CR2Cancer

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Domain, Function and Classification > Gene Ontology > KEGG and Reactome Pathway

> Domain, Function and Classification

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Domain

PF08265 YL1 nuclear protein C-terminal domain

Function

Could be a DNA-binding transcriptional regulator. May be involved in chromatin modification and remodeling.

Classification

Class	Modification	Substrate	Product	PubMed
Histone modification write cofactor	Histone acetylation	#	#	14966270

> Gene Ontology [ TOP ]
Biological Process	GO:0006338 chromatin remodeling GO:0019827 stem cell population maintenance GO:0034728 nucleosome organization GO:0035019 somatic stem cell population maintenance GO:0043044 ATP-dependent chromatin remodeling GO:0043486 histone exchange GO:0071824 protein-DNA complex subunit organization GO:0098727 maintenance of cell number
Molecular Function	-
Cellular Component	-

> KEGG and Reactome Pathway [ TOP ]
KEGG	-
Reactome	R-HSA-3247509: Chromatin modifying enzymes R-HSA-4839726: Chromatin organization R-HSA-3214847: HATs acetylate histones

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Mutation landscape in primary tumor tissue from TCGA > Mutation landscape in cancer cell line from CCLE > All mutations from COSMIC database V81 > Variations from text mining

> The Cancer Genome Atlas (TCGA) [ TOP ]

> Cancer Cell Line Encyclopedia (CCLE) [ TOP ]
There is no record.

> Catalogue of Somatic Mutations in Cancer (COSMIC)

[ TOP ]

COSMIC ID	CDS change	AA change	Mutation Type	Anatomical Site
COSM3473628	c.505C>T	p.Q169*	Substitution - Nonsense	Skin
COSM3473629	c.36C>T	p.T12T	Substitution - coding silent	Skin
COSM4740589	c.312G>T	p.P104P	Substitution - coding silent	Liver
COSM1333945	c.400C>T	p.R134C	Substitution - Missense	Large_intestine
COSM3385163	c.469C>T	p.R157W	Substitution - Missense	Pancreas
COSM4846116	c.1055C>T	p.S352F	Substitution - Missense	Cervix
COSM895733	c.389G>A	p.R130Q	Substitution - Missense	Endometrium
COSM2157190	c.1035T>A	p.P345P	Substitution - coding silent	Central_nervous_system
COSM3965797	c.312G>A	p.P104P	Substitution - coding silent	Central_nervous_system
COSM895731	c.762C>T	p.P254P	Substitution - coding silent	Large_intestine
COSM5885717	c.851C>T	p.P284L	Substitution - Missense	Urinary_tract
COSM3965797	c.312G>A	p.P104P	Substitution - coding silent	Large_intestine
COSM675482	c.423A>G	p.T141T	Substitution - coding silent	Lung
COSM5006998	c.905G>A	p.R302Q	Substitution - Missense	Large_intestine
COSM895730	c.846G>A	p.R282R	Substitution - coding silent	Endometrium
COSM2183191	c.638C>T	p.T213I	Substitution - Missense	Large_intestine
COSM3862660	c.604C>T	p.H202Y	Substitution - Missense	Skin
COSM1317684	c.370G>C	p.D124H	Substitution - Missense	Haematopoietic_and_lymphoid_tissue
COSM5438383	c.516G>T	p.L172L	Substitution - coding silent	Oesophagus
COSM1600787	c.1067C>T	p.A356V	Substitution - Missense	Liver
COSM5605328	c.435C>T	p.F145F	Substitution - coding silent	Skin
COSM4550770	c.508G>A	p.E170K	Substitution - Missense	Skin
COSM1600787	c.1067C>T	p.A356V	Substitution - Missense	Liver
COSM4740588	c.964G>A	p.A322T	Substitution - Missense	Large_intestine
COSM5635722	c.303C>G	p.V101V	Substitution - coding silent	Oesophagus
COSM4408661	c.375C>T	p.D125D	Substitution - coding silent	Oesophagus
COSM4428762	c.1008C>T	p.A336A	Substitution - coding silent	Oesophagus
COSM2183194	c.563-1G>A	p.?	Unknown	Cervix
COSM316483	c.453G>A	p.R151R	Substitution - coding silent	Lung
COSM1270302	c.1073G>A	p.R358H	Substitution - Missense	Oesophagus
COSM3801806	c.822C>T	p.F274F	Substitution - coding silent	Breast
COSM895731	c.762C>T	p.P254P	Substitution - coding silent	Endometrium
COSM3724151	c.615G>A	p.R205R	Substitution - coding silent	Upper_aerodigestive_tract
COSM1600787	c.1067C>T	p.A356V	Substitution - Missense	Liver
COSM3399693	c.83A>G	p.E28G	Substitution - Missense	Central_nervous_system
COSM1333943	c.682A>G	p.K228E	Substitution - Missense	Large_intestine
COSM1333947	c.150G>A	p.Q50Q	Substitution - coding silent	Large_intestine
COSM3355892	c.118-5C>T	p.?	Unknown	Breast
COSM895732	c.541G>T	p.E181*	Substitution - Nonsense	Endometrium
COSM4837567	c.1047C>A	p.L349L	Substitution - coding silent	Cervix
COSM4740589	c.312G>T	p.P104P	Substitution - coding silent	Large_intestine
COSM3376713	c.948C>A	p.F316L	Substitution - Missense	Pancreas
COSM4400588	c.894A>G	p.P298P	Substitution - coding silent	Skin
COSM1600787	c.1067C>T	p.A356V	Substitution - Missense	Liver
COSM83927	c.941G>A	p.R314Q	Substitution - Missense	Pancreas
COSM1333944	c.473G>A	p.R158Q	Substitution - Missense	Large_intestine
COSM378889	c.847C>G	p.P283A	Substitution - Missense	Lung
COSM130177	c.788G>A	p.R263H	Substitution - Missense	Upper_aerodigestive_tract
COSM3934087	c.248G>A	p.R83Q	Substitution - Missense	Oesophagus
COSM5914834	c.836C>T	p.P279L	Substitution - Missense	Skin
COSM2183191	c.638C>T	p.T213I	Substitution - Missense	Large_intestine
COSM3355892	c.118-5C>T	p.?	Unknown	Breast
COSM5429138	c.46C>A	p.R16R	Substitution - coding silent	Oesophagus
COSM1333946	c.244C>T	p.R82C	Substitution - Missense	Large_intestine
COSM233750	c.884C>T	p.T295I	Substitution - Missense	Skin
COSM2183183	c.954C>T	p.I318I	Substitution - coding silent	Skin
COSM5803370	c.1064G>T	p.R355L	Substitution - Missense	Liver
COSM32481	c.952A>G	p.I318V	Substitution - Missense	Breast
COSM5986983	c.843G>C	p.G281G	Substitution - coding silent	Salivary_gland
COSM458603	c.218G>C	p.G73A	Substitution - Missense	Cervix
COSM1742553	c.270+6G>C	p.?	Unknown	Urinary_tract
COSM2157190	c.1035T>A	p.P345P	Substitution - coding silent	Central_nervous_system
COSM4428763	c.1007C>A	p.A336D	Substitution - Missense	Oesophagus
COSM1270302	c.1073G>A	p.R358H	Substitution - Missense	Stomach
COSM137783	c.436C>T	p.L146F	Substitution - Missense	Skin
COSM4560779	c.823G>A	p.E275K	Substitution - Missense	Skin
COSM4576253	c.323C>T	p.S108F	Substitution - Missense	Bone
COSM3934087	c.248G>A	p.R83Q	Substitution - Missense	Large_intestine
COSM5377587	c.770C>T	p.P257L	Substitution - Missense	Skin
COSM3376714	c.574C>T	p.R192W	Substitution - Missense	Pancreas
COSM423810	c.70G>A	p.E24K	Substitution - Missense	Breast
COSM3671392	c.521G>T	p.R174L	Substitution - Missense	Prostate

> Text Mining based Variations [ TOP ]
There is no record for VPS72.

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Post-translational modification (PTM)

> Post-translational modification (PTM)

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Filter By:

Uniprot ID	Position	Amino Acid	Description	Upstream Enzyme	Affected By Mutation	Amino Acid Sequence Variant
Q15906	129	S	Phosphoserine	-	No	None detected

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Expression analysis in primary tumor tissue from TCGA > Expression level in cancer cell line from CCLE > Expression level in human normal tissue from HPA > Text mining based expression change

> The Cancer Genome Atlas (TCGA)

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Differential expression analysis for cancers with more than 10 normal samples

Cancer	Full Name	# N	# T	Median (N)	Median (T)	LogFC	Adj. P	Status
BLCA	Bladder urothelial carcinoma	19	408	5.456	5.924	0.395	0.00629	NS
BRCA	Breast invasive carcinoma	112	1100	4.991	5.843	0.88	7.23e-46	Over
CESC	Cervical and endocervical cancers	3	306	5.683	5.862	NA	NA	NA
COAD	Colon adenocarcinoma	41	459	5.057	5.51	0.47	1.45e-13	NS
ESCA	Esophageal carcinoma	11	185	4.777	5.277	0.528	0.00188	NS
GBM	Glioblastoma multiforme	5	166	5.37	5.939	NA	NA	NA
HNSC	Head and Neck squamous cell carcinoma	44	522	5.012	5.349	0.316	4.14e-06	NS
KIRC	Kidney renal clear cell carcinoma	72	534	4.999	5.084	0.111	0.014	NS
KIRP	Kidney renal papillary cell carcinoma	32	291	5.119	5.302	0.165	0.022	NS
LAML	Acute Myeloid Leukemia	0	173	NA	5.203	NA	NA	NA
LGG	Brain Lower Grade Glioma	0	530	NA	6.178	NA	NA	NA
LIHC	Liver hepatocellular carcinoma	50	373	4.078	5.138	1.005	1.6e-24	Over
LUAD	Lung adenocarcinoma	59	517	4.994	5.896	0.89	2.2e-27	Over
LUSC	Lung squamous cell carcinoma	51	501	4.909	5.753	0.859	1.31e-25	Over
OV	Ovarian serous cystadenocarcinoma	0	307	NA	6.58	NA	NA	NA
PAAD	Pancreatic adenocarcinoma	4	179	5.125	5.365	NA	NA	NA
PCPG	Pheochromocytoma and Paraganglioma	3	184	5.331	5.47	NA	NA	NA
PRAD	Prostate adenocarcinoma	52	498	5.431	5.614	0.222	1.62e-05	NS
READ	Rectum adenocarcinoma	10	167	5.049	5.631	0.6	1.15e-05	Over
SARC	Sarcoma	2	263	5.449	5.601	NA	NA	NA
SKCM	Skin Cutaneous Melanoma	1	472	5.78	5.8	NA	NA	NA
STAD	Stomach adenocarcinoma	35	415	5.34	5.459	0.2	0.0501	NS
TGCT	Testicular Germ Cell Tumors	0	156	NA	5.982	NA	NA	NA
THCA	Thyroid carcinoma	59	509	5.207	5.431	0.258	4.99e-10	NS
THYM	Thymoma	2	120	5.395	5.934	NA	NA	NA
UCEC	Uterine Corpus Endometrial Carcinoma	35	546	5.554	6.096	0.62	3.07e-10	Over

> Cancer Cell Line Encyclopedia (CCLE)

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Tissue	Cell Line	Expression Level (Microarray)
Autonomic ganglia	CHP126	11
Autonomic ganglia	CHP212	10.9
Autonomic ganglia	IMR32	11.2
Autonomic ganglia	KELLY	10.9
Autonomic ganglia	KPNRTBM1	10.4
Autonomic ganglia	KPNSI9S	10.7
Autonomic ganglia	KPNYN	10.3
Autonomic ganglia	MHHNB11	11.1
Autonomic ganglia	NB1	11.8
Autonomic ganglia	NH6	10.6
Autonomic ganglia	SHSY5Y	10.8
Autonomic ganglia	SIMA	10.5
Autonomic ganglia	SKNAS	11
Autonomic ganglia	SKNBE2	10.8
Autonomic ganglia	SKNDZ	11.1
Autonomic ganglia	SKNFI	10.5
Autonomic ganglia	SKNSH	10.1
Biliary tract	HUCCT1	9.9
Biliary tract	HUH28	9.8
Biliary tract	SNU1079	10.3
Biliary tract	SNU1196	10.7
Biliary tract	SNU245	10.3
Biliary tract	SNU308	10
Biliary tract	SNU478	10.2
Bone	143B	10.6
Bone	A673	10.5
Bone	CADOES1	10.1
Bone	CAL78	9.7
Bone	G292CLONEA141B1	10.3
Bone	HOS	11.1
Bone	HS706T	9.2
Bone	HS737T	9.3
Bone	HS819T	9.3
Bone	HS821T	9.2
Bone	HS822T	9.1
Bone	HS863T	9.4
Bone	HS870T	9.2
Bone	HS888T	9.4
Bone	MG63	9.7
Bone	MHHES1	10.3
Bone	OUMS27	9.6
Bone	RDES	11.4
Bone	SJSA1	9.7
Bone	SKES1	11
Bone	SKNMC	10.6
Bone	SW1353	9.4
Bone	T173	9.2
Bone	TC71	10.4
Bone	U2OS	10.2
Breast	AU565	10.4
Breast	BT20	9.9
Breast	BT474	9.6
Breast	BT483	11.1
Breast	BT549	10.4
Breast	CAL120	9.5
Breast	CAL148	11.4
Breast	CAL51	9.9
Breast	CAL851	10.1
Breast	CAMA1	10.7
Breast	DU4475	10.7
Breast	EFM192A	10.2
Breast	EFM19	10.4
Breast	EVSAT	9.9
Breast	HCC1143	10
Breast	HCC1187	11.7
Breast	HCC1395	10.2
Breast	HCC1419	9.6
Breast	HCC1428	10.2
Breast	HCC1500	10.4
Breast	HCC1569	10.1
Breast	HCC1599	11.3
Breast	HCC1806	9.6
Breast	HCC1937	8.9
Breast	HCC1954	10.2
Breast	HCC202	10.8
Breast	HCC2157	10.8
Breast	HCC2218	11.2
Breast	HCC38	9.6
Breast	HCC70	10.4
Breast	HDQP1	10.2
Breast	HMC18	10.2
Breast	HS274T	9.1
Breast	HS281T	9.2
Breast	HS343T	9.2
Breast	HS578T	9.3
Breast	HS606T	9.4
Breast	HS739T	9.3
Breast	HS742T	9
Breast	JIMT1	10
Breast	KPL1	10.9
Breast	MCF7	10.7
Breast	MDAMB134VI	10.2
Breast	MDAMB157	9.2
Breast	MDAMB175VII	10.4
Breast	MDAMB231	9.8
Breast	MDAMB361	9.9
Breast	MDAMB415	9.4
Breast	MDAMB436	11
Breast	MDAMB453	10.4
Breast	MDAMB468	10.4
Breast	SKBR3	10.5
Breast	T47D	10.5
Breast	UACC812	11.1
Breast	UACC893	10.1
Breast	YMB1	11
Breast	ZR751	10.6
Breast	ZR7530	10.6
Central nervous system	1321N1	10.3
Central nervous system	42MGBA	9.5
Central nervous system	8MGBA	9.8
Central nervous system	A172	11
Central nervous system	AM38	9.9
Central nervous system	BECKER	10.1
Central nervous system	CAS1	9.6
Central nervous system	CCFSTTG1	9.4
Central nervous system	D283MED	11.3
Central nervous system	D341MED	10.7
Central nervous system	DAOY	9.9
Central nervous system	DBTRG05MG	9.3
Central nervous system	DKMG	9
Central nervous system	GAMG	9
Central nervous system	GB1	10
Central nervous system	GI1	10.2
Central nervous system	GMS10	9.4
Central nervous system	GOS3	9.7
Central nervous system	H4	9.9
Central nervous system	HS683	9.4
Central nervous system	KALS1	9.7
Central nervous system	KG1C	9.4
Central nervous system	KNS42	10.7
Central nervous system	KNS60	9.7
Central nervous system	KNS81	9.5
Central nervous system	KS1	9.6
Central nervous system	LN18	9.5
Central nervous system	LN229	10.1
Central nervous system	M059K	10.2
Central nervous system	MOGGCCM	9.9
Central nervous system	MOGGUVW	10.2
Central nervous system	NMCG1	9.6
Central nervous system	ONS76	9.8
Central nervous system	SF126	8.6
Central nervous system	SF295	9.8
Central nervous system	SNB19	9.7
Central nervous system	SNU1105	9.1
Central nervous system	SNU201	9.3
Central nervous system	SNU466	9.6
Central nervous system	SNU489	9.7
Central nervous system	SNU626	9.6
Central nervous system	SNU738	9.6
Central nervous system	SW1088	9.3
Central nervous system	SW1783	9.4
Central nervous system	T98G	10
Central nervous system	TM31	10.2
Central nervous system	U118MG	9.4
Central nervous system	U138MG	9.5
Central nervous system	U251MG	9.8
Central nervous system	U87MG	9.9
Central nervous system	YH13	10.1
Central nervous system	YKG1	10
Endometrium	AN3CA	10.5
Endometrium	COLO684	10.6
Endometrium	EFE184	10.6
Endometrium	EN	10.4
Endometrium	ESS1	9.7
Endometrium	HEC108	9.2
Endometrium	HEC151	9.7
Endometrium	HEC1A	9.8
Endometrium	HEC1B	9.9
Endometrium	HEC251	9.6
Endometrium	HEC265	9.5
Endometrium	HEC50B	9.8
Endometrium	HEC59	9.6
Endometrium	HEC6	10.2
Endometrium	ISHIKAWAHERAKLIO02ER	9.6
Endometrium	JHUEM1	10
Endometrium	JHUEM2	10.3
Endometrium	JHUEM3	9.5
Endometrium	KLE	10.4
Endometrium	MFE280	11.2
Endometrium	MFE296	9.8
Endometrium	MFE319	9.9
Endometrium	RL952	10
Endometrium	SNGM	10.5
Endometrium	SNU1077	10.3
Endometrium	SNU685	10.6
Endometrium	TEN	9.5
Haematopoietic and lymphoid	697	10.2
Haematopoietic and lymphoid	A3KAW	10.5
Haematopoietic and lymphoid	A4FUK	9.8
Haematopoietic and lymphoid	ALLSIL	10.1
Haematopoietic and lymphoid	AML193	9.6
Haematopoietic and lymphoid	AMO1	11
Haematopoietic and lymphoid	BCP1	10.2
Haematopoietic and lymphoid	BDCM	9.6
Haematopoietic and lymphoid	BL41	11.1
Haematopoietic and lymphoid	BL70	10.3
Haematopoietic and lymphoid	BV173	10.3
Haematopoietic and lymphoid	CA46	10.8
Haematopoietic and lymphoid	CI1	9.9
Haematopoietic and lymphoid	CMK115	10
Haematopoietic and lymphoid	CMK86	10.2
Haematopoietic and lymphoid	CMK	10.3
Haematopoietic and lymphoid	CMLT1	9.4
Haematopoietic and lymphoid	COLO775	10.7
Haematopoietic and lymphoid	DAUDI	9.5
Haematopoietic and lymphoid	DB	10.6
Haematopoietic and lymphoid	DEL	10.1
Haematopoietic and lymphoid	DND41	10.4
Haematopoietic and lymphoid	DOHH2	9.7
Haematopoietic and lymphoid	EB1	10.4
Haematopoietic and lymphoid	EB2	10.6
Haematopoietic and lymphoid	EHEB	9.8
Haematopoietic and lymphoid	EJM	9.7
Haematopoietic and lymphoid	EM2	9.8
Haematopoietic and lymphoid	EOL1	10.1
Haematopoietic and lymphoid	F36P	10.2
Haematopoietic and lymphoid	GA10	10.8
Haematopoietic and lymphoid	GDM1	10.1
Haematopoietic and lymphoid	GRANTA519	10
Haematopoietic and lymphoid	HDLM2	9.6
Haematopoietic and lymphoid	HDMYZ	10.6
Haematopoietic and lymphoid	HEL9217	10.3
Haematopoietic and lymphoid	HEL	10.2
Haematopoietic and lymphoid	HH	10
Haematopoietic and lymphoid	HL60	10
Haematopoietic and lymphoid	HPBALL	10.3
Haematopoietic and lymphoid	HS604T	9.6
Haematopoietic and lymphoid	HS611T	9.7
Haematopoietic and lymphoid	HS616T	9.2
Haematopoietic and lymphoid	HS751T	9.1
Haematopoietic and lymphoid	HT	9.7
Haematopoietic and lymphoid	HTK	11.1
Haematopoietic and lymphoid	HUNS1	10.2
Haematopoietic and lymphoid	HUT102	9.5
Haematopoietic and lymphoid	HUT78	9.9
Haematopoietic and lymphoid	JEKO1	10.6
Haematopoietic and lymphoid	JK1	10.4
Haematopoietic and lymphoid	JM1	11
Haematopoietic and lymphoid	JURKAT	10.3
Haematopoietic and lymphoid	JURLMK1	10.4
Haematopoietic and lymphoid	JVM2	9.2
Haematopoietic and lymphoid	JVM3	9.8
Haematopoietic and lymphoid	K562	10.3
Haematopoietic and lymphoid	KARPAS299	11.1
Haematopoietic and lymphoid	KARPAS422	10
Haematopoietic and lymphoid	KARPAS620	10.2
Haematopoietic and lymphoid	KASUMI1	9.8
Haematopoietic and lymphoid	KASUMI2	10.1
Haematopoietic and lymphoid	KASUMI6	9.9
Haematopoietic and lymphoid	KCL22	10.5
Haematopoietic and lymphoid	KE37	9.7
Haematopoietic and lymphoid	KE97	9.7
Haematopoietic and lymphoid	KG1	10
Haematopoietic and lymphoid	KHM1B	11.5
Haematopoietic and lymphoid	KIJK	10.6
Haematopoietic and lymphoid	KMH2	10
Haematopoietic and lymphoid	KMM1	10.5
Haematopoietic and lymphoid	KMS11	11.4
Haematopoietic and lymphoid	KMS12BM	10.3
Haematopoietic and lymphoid	KMS18	9.7
Haematopoietic and lymphoid	KMS20	11.3
Haematopoietic and lymphoid	KMS21BM	10.2
Haematopoietic and lymphoid	KMS26	9.7
Haematopoietic and lymphoid	KMS27	10.6
Haematopoietic and lymphoid	KMS28BM	10.3
Haematopoietic and lymphoid	KMS34	9.9
Haematopoietic and lymphoid	KO52	9.9
Haematopoietic and lymphoid	KOPN8	10.8
Haematopoietic and lymphoid	KU812	10.4
Haematopoietic and lymphoid	KYO1	10.7
Haematopoietic and lymphoid	L1236	10.3
Haematopoietic and lymphoid	L363	10.4
Haematopoietic and lymphoid	L428	9.6
Haematopoietic and lymphoid	L540	9.9
Haematopoietic and lymphoid	LAMA84	10.1
Haematopoietic and lymphoid	LOUCY	9.8
Haematopoietic and lymphoid	LP1	11.4
Haematopoietic and lymphoid	M07E	10.2
Haematopoietic and lymphoid	MC116	10.8
Haematopoietic and lymphoid	ME1	11
Haematopoietic and lymphoid	MEC1	9.2
Haematopoietic and lymphoid	MEC2	9.5
Haematopoietic and lymphoid	MEG01	9.8
Haematopoietic and lymphoid	MHHCALL2	9.8
Haematopoietic and lymphoid	MHHCALL3	10.2
Haematopoietic and lymphoid	MHHCALL4	10.3
Haematopoietic and lymphoid	MINO	10.2
Haematopoietic and lymphoid	MJ	10.2
Haematopoietic and lymphoid	MM1S	10.3
Haematopoietic and lymphoid	MOLM13	10.1
Haematopoietic and lymphoid	MOLM16	10.2
Haematopoietic and lymphoid	MOLM6	11
Haematopoietic and lymphoid	MOLP2	10.4
Haematopoietic and lymphoid	MOLP8	10.2
Haematopoietic and lymphoid	MOLT13	9.9
Haematopoietic and lymphoid	MOLT16	9.8
Haematopoietic and lymphoid	MOLT4	10.2
Haematopoietic and lymphoid	MONOMAC1	10
Haematopoietic and lymphoid	MONOMAC6	10.1
Haematopoietic and lymphoid	MOTN1	10.1
Haematopoietic and lymphoid	MUTZ5	10.4
Haematopoietic and lymphoid	MV411	9.8
Haematopoietic and lymphoid	NALM19	10.4
Haematopoietic and lymphoid	NALM1	10.1
Haematopoietic and lymphoid	NALM6	10.1
Haematopoietic and lymphoid	NAMALWA	10.3
Haematopoietic and lymphoid	NB4	9.6
Haematopoietic and lymphoid	NCIH929	10.6
Haematopoietic and lymphoid	NCO2	9.7
Haematopoietic and lymphoid	NOMO1	9.5
Haematopoietic and lymphoid	NUDHL1	10.6
Haematopoietic and lymphoid	NUDUL1	10.2
Haematopoietic and lymphoid	OCIAML2	10
Haematopoietic and lymphoid	OCIAML3	11.1
Haematopoietic and lymphoid	OCIAML5	10.5
Haematopoietic and lymphoid	OCILY10	10.1
Haematopoietic and lymphoid	OCILY19	10.5
Haematopoietic and lymphoid	OCILY3	10
Haematopoietic and lymphoid	OCIM1	9.8
Haematopoietic and lymphoid	OPM2	11.2
Haematopoietic and lymphoid	P12ICHIKAWA	10
Haematopoietic and lymphoid	P31FUJ	9.8
Haematopoietic and lymphoid	P3HR1	9.8
Haematopoietic and lymphoid	PCM6	10.2
Haematopoietic and lymphoid	PEER	9.8
Haematopoietic and lymphoid	PF382	9.7
Haematopoietic and lymphoid	PFEIFFER	9.6
Haematopoietic and lymphoid	PL21	10.2
Haematopoietic and lymphoid	RAJI	9.8
Haematopoietic and lymphoid	RCHACV	10.5
Haematopoietic and lymphoid	REC1	10.8
Haematopoietic and lymphoid	REH	10.1
Haematopoietic and lymphoid	RI1	10.2
Haematopoietic and lymphoid	RL	10
Haematopoietic and lymphoid	RPMI8226	10.4
Haematopoietic and lymphoid	RPMI8402	10.3
Haematopoietic and lymphoid	RS411	10.3
Haematopoietic and lymphoid	SEM	10.4
Haematopoietic and lymphoid	SET2	10.3
Haematopoietic and lymphoid	SIGM5	10.2
Haematopoietic and lymphoid	SKM1	10.5
Haematopoietic and lymphoid	SKMM2	10.1
Haematopoietic and lymphoid	SR786	10.3
Haematopoietic and lymphoid	ST486	11
Haematopoietic and lymphoid	SUDHL10	11.3
Haematopoietic and lymphoid	SUDHL1	10.1
Haematopoietic and lymphoid	SUDHL4	10.2
Haematopoietic and lymphoid	SUDHL5	9.8
Haematopoietic and lymphoid	SUDHL6	10.1
Haematopoietic and lymphoid	SUDHL8	10.6
Haematopoietic and lymphoid	SUPB15	10.3
Haematopoietic and lymphoid	SUPHD1	9.9
Haematopoietic and lymphoid	SUPM2	9.7
Haematopoietic and lymphoid	SUPT11	9.9
Haematopoietic and lymphoid	SUPT1	10
Haematopoietic and lymphoid	TALL1	9.9
Haematopoietic and lymphoid	TF1	9.8
Haematopoietic and lymphoid	THP1	10.5
Haematopoietic and lymphoid	TO175T	9
Haematopoietic and lymphoid	TOLEDO	10.7
Haematopoietic and lymphoid	U266B1	10.1
Haematopoietic and lymphoid	U937	10.1
Haematopoietic and lymphoid	UT7	10.1
Haematopoietic and lymphoid	WSUDLCL2	10
Kidney	769P	9.5
Kidney	786O	10
Kidney	A498	10
Kidney	A704	9.4
Kidney	ACHN	9.9
Kidney	BFTC909	9.4
Kidney	CAKI1	10.3
Kidney	CAKI2	10.4
Kidney	CAL54	9.7
Kidney	KMRC1	9.6
Kidney	KMRC20	10
Kidney	KMRC2	9.9
Kidney	KMRC3	9.6
Kidney	OSRC2	9.9
Kidney	RCC10RGB	9.3
Kidney	SNU1272	10.2
Kidney	SNU349	9.4
Kidney	TUHR10TKB	10
Kidney	TUHR14TKB	9.9
Kidney	TUHR4TKB	10.1
Kidney	VMRCRCW	9.8
Kidney	VMRCRCZ	9.4
Large intestine	C2BBE1	10.1
Large intestine	CCK81	10.2
Large intestine	CL11	9.8
Large intestine	CL14	10.3
Large intestine	CL34	9.6
Large intestine	CL40	9.9
Large intestine	COLO205	9.9
Large intestine	COLO320	11.1
Large intestine	COLO678	10.6
Large intestine	CW2	10.3
Large intestine	DLD1	9.8
Large intestine	GP2D	9.8
Large intestine	HCC56	10.4
Large intestine	HCT116	10.1
Large intestine	HCT15	10.2
Large intestine	HS675T	9.5
Large intestine	HS698T	9.3
Large intestine	HT115	9.7
Large intestine	HT29	10.1
Large intestine	HT55	10
Large intestine	KM12	9.7
Large intestine	LOVO	9.5
Large intestine	LS1034	9.9
Large intestine	LS123	9.9
Large intestine	LS180	9.9
Large intestine	LS411N	9.6
Large intestine	LS513	9.8
Large intestine	MDST8	10.4
Large intestine	NCIH508	9.8
Large intestine	NCIH716	10.1
Large intestine	NCIH747	10.2
Large intestine	OUMS23	10.1
Large intestine	RCM1	9.7
Large intestine	RKO	9.4
Large intestine	SKCO1	10.1
Large intestine	SNU1040	9.8
Large intestine	SNU1197	10
Large intestine	SNU175	9.7
Large intestine	SNU283	10
Large intestine	SNU407	11.2
Large intestine	SNU503	10
Large intestine	SNU61	10.2
Large intestine	SNU81	9.8
Large intestine	SNUC1	9.9
Large intestine	SNUC2A	9.6
Large intestine	SNUC4	9.7
Large intestine	SNUC5	9.6
Large intestine	SW1116	9.2
Large intestine	SW1417	9.7
Large intestine	SW1463	9.7
Large intestine	SW403	10.2
Large intestine	SW480	9.6
Large intestine	SW48	9.9
Large intestine	SW620	9.7
Large intestine	SW837	9.8
Large intestine	SW948	9.8
Large intestine	T84	10
Liver	ALEXANDERCELLS	9.7
Liver	C3A	9.6
Liver	HEP3B217	10.3
Liver	HEPG2	9.4
Liver	HLE	9.6
Liver	HLF	10
Liver	HUH1	10.7
Liver	HUH6	10
Liver	HUH7	9.6
Liver	JHH1	10.1
Liver	JHH2	10.2
Liver	JHH4	10.2
Liver	JHH5	10.5
Liver	JHH6	9.5
Liver	JHH7	10
Liver	LI7	9.9
Liver	PLCPRF5	10
Liver	SKHEP1	9.8
Liver	SNU182	10
Liver	SNU387	9.9
Liver	SNU398	10.4
Liver	SNU423	10.2
Liver	SNU449	10.5
Liver	SNU475	10.8
Liver	SNU761	10.3
Liver	SNU878	9.4
Liver	SNU886	10
Lung	A549	9.9
Lung	ABC1	10.2
Lung	BEN	10.4
Lung	CAL12T	10.3
Lung	CALU1	9.8
Lung	CALU3	10
Lung	CALU6	9.9
Lung	CHAGOK1	10.6
Lung	COLO668	9.8
Lung	COLO699	10.1
Lung	CORL105	9.8
Lung	CORL23	9.9
Lung	CORL24	9.7
Lung	CORL279	11.1
Lung	CORL311	10.6
Lung	CORL47	10
Lung	CORL51	10.4
Lung	CORL88	10.4
Lung	CORL95	9.9
Lung	CPCN	9.3
Lung	DMS114	11.3
Lung	DMS153	10.7
Lung	DMS273	13.4
Lung	DMS454	10.1
Lung	DMS53	9.7
Lung	DMS79	10.6
Lung	DV90	9.7
Lung	EBC1	9.4
Lung	EPLC272H	9.9
Lung	HARA	10
Lung	HCC1171	10.9
Lung	HCC1195	10.9
Lung	HCC15	9.7
Lung	HCC2279	8.9
Lung	HCC2935	9.9
Lung	HCC33	10.2
Lung	HCC366	9.5
Lung	HCC4006	9.7
Lung	HCC44	10
Lung	HCC78	10.2
Lung	HCC827	9.7
Lung	HCC95	9.2
Lung	HLC1	10.2
Lung	HLFA	9.5
Lung	HS229T	9.5
Lung	HS618T	9.6
Lung	IALM	10.7
Lung	KNS62	10.2
Lung	LC1F	10.2
Lung	LC1SQSF	9.8
Lung	LCLC103H	10.1
Lung	LCLC97TM1	10.6
Lung	LK2	12.1
Lung	LOUNH91	9.9
Lung	LU65	10.2
Lung	LU99	10.2
Lung	LUDLU1	10.4
Lung	LXF289	10.5
Lung	MORCPR	11
Lung	NCIH1048	10.4
Lung	NCIH1092	9.9
Lung	NCIH1105	10.4
Lung	NCIH1155	10
Lung	NCIH1184	10.7
Lung	NCIH1299	10.1
Lung	NCIH1339	11.1
Lung	NCIH1341	10.3
Lung	NCIH1355	10.5
Lung	NCIH1373	10
Lung	NCIH1385	10.5
Lung	NCIH1395	11.6
Lung	NCIH1435	10
Lung	NCIH1436	10
Lung	NCIH1437	11.5
Lung	NCIH146	10.6
Lung	NCIH1563	9.6
Lung	NCIH1568	10.9
Lung	NCIH1573	10
Lung	NCIH1581	10.7
Lung	NCIH1618	10.4
Lung	NCIH1623	11.3
Lung	NCIH1648	9
Lung	NCIH1650	9.5
Lung	NCIH1651	10.4
Lung	NCIH1666	10.3
Lung	NCIH1693	10
Lung	NCIH1694	10.6
Lung	NCIH1703	10.7
Lung	NCIH1734	10.8
Lung	NCIH1755	9.8
Lung	NCIH1781	10.3
Lung	NCIH1792	10.2
Lung	NCIH1793	9.6
Lung	NCIH1836	10
Lung	NCIH1838	10.5
Lung	NCIH1869	10.4
Lung	NCIH1876	11.5
Lung	NCIH1915	9.8
Lung	NCIH1930	10.5
Lung	NCIH1944	9.7
Lung	NCIH1963	11.2
Lung	NCIH196	10.4
Lung	NCIH1975	10.3
Lung	NCIH2009	10.5
Lung	NCIH2023	9.9
Lung	NCIH2029	10
Lung	NCIH2030	10.3
Lung	NCIH2066	10.1
Lung	NCIH2081	10.2
Lung	NCIH2085	10.2
Lung	NCIH2087	10.5
Lung	NCIH209	10.4
Lung	NCIH2106	10.7
Lung	NCIH2110	10.7
Lung	NCIH211	9.8
Lung	NCIH2122	10.3
Lung	NCIH2126	11
Lung	NCIH2141	10.8
Lung	NCIH2170	10.6
Lung	NCIH2171	10.6
Lung	NCIH2172	9.3
Lung	NCIH2196	10.3
Lung	NCIH2227	10
Lung	NCIH2228	10.2
Lung	NCIH226	9.6
Lung	NCIH2286	9.8
Lung	NCIH2291	9.9
Lung	NCIH2342	10.2
Lung	NCIH2347	10
Lung	NCIH23	10.7
Lung	NCIH2405	9.5
Lung	NCIH2444	10.2
Lung	NCIH292	9.2
Lung	NCIH322	9.8
Lung	NCIH3255	9.6
Lung	NCIH358	10.7
Lung	NCIH441	9.9
Lung	NCIH446	10.4
Lung	NCIH460	10.4
Lung	NCIH510	10
Lung	NCIH520	10.4
Lung	NCIH522	10.9
Lung	NCIH524	9.9
Lung	NCIH526	11.5
Lung	NCIH596	9.8
Lung	NCIH647	10.5
Lung	NCIH650	9.3
Lung	NCIH661	9.7
Lung	NCIH69	10
Lung	NCIH727	9.9
Lung	NCIH810	11.4
Lung	NCIH82	10.8
Lung	NCIH838	10.1
Lung	NCIH841	10.9
Lung	NCIH854	10.2
Lung	NCIH889	10.5
Lung	PC14	9.5
Lung	RERFLCAD1	9.4
Lung	RERFLCAD2	10
Lung	RERFLCAI	10.5
Lung	RERFLCKJ	10.9
Lung	RERFLCMS	9.7
Lung	RERFLCSQ1	9.6
Lung	SBC5	10.6
Lung	SCLC21H	10.4
Lung	SHP77	10.9
Lung	SKLU1	9.6
Lung	SKMES1	10
Lung	SQ1	10.3
Lung	SW1271	9.6
Lung	SW1573	9.9
Lung	SW900	10.6
Lung	VMRCLCD	10.2
Lung	VMRCLCP	10
Oesophagus	COLO680N	9.8
Oesophagus	ECGI10	10.6
Oesophagus	KYSE140	9.8
Oesophagus	KYSE150	10.1
Oesophagus	KYSE180	9.8
Oesophagus	KYSE270	9.8
Oesophagus	KYSE30	10.4
Oesophagus	KYSE410	10
Oesophagus	KYSE450	10.8
Oesophagus	KYSE510	10.4
Oesophagus	KYSE520	9.9
Oesophagus	KYSE70	9.6
Oesophagus	OE19	10.6
Oesophagus	OE33	9.1
Oesophagus	TE10	9.6
Oesophagus	TE11	10.1
Oesophagus	TE14	10.3
Oesophagus	TE15	10.2
Oesophagus	TE1	10.4
Oesophagus	TE4	10.4
Oesophagus	TE5	9.6
Oesophagus	TE6	9.8
Oesophagus	TE8	9.5
Oesophagus	TE9	9.9
Oesophagus	TT	10
Ovary	59M	10.3
Ovary	A2780	10.6
Ovary	CAOV3	10.3
Ovary	CAOV4	11.9
Ovary	COLO704	10.4
Ovary	COV318	10.4
Ovary	COV362	10.6
Ovary	COV434	9.6
Ovary	COV504	10.6
Ovary	COV644	10.2
Ovary	EFO21	10.8
Ovary	EFO27	9.8
Ovary	ES2	10.3
Ovary	FUOV1	10.4
Ovary	HEYA8	10
Ovary	HS571T	9.4
Ovary	IGROV1	10.5
Ovary	JHOC5	10.4
Ovary	JHOM1	9.4
Ovary	JHOM2B	9.5
Ovary	JHOS2	10.2
Ovary	JHOS4	10.3
Ovary	KURAMOCHI	10.5
Ovary	MCAS	10
Ovary	NIHOVCAR3	11
Ovary	OAW28	9.7
Ovary	OAW42	10.2
Ovary	OC314	9.9
Ovary	OC316	9.9
Ovary	ONCODG1	10.9
Ovary	OV56	9.9
Ovary	OV7	10.3
Ovary	OV90	9.4
Ovary	OVCAR4	10.4
Ovary	OVCAR8	9.3
Ovary	OVISE	10.1
Ovary	OVK18	10.9
Ovary	OVKATE	10.5
Ovary	OVMANA	9.5
Ovary	OVSAHO	10.5
Ovary	OVTOKO	10.1
Ovary	RMGI	10.4
Ovary	RMUGS	10.4
Ovary	SKOV3	10.5
Ovary	SNU119	11.3
Ovary	SNU840	10
Ovary	SNU8	10.2
Ovary	TOV112D	11.1
Ovary	TOV21G	10.2
Ovary	TYKNU	10.5
Pancreas	ASPC1	9.9
Pancreas	BXPC3	10
Pancreas	CAPAN1	9.7
Pancreas	CAPAN2	10
Pancreas	CFPAC1	10.2
Pancreas	DANG	9.4
Pancreas	HPAC	9.5
Pancreas	HPAFII	9.9
Pancreas	HS766T	10.2
Pancreas	HUPT3	9.6
Pancreas	HUPT4	9.4
Pancreas	KCIMOH1	10.1
Pancreas	KLM1	10.3
Pancreas	KP2	9.7
Pancreas	KP3	9.7
Pancreas	KP4	9.9
Pancreas	L33	10.1
Pancreas	MIAPACA2	9.9
Pancreas	PANC0203	9.3
Pancreas	PANC0213	9.4
Pancreas	PANC0327	9.5
Pancreas	PANC0403	10.2
Pancreas	PANC0504	9.3
Pancreas	PANC0813	10.3
Pancreas	PANC1005	10.1
Pancreas	PANC1	9.8
Pancreas	PATU8902	9.6
Pancreas	PATU8988S	9.3
Pancreas	PATU8988T	9.9
Pancreas	PK1	9.5
Pancreas	PK45H	9.9
Pancreas	PK59	9.3
Pancreas	PL45	9.8
Pancreas	PSN1	10
Pancreas	QGP1	10.9
Pancreas	SNU213	9.9
Pancreas	SNU324	10.7
Pancreas	SNU410	9.9
Pancreas	SU8686	9.7
Pancreas	SUIT2	9.1
Pancreas	SW1990	9.8
Pancreas	T3M4	9.7
Pancreas	TCCPAN2	10
Pancreas	YAPC	9.8
Pleura	ACCMESO1	9.8
Pleura	DM3	9.9
Pleura	ISTMES1	9.7
Pleura	ISTMES2	9.5
Pleura	JL1	9.6
Pleura	MPP89	10.3
Pleura	MSTO211H	9.3
Pleura	NCIH2052	9.5
Pleura	NCIH2452	9.3
Pleura	NCIH28	10.2
Prostate	22RV1	10.5
Prostate	DU145	10.7
Prostate	LNCAPCLONEFGC	9.9
Prostate	MDAPCA2B	10
Prostate	NCIH660	10
Prostate	PC3	10.2
Prostate	VCAP	9.8
Salivary gland	A253	9.3
Salivary gland	YD15	9.6
Skin	A101D	9.7
Skin	A2058	10.4
Skin	A375	10.5
Skin	C32	9.2
Skin	CHL1	10.4
Skin	CJM	9.5
Skin	COLO679	10.7
Skin	COLO741	9.9
Skin	COLO783	9.7
Skin	COLO792	9.7
Skin	COLO800	9.5
Skin	COLO818	9.2
Skin	COLO829	10.1
Skin	COLO849	10
Skin	G361	10.6
Skin	GRM	10.5
Skin	HMCB	10.5
Skin	HS294T	9.9
Skin	HS600T	9.2
Skin	HS688AT	9.5
Skin	HS695T	10.4
Skin	HS839T	9.3
Skin	HS852T	9.9
Skin	HS895T	9.1
Skin	HS934T	9.2
Skin	HS936T	10.3
Skin	HS939T	9.5
Skin	HS940T	9.3
Skin	HS944T	10.3
Skin	HT144	9.7
Skin	IGR1	9.5
Skin	IGR37	10.3
Skin	IGR39	9.7
Skin	IPC298	10
Skin	K029AX	10.1
Skin	LOXIMVI	10
Skin	MALME3M	9.7
Skin	MDAMB435S	9.4
Skin	MELHO	9.5
Skin	MELJUSO	9.6
Skin	MEWO	9.6
Skin	RPMI7951	9.4
Skin	RVH421	9.3
Skin	SH4	9.8
Skin	SKMEL1	9.2
Skin	SKMEL24	9.5
Skin	SKMEL28	9.3
Skin	SKMEL2	9.9
Skin	SKMEL30	10
Skin	SKMEL31	9.2
Skin	SKMEL3	9.8
Skin	SKMEL5	10.6
Skin	UACC257	9.9
Skin	UACC62	9.9
Skin	WM115	9.6
Skin	WM1799	9.7
Skin	WM2664	9.2
Skin	WM793	9.7
Skin	WM88	10.4
Skin	WM983B	9.1
Small intestine	HUTU80	10
Soft tissue	A204	10.1
Soft tissue	G401	10.1
Soft tissue	G402	9.9
Soft tissue	GCT	9
Soft tissue	HS729	10.2
Soft tissue	HT1080	9.7
Soft tissue	KYM1	9.5
Soft tissue	MESSA	10.2
Soft tissue	RD	10.2
Soft tissue	RH30	10.1
Soft tissue	RH41	10
Soft tissue	RKN	9.7
Soft tissue	S117	9.9
Soft tissue	SJRH30	9.9
Soft tissue	SKLMS1	9
Soft tissue	SKUT1	10
Soft tissue	TE125T	9.2
Soft tissue	TE159T	9.2
Soft tissue	TE441T	9.8
Soft tissue	TE617T	9.7
Stomach	2313287	10.1
Stomach	AGS	9.9
Stomach	AZ521	10.2
Stomach	ECC10	9.6
Stomach	ECC12	10.1
Stomach	FU97	10.2
Stomach	GCIY	10.4
Stomach	GSS	9.8
Stomach	GSU	9.4
Stomach	HGC27	10.5
Stomach	HS746T	9.2
Stomach	HUG1N	10
Stomach	IM95	9.6
Stomach	KATOIII	9.5
Stomach	KE39	9.8
Stomach	LMSU	9.7
Stomach	MKN1	9.8
Stomach	MKN45	10
Stomach	MKN74	9.9
Stomach	MKN7	10.7
Stomach	NCCSTCK140	10.8
Stomach	NCIN87	10.3
Stomach	NUGC2	11
Stomach	NUGC3	10.4
Stomach	NUGC4	9.6
Stomach	OCUM1	10.6
Stomach	RERFGC1B	10.4
Stomach	SH10TC	9.6
Stomach	SNU16	10
Stomach	SNU1	9.6
Stomach	SNU216	10
Stomach	SNU520	9.3
Stomach	SNU5	10.2
Stomach	SNU601	9.6
Stomach	SNU620	9.5
Stomach	SNU668	9.9
Stomach	SNU719	9.7
Stomach	TGBC11TKB	9.9
Thyroid	8305C	9.8
Thyroid	8505C	9.2
Thyroid	BCPAP	9.6
Thyroid	BHT101	10.8
Thyroid	CAL62	9.6
Thyroid	CGTHW1	9.7
Thyroid	FTC133	9.9
Thyroid	FTC238	9.6
Thyroid	ML1	9.5
Thyroid	SW579	9.6
Thyroid	TT2609C02	10.2
Thyroid	TT	10.3
Upper aerodigestive tract	BHY	9.2
Upper aerodigestive tract	BICR16	10.2
Upper aerodigestive tract	BICR18	9.8
Upper aerodigestive tract	BICR22	10
Upper aerodigestive tract	BICR31	9.5
Upper aerodigestive tract	BICR56	9.6
Upper aerodigestive tract	BICR6	10
Upper aerodigestive tract	CAL27	9.8
Upper aerodigestive tract	CAL33	9.7
Upper aerodigestive tract	DETROIT562	9.5
Upper aerodigestive tract	FADU	9.8
Upper aerodigestive tract	HS840T	9.7
Upper aerodigestive tract	HSC2	9.4
Upper aerodigestive tract	HSC3	9.9
Upper aerodigestive tract	HSC4	10.1
Upper aerodigestive tract	PECAPJ15	9.7
Upper aerodigestive tract	PECAPJ34CLONEC12	9.8
Upper aerodigestive tract	PECAPJ41CLONED2	9.2
Upper aerodigestive tract	PECAPJ49	9.6
Upper aerodigestive tract	SCC15	9.5
Upper aerodigestive tract	SCC25	9.7
Upper aerodigestive tract	SCC4	9
Upper aerodigestive tract	SCC9	9.6
Upper aerodigestive tract	SNU1076	9.6
Upper aerodigestive tract	SNU1214	9.8
Upper aerodigestive tract	SNU46	10.4
Upper aerodigestive tract	SNU899	9.6
Upper aerodigestive tract	YD10B	9.8
Upper aerodigestive tract	YD38	10
Upper aerodigestive tract	YD8	9.6
Urinary tract	5637	10.5
Urinary tract	639V	9.6
Urinary tract	647V	10.3
Urinary tract	BC3C	9.7
Urinary tract	BFTC905	10.2
Urinary tract	CAL29	10
Urinary tract	HS172T	9.3
Urinary tract	HT1197	9.8
Urinary tract	HT1376	11.3
Urinary tract	J82	10.2
Urinary tract	JMSU1	11.4
Urinary tract	KMBC2	10.2
Urinary tract	KU1919	9.2
Urinary tract	RT11284	9.9
Urinary tract	RT112	9.9
Urinary tract	RT4	9.4
Urinary tract	SCABER	9.8
Urinary tract	SW1710	10
Urinary tract	SW780	9.7
Urinary tract	T24	9.7
Urinary tract	TCCSUP	10.6
Urinary tract	UMUC1	10.3
Urinary tract	UMUC3	9.6
Urinary tract	VMCUB1	9.9

> The Human Protein Atlas (HPA)

[ TOP ]

Tissue	Expression Level (TPM)
Adipose tissue	20
Adrenal gland	17.6
Appendix	16.8
Bone marrow	6.6
Breast	15.5
Cerebral cortex	30.9
Cervix, uterine	21.2
Colon	12.7
Duodenum	13.5
Endometrium	27.1
Epididymis	16.7
Esophagus	14.1
Fallopian tube	26
Gallbladder	15.5
Heart muscle	10.8
Kidney	12.7
Liver	5.1
Lung	18.4
Lymph node	17.9
Ovary	20.5
Pancreas	2.8
Parathyroid gland	18.9
Placenta	23.3
Prostate	25.6
Rectum	11.8
Salivary gland	8.9
Seminal vesicle	20.3
Skeletal muscle	1.5
Skin	19.1
Small intestine	14.1
Smooth muscle	22.3
Spleen	20.6
Stomach	13.8
Testis	22.3
Thyroid gland	17.8
Tonsil	16.1
Urinary bladder	15.3

> Text Mining based Expression [ TOP ]
There is no record.

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Somatic copy number alteration in primary tomur tissue

> The Cancer Genome Atlas (TCGA)

[ TOP ]

Correlation between expression and SCNA as well as percentage of patients in different status.

Cancer	Full Name	# Sample	R	P	% Loss	% Neutral	% Gain	Status
BLCA	Bladder urothelial carcinoma	404	0.742	9.29e-72	4.5	46.3	49.3	Gain
BRCA	Breast invasive carcinoma	1075	0.715	4.24e-169	1.9	26	72.1	Gain
CESC	Cervical and endocervical cancers	292	0.672	9.16e-40	2.4	44.5	53.1	Gain
COAD	Colon adenocarcinoma	449	0.541	1.46e-35	9.8	70.4	19.8	Neutral
ESCA	Esophageal carcinoma	183	0.566	7.16e-17	4.4	46.4	49.2	Gain
GBM	Glioblastoma multiforme	147	0.311	0.000127	2	79.6	18.4	Neutral
HNSC	Head and Neck squamous cell carcinoma	514	0.57	1.11e-45	7	67.7	25.3	Neutral
KIRC	Kidney renal clear cell carcinoma	525	0.343	5.96e-16	6.3	82.1	11.6	Neutral
KIRP	Kidney renal papillary cell carcinoma	288	0.495	3.41e-19	6.6	87.5	5.9	Neutral
LAML	Acute Myeloid Leukemia	166	0.103	0.186	0	98.8	1.2	Neutral
LGG	Brain Lower Grade Glioma	513	0.197	6.6e-06	1.9	91.2	6.8	Neutral
LIHC	Liver hepatocellular carcinoma	364	0.724	1.95e-60	1.1	26.9	72	Gain
LUAD	Lung adenocarcinoma	512	0.705	5.22e-78	2.1	25.2	72.7	Gain
LUSC	Lung squamous cell carcinoma	498	0.657	9.28e-63	4	44.2	51.8	Gain
OV	Ovarian serous cystadenocarcinoma	300	0.715	2.72e-48	2	33.7	64.3	Gain
PAAD	Pancreatic adenocarcinoma	177	0.681	1.97e-25	3.4	65	31.6	Neutral
PCPG	Pheochromocytoma and Paraganglioma	162	0.702	2.34e-25	8	74.7	17.3	Neutral
PRAD	Prostate adenocarcinoma	491	0.399	3.86e-20	0.6	91.2	8.1	Neutral
READ	Rectum adenocarcinoma	164	0.6	1.96e-17	7.9	63.4	28.7	Neutral
SARC	Sarcoma	255	0.584	1.02e-24	5.9	54.1	40	Gain
SKCM	Skin Cutaneous Melanoma	367	0.721	3.89e-60	3.8	41.7	54.5	Gain
STAD	Stomach adenocarcinoma	413	0.577	5.12e-38	1.9	62	36.1	Gain
TGCT	Testicular Germ Cell Tumors	150	0.561	8.54e-14	1.3	54	44.7	Gain
THCA	Thyroid carcinoma	497	0.412	8.49e-22	0.6	94	5.4	Neutral
THYM	Thymoma	119	0.338	0.000171	0	80.7	19.3	Neutral
UCEC	Uterine Corpus Endometrial Carcinoma	537	0.701	9.95e-81	0.2	54.6	45.3	Gain

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Methylation level in the promoter region of CR

> Methylation level in the promoter region of CR

[ TOP ]

Correlation between expression and methylation as well as differential methylation analysis.

Cancer	Full Name	R	P	# N	# T	Delta beta (T vs N)	P value (T vs N)	Status
BLCA	Bladder urothelial carcinoma	-0.477	0	17	408	-0.002	0.147	NS/NA
BRCA	Breast invasive carcinoma	-0.423	0	83	785	-0.018	0.000152	NS/NA
CESC	Cervical and endocervical cancers	-0.327	5.07e-09	3	306	NA	NA	NS/NA
COAD	Colon adenocarcinoma	-0.212	0.000152	19	297	-0.001	0.37	NS/NA
ESCA	Esophageal carcinoma	-0.311	1.1e-05	9	185	NA	NA	NS/NA
GBM	Glioblastoma multiforme	-0.197	0.115	1	64	NA	NA	NS/NA
HNSC	Head and Neck squamous cell carcinoma	-0.255	1.91e-09	20	522	-0.001	0.154	NS/NA
KIRC	Kidney renal clear cell carcinoma	-0.291	4.44e-08	24	319	0.004	0.000196	NS/NA
KIRP	Kidney renal papillary cell carcinoma	-0.129	0.0263	23	275	0.001	0.267	NS/NA
LAML	Acute Myeloid Leukemia	-0.115	0.134	0	170	NA	NA	NS/NA
LGG	Brain Lower Grade Glioma	-0.142	0.00102	0	530	NA	NA	NS/NA
LIHC	Liver hepatocellular carcinoma	-0.411	0	41	373	-0.003	0.0732	NS/NA
LUAD	Lung adenocarcinoma	-0.328	2.7e-13	21	456	-0.017	0.00764	NS/NA
LUSC	Lung squamous cell carcinoma	-0.463	0	8	370	NA	NA	NS/NA
OV	Ovarian serous cystadenocarcinoma	-0.817	0.0108	0	9	NA	NA	NS/NA
PAAD	Pancreatic adenocarcinoma	-0.29	7.42e-05	4	179	NA	NA	NS/NA
PCPG	Pheochromocytoma and Paraganglioma	-0.347	1.29e-06	3	184	NA	NA	NS/NA
PRAD	Prostate adenocarcinoma	-0.189	1.12e-05	35	498	-0.012	7.79e-05	NS/NA
READ	Rectum adenocarcinoma	-0.43	8.83e-06	2	99	NA	NA	NS/NA
SARC	Sarcoma	-0.446	0	0	263	NA	NA	NS/NA
SKCM	Skin Cutaneous Melanoma	-0.457	0	1	471	NA	NA	NS/NA
STAD	Stomach adenocarcinoma	-0.24	2.99e-06	0	372	NA	NA	NS/NA
TGCT	Testicular Germ Cell Tumors	-0.416	8.84e-08	0	156	NA	NA	NS/NA
THCA	Thyroid carcinoma	-0.175	3.36e-05	50	509	-0.002	0.0286	NS/NA
THYM	Thymoma	-0.201	0.0268	2	120	NA	NA	NS/NA
UCEC	Uterine Corpus Endometrial Carcinoma	-0.433	0	34	431	-0.009	0.00807	NS/NA

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Primary tumor tissue from TCGA > Normal tumor tissue from HPA

>The Cancer Genome Atlas (TCGA) [ TOP ]
There is no record.

> The Human Protein Atlas (HPA) [ TOP ]
There is no antibody staining data.

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Association between expresson and subtype > Overall survival analysis based on expression > Association between expresson and stage > Association between expresson and grade

> Subtype

[ TOP ]

Association between expresson and subtype.

Cancer	Full Name	# Patients	P Value (Kruskal-Wallis)	Association	Source
BLCA	Bladder urothelial carcinoma	128	0.746	NS	24476821
BRCA	Breast invasive carcinoma	521	1.19e-20	Significant	23000897
COAD	Colon adenocarcinoma	149	0.00192	Significant	22810696
GBM	Glioblastoma multiforme	157	0.000253	Significant	26824661
HNSC	Head and Neck squamous cell carcinoma	279	0.000127	Significant	25631445
KIRP	Kidney renal papillary cell carcinoma	161	0.263	NS	26536169
LGG	Brain Lower Grade Glioma	513	9.46e-27	Significant	26824661
LUAD	Lung adenocarcinoma	230	2.88e-07	Significant	25079552
LUSC	Lung squamous cell carcinoma	178	0.00121	Significant	22960745
OV	Ovarian serous cystadenocarcinoma	287	2.91e-07	Significant	21720365
PRAD	Prostate adenocarcinoma	333	0.157	NS	26544944
READ	Rectum adenocarcinoma	67	0.57	NS	22810696
SKCM	Skin Cutaneous Melanoma	315	0.00101	Significant	26091043
STAD	Stomach adenocarcinoma	277	2.2e-09	Significant	25079317
THCA	Thyroid carcinoma	391	2.82e-12	Significant	25417114
UCEC	Uterine Corpus Endometrial Carcinoma	232	0.000851	Significant	23636398

> Overall survival

[ TOP ]

Overall survival analysis based on expression.

Cancer	Full Name	# Patients	Hazard Ratio	P Value (Log Rank Test)	Association
BLCA	Bladder urothelial carcinoma	405	0.969	0.88	NS
BRCA	Breast invasive carcinoma	1079	0.897	0.622	NS
CESC	Cervical and endocervical cancers	291	1.586	0.199	NS
COAD	Colon adenocarcinoma	439	1.208	0.535	NS
ESCA	Esophageal carcinoma	184	1.002	0.995	NS
GBM	Glioblastoma multiforme	158	0.634	0.071	NS
HNSC	Head and Neck squamous cell carcinoma	518	1.235	0.267	NS
KIRC	Kidney renal clear cell carcinoma	531	1.044	0.843	NS
KIRP	Kidney renal papillary cell carcinoma	287	2.756	0.0279	Shorter
LAML	Acute Myeloid Leukemia	149	0.728	0.277	NS
LGG	Brain Lower Grade Glioma	511	0.374	2.52e-05	Longer
LIHC	Liver hepatocellular carcinoma	365	2.231	0.00104	Shorter
LUAD	Lung adenocarcinoma	502	1.039	0.861	NS
LUSC	Lung squamous cell carcinoma	494	0.764	0.177	NS
OV	Ovarian serous cystadenocarcinoma	303	0.826	0.366	NS
PAAD	Pancreatic adenocarcinoma	177	0.988	0.968	NS
PCPG	Pheochromocytoma and Paraganglioma	179	621438729.922	0.149	NS
PRAD	Prostate adenocarcinoma	497	1.165	0.87	NS
READ	Rectum adenocarcinoma	159	1.809	0.307	NS
SARC	Sarcoma	259	1.562	0.099	NS
SKCM	Skin Cutaneous Melanoma	459	1.407	0.0554	NS
STAD	Stomach adenocarcinoma	388	0.841	0.417	NS
TGCT	Testicular Germ Cell Tumors	134	0	0.164	NS
THCA	Thyroid carcinoma	500	0.26	0.076	NS
THYM	Thymoma	119	1.119	0.903	NS
UCEC	Uterine Corpus Endometrial Carcinoma	543	1.449	0.23	NS

> Stage

[ TOP ]

Association between expresson and stage.

Cancer	Full Name	# Patients	R Value (Spearman)	P Value (Spearman)	Association
BLCA	Bladder urothelial carcinoma	406	0.005	0.923	NS
BRCA	Breast invasive carcinoma	1071	0.044	0.151	NS
CESC	Cervical and endocervical cancers	167	-0.088	0.257	NS
COAD	Colon adenocarcinoma	445	0.119	0.012	Higher
ESCA	Esophageal carcinoma	162	-0.007	0.929	NS
HNSC	Head and Neck squamous cell carcinoma	448	0.056	0.239	NS
KIRC	Kidney renal clear cell carcinoma	531	0.05	0.255	NS
KIRP	Kidney renal papillary cell carcinoma	260	0.134	0.0313	Higher
LIHC	Liver hepatocellular carcinoma	347	0.128	0.0169	Higher
LUAD	Lung adenocarcinoma	507	0.047	0.289	NS
LUSC	Lung squamous cell carcinoma	497	0.079	0.0782	NS
OV	Ovarian serous cystadenocarcinoma	302	-0.01	0.868	NS
PAAD	Pancreatic adenocarcinoma	176	0.044	0.558	NS
READ	Rectum adenocarcinoma	156	0.063	0.433	NS
SKCM	Skin Cutaneous Melanoma	410	-0.037	0.458	NS
STAD	Stomach adenocarcinoma	392	-0.124	0.0142	Lower
TGCT	Testicular Germ Cell Tumors	81	0.072	0.525	NS
THCA	Thyroid carcinoma	499	0.096	0.0323	Higher
UCEC	Uterine Corpus Endometrial Carcinoma	501	0.058	0.197	NS

> Grade

[ TOP ]

Association between expresson and grade.

Cancer	Full Name	# Patients	R Value (Spearman)	P Value (Spearman)	Association
CESC	Cervical and endocervical cancers	272	0.161	0.00795	Higher
HNSC	Head and Neck squamous cell carcinoma	498	0.046	0.307	NS
KIRC	Kidney renal clear cell carcinoma	525	0.043	0.329	NS
LGG	Brain Lower Grade Glioma	514	-0.034	0.443	NS
LIHC	Liver hepatocellular carcinoma	366	0.238	4.28e-06	Higher
OV	Ovarian serous cystadenocarcinoma	296	-0.136	0.0191	Lower
PAAD	Pancreatic adenocarcinoma	176	0.073	0.334	NS
STAD	Stomach adenocarcinoma	406	-0.11	0.0273	Lower
UCEC	Uterine Corpus Endometrial Carcinoma	534	0.239	2.21e-08	Higher

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Targets inferred by reverse engineering method > Targets identified by ChIP-seq data

> Targets inferred by reverse engineering method [ TOP ]

> Targets identified by ChIP-seq data [ TOP ]

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Drugs from DrugBank database

> Drugs from DrugBank database [ TOP ]
There is no record for VPS72.

Summary
Symbol	VPS72
Name	vacuolar protein sorting 72 homolog
Aliases	YL-1; YL1; Swc2; TCFL1; transcription factor-like 1; vacuolar protein sorting 72 (yeast); transformation sup ......
Location	1q21.3
External Links	HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases	ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content	> Protein-Protein Interaction Network > miRNA Regulatory Relationship > Interactions from Text Mining

> Protein-Protein Interaction Network [ TOP ]

> miRNA Regulatory Relationship [ TOP ]

> Interactions from Text Mining [ TOP ]
There is no record for VPS72.