9
Large intestine SNUC2A 8.4
Large intestine SNUC4 10.4
Large intestine SNUC5 10.2
Large intestine SW1116 9.7
Large intestine SW1417 10.4
Large intestine SW1463 10.3
Large intestine SW403 10.8
Large intestine SW480 10.7
Large intestine SW48 10.3
Large intestine SW620 11.2
Large intestine SW837 10.5
Large intestine SW948 10.4
Large intestine T84 10
Liver ALEXANDERCELLS 10.5
Liver C3A 10.5
Liver HEP3B217 11.4
Liver HEPG2 10.9
Liver HLE 9.1
Liver HLF 10.4
Liver HUH1 10.8
Liver HUH6 11.4
Liver HUH7 10.6
Liver JHH1 9.1
Liver JHH2 9.7
Liver JHH4 10.7
Liver JHH5 11.2
Liver JHH6 9.9
Liver JHH7 10.6
Liver LI7 9.4
Liver PLCPRF5 10.5
Liver SKHEP1 9.8
Liver SNU182 10.9
Liver SNU387 10.7
Liver SNU398 10.2
Liver SNU423 9.6
Liver SNU449 11.2
Liver SNU475 10.4
Liver SNU761 10.9
Liver SNU878 10.2
Liver SNU886 10.1
Lung A549 10.4
Lung ABC1 11.3
Lung BEN 8
Lung CAL12T 10.3
Lung CALU1 10.9
Lung CALU3 10.4
Lung CALU6 9.9
Lung CHAGOK1 8.9
Lung COLO668 10.3
Lung COLO699 10.3
Lung CORL105 10.9
Lung CORL23 9.8
Lung CORL24 11.1
Lung CORL279 11.3
Lung CORL311 10.5
Lung CORL47 10.7
Lung CORL51 10.3
Lung CORL88 10.5
Lung CORL95 10.4
Lung CPCN 11.5
Lung DMS114 10.9
Lung DMS153 10.9
Lung DMS273 11.1
Lung DMS454 9.7
Lung DMS53 11.3
Lung DMS79 10
Lung DV90 11.1
Lung EBC1 9.9
Lung EPLC272H 11
Lung HARA 10.5
Lung HCC1171 10.4
Lung HCC1195 9.5
Lung HCC15 10.3
Lung HCC2279 9.1
Lung HCC2935 9.4
Lung HCC33 10.6
Lung HCC366 9.9
Lung HCC4006 10.3
Lung HCC44 9.9
Lung HCC78 10.6
Lung HCC827 10.8
Lung HCC95 10
Lung HLC1 10.1
Lung HLFA 9.6
Lung HS229T 10.5
Lung HS618T 9.7
Lung IALM 10.3
Lung KNS62 9.9
Lung LC1F 9.9
Lung LC1SQSF 10
Lung LCLC103H 9.5
Lung LCLC97TM1 9.9
Lung LK2 12.5
Lung LOUNH91 10.1
Lung LU65 10.8
Lung LU99 11.3
Lung LUDLU1 10.4
Lung LXF289 9.9
Lung MORCPR 11
Lung NCIH1048 12.2
Lung NCIH1092 10.5
Lung NCIH1105 10.3
Lung NCIH1155 10.2
Lung NCIH1184 10.2
Lung NCIH1299 10.1
Lung NCIH1339 10.9
Lung NCIH1341 10.8
Lung NCIH1355 10.8
Lung NCIH1373 10.7
Lung NCIH1385 11.2
Lung NCIH1395 10.6
Lung NCIH1435 10
Lung NCIH1436 11.1
Lung NCIH1437 10.2
Lung NCIH146 11
Lung NCIH1563 10.2
Lung NCIH1568 10.2
Lung NCIH1573 10.1
Lung NCIH1581 11
Lung NCIH1618 10.5
Lung NCIH1623 10.9
Lung NCIH1648 9.8
Lung NCIH1650 11.1
Lung NCIH1651 10
Lung NCIH1666 11.6
Lung NCIH1693 11.7
Lung NCIH1694 11.3
Lung NCIH1703 10.9
Lung NCIH1734 10.5
Lung NCIH1755 10.8
Lung NCIH1781 10.6
Lung NCIH1792 9.9
Lung NCIH1793 10.8
Lung NCIH1836 11.6
Lung NCIH1838 10.3
Lung NCIH1869 10.5
Lung NCIH1876 10.5
Lung NCIH1915 11.2
Lung NCIH1930 10.8
Lung NCIH1944 10.7
Lung NCIH1963 10.4
Lung NCIH196 10.7
Lung NCIH1975 10.7
Lung NCIH2009 10.5
Lung NCIH2023 10.4
Lung NCIH2029 11.5
Lung NCIH2030 10.7
Lung NCIH2066 10.1
Lung NCIH2081 11.8
Lung NCIH2085 11.9
Lung NCIH2087 10.6
Lung NCIH209 10
Lung NCIH2106 11
Lung NCIH2110 9.9
Lung NCIH211 12.1
Lung NCIH2122 10.7
Lung NCIH2126 10
Lung NCIH2141 9.4
Lung NCIH2170 10.6
Lung NCIH2171 9.9
Lung NCIH2172 10.5
Lung NCIH2196 10.6
Lung NCIH2227 10.4
Lung NCIH2228 10.7
Lung NCIH226 9.3
Lung NCIH2286 10.9
Lung NCIH2291 10.4
Lung NCIH2342 10.7
Lung NCIH2347 11.1
Lung NCIH23 10.4
Lung NCIH2405 9.8
Lung NCIH2444 11.2
Lung NCIH292 10.3
Lung NCIH322 11
Lung NCIH3255 10.3
Lung NCIH358 10.2
Lung NCIH441 10.7
Lung NCIH446 10.5
Lung NCIH460 10.6
Lung NCIH510 10.8
Lung NCIH520 12.5
Lung NCIH522 10.3
Lung NCIH524 10.3
Lung NCIH526 9.1
Lung NCIH596 10.4
Lung NCIH647 10.3
Lung NCIH650 10.2
Lung NCIH661 10.8
Lung NCIH69 11.4
Lung NCIH727 10.7
Lung NCIH810 8.6
Lung NCIH82 11.1
Lung NCIH838 10.7
Lung NCIH841 10.9
Lung NCIH854 9.8
Lung NCIH889 11.5
Lung PC14 10.5
Lung RERFLCAD1 10.3
Lung RERFLCAD2 10.9
Lung RERFLCAI 10.3
Lung RERFLCKJ 9.9
Lung RERFLCMS 10.2
Lung RERFLCSQ1 9.9
Lung SBC5 10
Lung SCLC21H 9.3
Lung SHP77 11.1
Lung SKLU1 8.7
Lung SKMES1 10.6
Lung SQ1 10.7
Lung SW1271 10.3
Lung SW1573 10.4
Lung SW900 10.5
Lung VMRCLCD 10.1
Lung VMRCLCP 10
Oesophagus COLO680N 10.4
Oesophagus ECGI10 9.2
Oesophagus KYSE140 10.9
Oesophagus KYSE150 11.6
Oesophagus KYSE180 10.5
Oesophagus KYSE270 10.8
Oesophagus KYSE30 9.9
Oesophagus KYSE410 10.6
Oesophagus KYSE450 10.4
Oesophagus KYSE510 10.3
Oesophagus KYSE520 10.3
Oesophagus KYSE70 9.5
Oesophagus OE19 9.7
Oesophagus OE33 10.4
Oesophagus TE10 8.8
Oesophagus TE11 10.4
Oesophagus TE14 10.2
Oesophagus TE15 10.6
Oesophagus TE1 10.4
Oesophagus TE4 10.1
Oesophagus TE5 10.9
Oesophagus TE6 10.7
Oesophagus TE8 9.9
Oesophagus TE9 10.5
Oesophagus TT 10.5
Ovary 59M 10.5
Ovary A2780 10
Ovary CAOV3 9.9
Ovary CAOV4 9.3
Ovary COLO704 11.2
Ovary COV318 10.7
Ovary COV362 9.4
Ovary COV434 8.5
Ovary COV504 10
Ovary COV644 10
Ovary EFO21 10.4
Ovary EFO27 9.9
Ovary ES2 10.4
Ovary FUOV1 10.5
Ovary HEYA8 10.9
Ovary HS571T 10.7
Ovary IGROV1 11.1
Ovary JHOC5 10.2
Ovary JHOM1 9.6
Ovary JHOM2B 10.1
Ovary JHOS2 9.9
Ovary JHOS4 10.7
Ovary KURAMOCHI 10.4
Ovary MCAS 9.7
Ovary NIHOVCAR3 9.7
Ovary OAW28 9.1
Ovary OAW42 10.5
Ovary OC314 10.4
Ovary OC316 10.2
Ovary ONCODG1 9.4
Ovary OV56 10.4
Ovary OV7 10.5
Ovary OV90 11.1
Ovary OVCAR4 9.8
Ovary OVCAR8 9.4
Ovary OVISE 10.3
Ovary OVK18 10.1
Ovary OVKATE 9.3
Ovary OVMANA 9.9
Ovary OVSAHO 9.5
Ovary OVTOKO 10.5
Ovary RMGI 8.8
Ovary RMUGS 11.4
Ovary SKOV3 10.8
Ovary SNU119 10.5
Ovary SNU840 10.9
Ovary SNU8 10.8
Ovary TOV112D 9.9
Ovary TOV21G 10.7
Ovary TYKNU 10
Pancreas ASPC1 10.2
Pancreas BXPC3 9.8
Pancreas CAPAN1 9.7
Pancreas CAPAN2 10.7
Pancreas CFPAC1 10.2
Pancreas DANG 10.8
Pancreas HPAC 10.3
Pancreas HPAFII 9.4
Pancreas HS766T 9.7
Pancreas HUPT3 10.4
Pancreas HUPT4 9.9
Pancreas KCIMOH1 10.8
Pancreas KLM1 10.5
Pancreas KP2 9.8
Pancreas KP3 9.8
Pancreas KP4 9.7
Pancreas L33 10.8
Pancreas MIAPACA2 10.3
Pancreas PANC0203 10.5
Pancreas PANC0213 9.6
Pancreas PANC0327 10.8
Pancreas PANC0403 9.9
Pancreas PANC0504 9.8
Pancreas PANC0813 10
Pancreas PANC1005 10.1
Pancreas PANC1 10.3
Pancreas PATU8902 10.6
Pancreas PATU8988S 10.4
Pancreas PATU8988T 10.9
Pancreas PK1 10.8
Pancreas PK45H 10
Pancreas PK59 9.6
Pancreas PL45 10.6
Pancreas PSN1 10.4
Pancreas QGP1 10
Pancreas SNU213 10.3
Pancreas SNU324 10.4
Pancreas SNU410 10.2
Pancreas SU8686 10.3
Pancreas SUIT2 9.8
Pancreas SW1990 11.3
Pancreas T3M4 9.7
Pancreas TCCPAN2 9.7
Pancreas YAPC 10.3
Pleura ACCMESO1 9.6
Pleura DM3 9.7
Pleura ISTMES1 10.6
Pleura ISTMES2 10.7
Pleura JL1 9
Pleura MPP89 10.7
Pleura MSTO211H 10.4
Pleura NCIH2052 10.7
Pleura NCIH2452 9.9
Pleura NCIH28 10.9
Prostate 22RV1 9
Prostate DU145 10.1
Prostate LNCAPCLONEFGC 7.7
Prostate MDAPCA2B 5.4
Prostate NCIH660 11.1
Prostate PC3 11.5
Prostate VCAP 9.5
Salivary gland A253 9.8
Salivary gland YD15 11
Skin A101D 10.2
Skin A2058 10.1
Skin A375 11.1
Skin C32 10.6
Skin CHL1 10.9
Skin CJM 10.7
Skin COLO679 9.5
Skin COLO741 10.3
Skin COLO783 10.3
Skin COLO792 10.2
Skin COLO800 10.5
Skin COLO818 9.8
Skin COLO829 10
Skin COLO849 10.2
Skin G361 9.5
Skin GRM 10.5
Skin HMCB 10.9
Skin HS294T 9.7
Skin HS600T 10.8
Skin HS688AT 10.4
Skin HS695T 10.6
Skin HS839T 9.9
Skin HS852T 10.2
Skin HS895T 10.5
Skin HS934T 10.1
Skin HS936T 9.6
Skin HS939T 10.6
Skin HS940T 10.6
Skin HS944T 10.2
Skin HT144 10.9
Skin IGR1 9.4
Skin IGR37 10.6
Skin IGR39 9.7
Skin IPC298 10.5
Skin K029AX 10.2
Skin LOXIMVI 11.1
Skin MALME3M 10
Skin MDAMB435S 10.4
Skin MELHO 10.3
Skin MELJUSO 10.7
Skin MEWO 10.7
Skin RPMI7951 10.6
Skin RVH421 10.9
Skin SH4 11
Skin SKMEL1 10
Skin SKMEL24 10.1
Skin SKMEL28 10.5
Skin SKMEL2 10.1
Skin SKMEL30 11.2
Skin SKMEL31 10.1
Skin SKMEL3 10.6
Skin SKMEL5 10.2
Skin UACC257 10.9
Skin UACC62 9.5
Skin WM115 9.8
Skin WM1799 10
Skin WM2664 9.5
Skin WM793 10
Skin WM88 11.1
Skin WM983B 9.6
Small intestine HUTU80 10.2
Soft tissue A204 10
Soft tissue G401 9.8
Soft tissue G402 10.5
Soft tissue GCT 10
Soft tissue HS729 9.7
Soft tissue HT1080 10
Soft tissue KYM1 9.9
Soft tissue MESSA 10.1
Soft tissue RD 10.1
Soft tissue RH30 11.4
Soft tissue RH41 10.1
Soft tissue RKN 9
Soft tissue S117 10.6
Soft tissue SJRH30 10
Soft tissue SKLMS1 9.8
Soft tissue SKUT1 10.7
Soft tissue TE125T 11
Soft tissue TE159T 9.5
Soft tissue TE441T 9.3
Soft tissue TE617T 10.1
Stomach 2313287 9.4
Stomach AGS 10.6
Stomach AZ521 10
Stomach ECC10 11.6
Stomach ECC12 11.6
Stomach FU97 10.3
Stomach GCIY 10.1
Stomach GSS 11.4
Stomach GSU 9.7
Stomach HGC27 11.7
Stomach HS746T 10.6
Stomach HUG1N 9.6
Stomach IM95 10.4
Stomach KATOIII 9.5
Stomach KE39 9.9
Stomach LMSU 10.6
Stomach MKN1 9.9
Stomach MKN45 10
Stomach MKN74 9.6
Stomach MKN7 10.8
Stomach NCCSTCK140 10.3
Stomach NCIN87 10.3
Stomach NUGC2 11.1
Stomach NUGC3 11
Stomach NUGC4 9.6
Stomach OCUM1 10.5
Stomach RERFGC1B 10.2
Stomach SH10TC 10.5
Stomach SNU16 10.3
Stomach SNU1 10.4
Stomach SNU216 10.2
Stomach SNU520 9.5
Stomach SNU5 9.8
Stomach SNU601 10.1
Stomach SNU620 10.1
Stomach SNU668 10.8
Stomach SNU719 10.3
Stomach TGBC11TKB 10.8
Thyroid 8305C 10.8
Thyroid 8505C 9.7
Thyroid BCPAP 10.5
Thyroid BHT101 10.2
Thyroid CAL62 10.1
Thyroid CGTHW1 10.7
Thyroid FTC133 10.3
Thyroid FTC238 10.2
Thyroid ML1 9.9
Thyroid SW579 10.5
Thyroid TT2609C02 10.3
Thyroid TT 10.4
Upper aerodigestive tract BHY 10.1
Upper aerodigestive tract BICR16 10.9
Upper aerodigestive tract BICR18 9.8
Upper aerodigestive tract BICR22 9.8
Upper aerodigestive tract BICR31 10.2
Upper aerodigestive tract BICR56 9
Upper aerodigestive tract BICR6 10.1
Upper aerodigestive tract CAL27 10
Upper aerodigestive tract CAL33 8.8
Upper aerodigestive tract DETROIT562 10.6
Upper aerodigestive tract FADU 10.4
Upper aerodigestive tract HS840T 10
Upper aerodigestive tract HSC2 10.8
Upper aerodigestive tract HSC3 11.2
Upper aerodigestive tract HSC4 10.5
Upper aerodigestive tract PECAPJ15 9.4
Upper aerodigestive tract PECAPJ34CLONEC12 10.3
Upper aerodigestive tract PECAPJ41CLONED2 10.9
Upper aerodigestive tract PECAPJ49 10.7
Upper aerodigestive tract SCC15 9.9
Upper aerodigestive tract SCC25 10.3
Upper aerodigestive tract SCC4 10.7
Upper aerodigestive tract SCC9 10.3
Upper aerodigestive tract SNU1076 9.6
Upper aerodigestive tract SNU1214 10.5
Upper aerodigestive tract SNU46 9.7
Upper aerodigestive tract SNU899 9.7
Upper aerodigestive tract YD10B 10.4
Upper aerodigestive tract YD38 10.2
Upper aerodigestive tract YD8 10
Urinary tract 5637 11
Urinary tract 639V 10.1
Urinary tract 647V 10.7
Urinary tract BC3C 9.7
Urinary tract BFTC905 10.3
Urinary tract CAL29 10.2
Urinary tract HS172T 9.9
Urinary tract HT1197 12
Urinary tract HT1376 11.5
Urinary tract J82 10.8
Urinary tract JMSU1 10.7
Urinary tract KMBC2 9.7
Urinary tract KU1919 10.4
Urinary tract RT11284 10.1
Urinary tract RT112 10.7
Urinary tract RT4 10.7
Urinary tract SCABER 11
Urinary tract SW1710 11
Urinary tract SW780 11.4
Urinary tract T24 10.1
Urinary tract TCCSUP 10.5
Urinary tract UMUC1 11.2
Urinary tract UMUC3 9.8
Urinary tract VMCUB1 10.1
> The Human Protein Atlas (HPA)
 


Tissue Expression Level (TPM)
Adipose tissue 16.8
Adrenal gland 22
Appendix 14.3
Bone marrow 6.1
Breast 27
Cerebral cortex 41.6
Cervix, uterine 21.1
Colon 14.8
Duodenum 15.4
Endometrium 18.7
Epididymis 18.7
Esophagus 17.8
Fallopian tube 48.7
Gallbladder 17.6
Heart muscle 126.2
Kidney 24.1
Liver 15.3
Lung 30.4
Lymph node 18.3
Ovary 16.6
Pancreas 3.3
Parathyroid gland 13.3
Placenta 46.5
Prostate 21.4
Rectum 19.3
Salivary gland 6.6
Seminal vesicle 11.9
Skeletal muscle 34.9
Skin 14.6
Small intestine 16.4
Smooth muscle 16.9
Spleen 23.5
Stomach 18
Testis 52
Thyroid gland 38.8
Tonsil 15.4
Urinary bladder 19.7
> Text Mining based Expression
 
PMID Expression Cancer Evidence
26826421OverexpressionHead and Neck Squamous Cell CarcinomaAmong 197 HPV-unrelated HNSCC cases, overexpression of SMYD2 protein was detected in 75 (60%) of 126 nonmultiple cases and 51 (70%) of 71 multiple cases.
26790435OverexpressionChronic Lymphocytic LeukemiaWe found that SMYD2 and SMYD3 are overexpressed in CLL patients and, interestingly, patients with residual expression of both genes presented a high WBC count and complex karyotype.
25321194OverexpressionGastric CarcinomaPatients with SMYD2-overexpressing tumours had a worse overall rate of survival than those with non-expressing tumours (P=0.0073, log-rank test) in an intensity and proportion score-dependent manner.
24631370OverexpressionAcute Lymphocytic LeukemiaThe study revealed that SMYD2 expression is altered in ALL BMS and its high expression was correlated with a bad prognosis.
19423649OverexpressionOesophagal Squamous Cell CarcinomaOverexpression of SMYD2 protein was frequently detected in primary tumor samples of ESCC (117/153 cases, 76.5%) as well and significantly correlated with gender, venous invasion, the pT category in the tumor-lymph node-metastases classification and status of recurrence.
20512085UnderexpressionLaryngeal CarcinomaThe coherent low Sp100 expression of both transcriptional and translational levels were confirmed in the malignant tissues compared to the normal mucosa, and the expression was down-regulated among the well-, moderately- and poorly-differentiated cancer cells accordingly.
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Somatic copy number alteration in primary tomur tissue
> The Cancer Genome Atlas (TCGA)
 


  Correlation between expression and SCNA as well as percentage of patients in different status.
Cancer Full Name # Sample R P % Loss % Neutral % Gain Status
BLCABladder urothelial carcinoma4040.3971.08e-1614.953.531.7Neutral
BRCABreast invasive carcinoma10750.3383.5e-302.823.773.5Gain
CESCCervical and endocervical cancers2920.3651.24e-103.146.650.3Gain
COADColon adenocarcinoma4490.4632.99e-259.868.821.4Neutral
ESCAEsophageal carcinoma1830.587.35e-189.843.247Gain
GBMGlioblastoma multiforme1470.2790.0006277.576.216.3Neutral
HNSCHead and Neck squamous cell carcinoma5140.2975.94e-127.265.827Neutral
KIRCKidney renal clear cell carcinoma5250.2441.39e-087.681.510.9Neutral
KIRPKidney renal papillary cell carcinoma2880.1230.03637.386.56.2Neutral
LAMLAcute Myeloid Leukemia1660.0780.321098.21.8Neutral
LGGBrain Lower Grade Glioma5130.1610.0002524.589.75.8Neutral
LIHCLiver hepatocellular carcinoma3640.4372.22e-181.925.872.3Gain
LUADLung adenocarcinoma5120.4131.58e-225.32767.8Gain
LUSCLung squamous cell carcinoma4980.478.58e-296.24350.8Gain
OVOvarian serous cystadenocarcinoma3000.4752.61e-1814.34243.7Gain
PAADPancreatic adenocarcinoma1770.4952.48e-124.565.529.9Neutral
PCPGPheochromocytoma and Paraganglioma1620.3641.95e-069.375.315.4Neutral
PRADProstate adenocarcinoma4910.1951.4e-055.388.46.3Neutral
READRectum adenocarcinoma1640.4644.03e-101159.129.9Neutral
SARCSarcoma2550.2330.00017532.553.314.1Neutral
SKCMSkin Cutaneous Melanoma3670.5661.96e-326.542.551Gain
STADStomach adenocarcinoma4130.4342.27e-205.365.429.3Neutral
TGCTTesticular Germ Cell Tumors1500.4013.64e-074.75045.3Gain
THCAThyroid carcinoma4970.3619e-170.693.85.6Neutral
THYMThymoma1190.1790.0514078.221.8Neutral
UCECUterine Corpus Endometrial Carcinoma5370.3951.67e-213.555.940.6Gain
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Methylation level in the promoter region of CR
> Methylation level in the promoter region of CR
 


  Correlation between expression and methylation as well as differential methylation analysis.
Cancer Full Name R P # N # T Delta beta (T vs N) P value (T vs N) Status
BLCABladder urothelial carcinoma-0.1830.00015617408-0.0010.286NS/NA
BRCABreast invasive carcinoma-0.0720.0331837850.0010.0298NS/NA
CESCCervical and endocervical cancers-0.0430.4463306NANANS/NA
COADColon adenocarcinoma-0.0780.1661929700.891NS/NA
ESCAEsophageal carcinoma-0.1120.1219185NANANS/NA
GBMGlioblastoma multiforme-0.1750.163164NANANS/NA
HNSCHead and Neck squamous cell carcinoma-0.1110.0095120522-0.0080.000531NS/NA
KIRCKidney renal clear cell carcinoma-0.0160.762243190.0010.466NS/NA
KIRPKidney renal papillary cell carcinoma-0.1420.014523275-0.0140.00185NS/NA
LAMLAcute Myeloid Leukemia-0.1010.190170NANANS/NA
LGGBrain Lower Grade Glioma-0.1458e-040530NANANS/NA
LIHCLiver hepatocellular carcinoma-0.2331.8e-0641373-0.0010.00655NS/NA
LUADLung adenocarcinoma-0.0690.13421456-0.0060.134NS/NA
LUSCLung squamous cell carcinoma-0.1190.02048370NANANS/NA
OVOvarian serous cystadenocarcinoma-0.650.066609NANANS/NA
PAADPancreatic adenocarcinoma-0.1120.1314179NANANS/NA
PCPGPheochromocytoma and Paraganglioma-0.1810.01343184NANANS/NA
PRADProstate adenocarcinoma-0.23.42e-0635498-0.0232.97e-08NS/NA
READRectum adenocarcinoma-0.1160.247299NANANS/NA
SARCSarcoma-0.1140.06610263NANANS/NA
SKCMSkin Cutaneous Melanoma-0.2798.31e-101471NANANS/NA
STADStomach adenocarcinoma-0.1460.004790372NANANS/NA
TGCTTesticular Germ Cell Tumors-0.0560.4840156NANANS/NA
THCAThyroid carcinoma-0.0290.4885050900.0195NS/NA
THYMThymoma-0.0650.4762120NANANS/NA
UCECUterine Corpus Endometrial Carcinoma-0.1923.04e-0534431-0.0020.00626NS/NA
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Primary tumor tissue from TCGA
> Normal tumor tissue from HPA
>The Cancer Genome Atlas (TCGA)
 
There is no record.
> The Human Protein Atlas (HPA)
 


Tissue Level Level Name
Adrenal gland 3 High
Appendix 3 High
Bone marrow 1 Low
Breast 2 Medium
Bronchus 2 Medium
Caudate 2 Medium
Cerebellum 2 Medium
Cerebral cortex 2 Medium
Cervix, uterine 3 High
Colon 3 High
Duodenum 3 High
Endometrium 2 Medium
Epididymis 3 High
Esophagus 2 Medium
Fallopian tube 2 Medium
Gallbladder 3 High
Heart muscle 2 Medium
Hippocampus 0 Not detected
Kidney 2 Medium
Liver 2 Medium
Lung 2 Medium
Lymph node 1 Low
Nasopharynx 2 Medium
Oral mucosa 1 Low
Ovary 0 Not detected
Pancreas 2 Medium
Parathyroid gland 3 High
Placenta 3 High
Prostate 2 Medium
Rectum 3 High
Salivary gland 2 Medium
Seminal vesicle 2 Medium
Skeletal muscle 2 Medium
Skin 1 Low
Small intestine 3 High
Smooth muscle 1 Low
Soft tissue 1 Low
Spleen 0 Not detected
Stomach 2 Medium
Testis 3 High
Thyroid gland 3 High
Tonsil 1 Low
Urinary bladder 2 Medium
Vagina 0 Not detected
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Association between expresson and subtype
> Overall survival analysis based on expression
> Association between expresson and stage
> Association between expresson and grade
> Subtype
 


  Association between expresson and subtype.
Cancer Full Name # Patients P Value (Kruskal-Wallis) Association Source
BLCABladder urothelial carcinoma1280.426NS24476821
BRCABreast invasive carcinoma5216.32e-19Significant23000897
COADColon adenocarcinoma1490.00401Significant22810696
GBMGlioblastoma multiforme1570.000649Significant26824661
HNSCHead and Neck squamous cell carcinoma2794.35e-10Significant25631445
KIRPKidney renal papillary cell carcinoma1610.127NS26536169
LGGBrain Lower Grade Glioma5131.99e-19Significant26824661
LUADLung adenocarcinoma2300.0037Significant25079552
LUSCLung squamous cell carcinoma1780.00268Significant22960745
OVOvarian serous cystadenocarcinoma2870.412NS21720365
PRADProstate adenocarcinoma3330.00799Significant26544944
READRectum adenocarcinoma670.00908Significant22810696
SKCMSkin Cutaneous Melanoma3150.000284Significant26091043
STADStomach adenocarcinoma2771.72e-09Significant25079317
THCAThyroid carcinoma3910.0113Significant25417114
UCECUterine Corpus Endometrial Carcinoma2324.75e-11Significant23636398
> Overall survival
 

  Overall survival analysis based on expression.
Cancer Full Name # Patients Hazard Ratio P Value (Log Rank Test) Association
BLCABladder urothelial carcinoma405 1.3620.158NS
BRCABreast invasive carcinoma1079 1.1210.607NS
CESCCervical and endocervical cancers291 3.3870.000496Shorter
COADColon adenocarcinoma439 0.9430.835NS
ESCAEsophageal carcinoma184 1.0680.861NS
GBMGlioblastoma multiforme158 1.1080.698NS
HNSCHead and Neck squamous cell carcinoma518 1.2650.223NS
KIRCKidney renal clear cell carcinoma531 0.6770.0663NS
KIRPKidney renal papillary cell carcinoma287 0.7850.515NS
LAMLAcute Myeloid Leukemia149 0.7550.356NS
LGGBrain Lower Grade Glioma511 3.7991.38e-06Shorter
LIHCLiver hepatocellular carcinoma365 1.0660.807NS
LUADLung adenocarcinoma502 1.1450.506NS
LUSCLung squamous cell carcinoma494 0.9040.611NS
OVOvarian serous cystadenocarcinoma303 0.7860.259NS
PAADPancreatic adenocarcinoma177 1.3750.302NS
PCPGPheochromocytoma and Paraganglioma179 0.9620.978NS
PRADProstate adenocarcinoma497 1.7870.519NS
READRectum adenocarcinoma159 0.6980.518NS
SARCSarcoma259 2.0530.0201Shorter
SKCMSkin Cutaneous Melanoma459 1.3670.111NS
STADStomach adenocarcinoma388 0.9190.706NS
TGCTTesticular Germ Cell Tumors134 0.5950.669NS
THCAThyroid carcinoma500 1.0270.969NS
THYMThymoma119 4.1670.161NS
UCECUterine Corpus Endometrial Carcinoma543 0.5620.0545NS
> Stage
 

  Association between expresson and stage.
Cancer Full Name # Patients R Value (Spearman) P Value (Spearman) Association
BLCABladder urothelial carcinoma406 0.0760.127NS
BRCABreast invasive carcinoma1071 0.0530.0852NS
CESCCervical and endocervical cancers167 0.140.0709NS
COADColon adenocarcinoma445 -0.0120.794NS
ESCAEsophageal carcinoma162 -0.0350.655NS
HNSCHead and Neck squamous cell carcinoma448 -0.0040.924NS
KIRCKidney renal clear cell carcinoma531 -0.0110.796NS
KIRPKidney renal papillary cell carcinoma260 0.0110.854NS
LIHCLiver hepatocellular carcinoma347 0.0110.839NS
LUADLung adenocarcinoma507 0.0410.36NS
LUSCLung squamous cell carcinoma497 -0.0030.952NS
OVOvarian serous cystadenocarcinoma302 -0.0360.53NS
PAADPancreatic adenocarcinoma176 0.0550.469NS
READRectum adenocarcinoma156 -0.0020.976NS
SKCMSkin Cutaneous Melanoma410 -0.0620.213NS
STADStomach adenocarcinoma392 -0.060.233NS
TGCTTesticular Germ Cell Tumors81 -0.2380.0326Lower
THCAThyroid carcinoma499 0.0040.935NS
UCECUterine Corpus Endometrial Carcinoma501 -0.1620.00028Lower
> Grade
 

  Association between expresson and grade.
Cancer Full Name # Patients R Value (Spearman) P Value (Spearman) Association
CESCCervical and endocervical cancers272 0.0820.178NS
HNSCHead and Neck squamous cell carcinoma498 0.0170.707NS
KIRCKidney renal clear cell carcinoma525 -0.0240.585NS
LGGBrain Lower Grade Glioma514 0.1766.18e-05Higher
LIHCLiver hepatocellular carcinoma366 -0.0040.94NS
OVOvarian serous cystadenocarcinoma296 -0.030.606NS
PAADPancreatic adenocarcinoma176 0.140.0632NS
STADStomach adenocarcinoma406 -0.1210.0145Lower
UCECUterine Corpus Endometrial Carcinoma534 -0.2421.59e-08Lower
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Targets inferred by reverse engineering method
> Targets identified by ChIP-seq data
> Targets inferred by reverse engineering method
 
> Targets identified by ChIP-seq data
 
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Drugs from DrugBank database
> Drugs from DrugBank database
 
There is no record for SMYD2.
Summary
SymbolSMYD2
NameSET and MYND domain containing 2
Aliases HSKM-B; ZMYND14; KMT3C; SET and MYND domain-containing protein 2; histone methyltransferase SMYD2; lysine N- ......
Location1q32.3
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Protein-Protein Interaction Network
> miRNA Regulatory Relationship
> Interactions from Text Mining
> Protein-Protein Interaction Network
 
> miRNA Regulatory Relationship
 
> Interactions from Text Mining
 
PMID Cancer Hierarchy Gene Relation to CR Evidence
26826421Head and Neck Squamous Cell Carcinomapartnerp53InteractionIn both nonmultiple and multiple groups, the combination of SMYD2 and p53 immunopositivity was a significant prognostic indicator (P = .027 and .015).
26790435Chronic Lymphocytic LeukemiapartnerSMYD3CorrelationFurthermore, a strong correlation between SMYD2 and SMYD3 gene expression was unveiled. Our data demonstrate the association of a residual expression of SMYD2 and SMYD3 with CLL progression indicators and suggests both genes are regulated by a common transcriptional control in this type of cancer.