Browse PHF13 in pancancer

Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Domain, Function and Classification
> Gene Ontology
> KEGG and Reactome Pathway
> Domain, Function and Classification
 
Domain PF00628 PHD-finger
Function

Modulates chromatin structure. Required for normal chromosome condensation during the early stages of mitosis. Required for normal chromosome separation during mitosis.

Classification
Class Modification Substrate Product PubMed
Histone modification read # H3K4me3 # 19638409
> Gene Ontology
 
Biological Process GO:0000070 mitotic sister chromatid segregation
GO:0000819 sister chromatid segregation
GO:0006323 DNA packaging
GO:0007059 chromosome segregation
GO:0007067 mitotic nuclear division
GO:0007076 mitotic chromosome condensation
GO:0030261 chromosome condensation
GO:0071103 DNA conformation change
GO:0098813 nuclear chromosome segregation
Molecular Function GO:0003682 chromatin binding
GO:0035064 methylated histone binding
GO:0042393 histone binding
Cellular Component -
> KEGG and Reactome Pathway
 
KEGG -
Reactome -
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Mutation landscape in primary tumor tissue from TCGA
> Mutation landscape in cancer cell line from CCLE
> All mutations from COSMIC database V81
> Variations from text mining
> The Cancer Genome Atlas (TCGA)
 
> Cancer Cell Line Encyclopedia (CCLE)
 
There is no record.
> Catalogue of Somatic Mutations in Cancer (COSMIC)
 
COSMIC ID CDS change AA change Mutation Type Anatomical Site
COSM3866026c.527C>Tp.P176LSubstitution - MissenseSkin
COSM911674c.375G>Tp.R125SSubstitution - MissenseEndometrium
COSM350094c.593G>Tp.R198LSubstitution - MissenseLung
COSM1343976c.348_350delGAAp.K121delKDeletion - In frameLarge_intestine
COSM4496700c.480C>Tp.I160ISubstitution - coding silentSkin
COSM1343979c.777C>Ap.S259SSubstitution - coding silentLarge_intestine
COSM5754491c.593G>Ap.R198QSubstitution - MissenseLarge_intestine
COSM5638586c.712A>Gp.M238VSubstitution - MissenseOesophagus
COSM5705533c.347_348insGAAp.K121_R122insKInsertion - In frameHaematopoietic_and_lymphoid_tissue
COSM4608290c.226G>Tp.D76YSubstitution - MissenseAdrenal_gland
COSM4885535c.704G>Tp.C235FSubstitution - MissenseUpper_aerodigestive_tract
COSM5638587c.753G>Tp.E251DSubstitution - MissenseOesophagus
COSM1748567c.600C>Tp.I200ISubstitution - coding silentUrinary_tract
COSM5968398c.408G>Tp.R136SSubstitution - MissenseGenital_tract
COSM1343980c.830G>Ap.C277YSubstitution - MissenseLarge_intestine
COSM4623383c.278T>Gp.L93RSubstitution - MissenseLarge_intestine
COSM911675c.461G>Ap.S154NSubstitution - MissenseEndometrium
COSM426609c.760A>Cp.T254PSubstitution - MissenseBreast
COSM5683975c.398A>Gp.E133GSubstitution - MissenseSoft_tissue
COSM911678c.637G>Ap.D213NSubstitution - MissenseEndometrium
COSM1748567c.600C>Tp.I200ISubstitution - coding silentSkin
COSM3360984c.110C>Tp.A37VSubstitution - MissenseKidney
COSM4009501c.141+2T>Cp.?UnknownStomach
COSM4508358c.772C>Tp.L258LSubstitution - coding silentSkin
COSM3866027c.833G>Ap.R278QSubstitution - MissenseSkin
COSM5914735c.224C>Tp.S75LSubstitution - MissenseSkin
COSM911673c.338C>Tp.T113MSubstitution - MissenseEndometrium
COSM5955492c.459G>Ap.T153TSubstitution - coding silentUpper_aerodigestive_tract
COSM5604482c.790C>Tp.R264WSubstitution - MissenseSkin
COSM4998744c.293T>Gp.L98WSubstitution - MissensePancreas
COSM4835121c.769C>Tp.H257YSubstitution - MissenseCervix
COSM1663470c.728G>Tp.G243VSubstitution - MissenseKidney
COSM682381c.492C>Tp.P164PSubstitution - coding silentLung
COSM4009502c.212A>Gp.D71GSubstitution - MissenseStomach
COSM5451403c.601G>Ap.V201ISubstitution - MissenseLarge_intestine
COSM911677c.628C>Tp.R210*Substitution - NonsenseEndometrium
COSM350093c.139G>Tp.E47*Substitution - NonsenseLung
COSM1343975c.65G>Ap.R22HSubstitution - MissenseLarge_intestine
COSM4464727c.134C>Ap.P45QSubstitution - MissenseSkin
COSM4845961c.490C>Tp.P164SSubstitution - MissenseCervix
COSM911677c.628C>Tp.R210*Substitution - NonsenseSkin
COSM1343977c.697G>Ap.V233MSubstitution - MissenseLarge_intestine
COSM3419406c.629G>Ap.R210QSubstitution - MissenseLarge_intestine
COSM3966682c.840C>Gp.S280SSubstitution - coding silentCentral_nervous_system
COSM911671c.144A>Tp.E48DSubstitution - MissenseEndometrium
COSM1343978c.731G>Ap.R244HSubstitution - MissenseLarge_intestine
COSM2239714c.213C>Tp.D71DSubstitution - coding silentOesophagus
COSM5470548c.592C>Tp.R198WSubstitution - MissenseLarge_intestine
COSM1474152c.59A>Cp.K20TSubstitution - MissenseBreast
COSM4528746c.155G>Tp.R52MSubstitution - MissenseSkin
COSM1627155c.832C>Ap.R278RSubstitution - coding silentLiver
COSM1748567c.600C>Tp.I200ISubstitution - coding silentUrinary_tract
COSM5451404c.875C>Tp.T292MSubstitution - MissenseLarge_intestine
COSM4614789c.406_407insGp.L140fs*7Insertion - FrameshiftLarge_intestine
COSM682380c.629G>Tp.R210LSubstitution - MissenseLung
COSM911676c.571G>Tp.E191*Substitution - NonsenseEndometrium
COSM911672c.306G>Tp.K102NSubstitution - MissenseEndometrium
COSM3419406c.629G>Ap.R210QSubstitution - MissenseStomach
> Text Mining based Variations
 
There is no record for PHF13.
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Post-translational modification (PTM)
> Post-translational modification (PTM)
 
There is no PTM data
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Expression analysis in primary tumor tissue from TCGA
> Expression level in cancer cell line from CCLE
> Expression level in human normal tissue from HPA
> Text mining based expression change
> The Cancer Genome Atlas (TCGA)
 


  Differential expression analysis for cancers with more than 10 normal samples
Cancer Full Name # N # T Median (N) Median (T) LogFC Adj. P Status
BLCABladder urothelial carcinoma194085.3715.3940.0240.873NS
BRCABreast invasive carcinoma11211005.3445.363-0.0370.417NS
CESCCervical and endocervical cancers33065.8415.479NANANA
COADColon adenocarcinoma414594.1534.4910.2870.000318NS
ESCAEsophageal carcinoma111854.0484.5630.1470.531NS
GBMGlioblastoma multiforme51665.1814.97NANANA
HNSCHead and Neck squamous cell carcinoma445224.9385.1010.1760.0308NS
KIRCKidney renal clear cell carcinoma725344.4324.5050.0330.618NS
KIRPKidney renal papillary cell carcinoma322914.4674.482-0.0060.956NS
LAMLAcute Myeloid Leukemia0173NA3.434NANANA
LGGBrain Lower Grade Glioma0530NA4.748NANANA
LIHCLiver hepatocellular carcinoma503734.1183.924-0.290.00207NS
LUADLung adenocarcinoma595174.3324.780.333.16e-06NS
LUSCLung squamous cell carcinoma515014.4015.1590.7366.94e-22Over
OVOvarian serous cystadenocarcinoma0307NA4.827NANANA
PAADPancreatic adenocarcinoma41794.8574.918NANANA
PCPGPheochromocytoma and Paraganglioma31844.6124.496NANANA
PRADProstate adenocarcinoma524984.9244.907-0.0340.564NS
READRectum adenocarcinoma101674.3264.5550.2260.227NS
SARCSarcoma22634.8485.436NANANA
SKCMSkin Cutaneous Melanoma14724.9095.119NANANA
STADStomach adenocarcinoma354154.2024.314-0.1970.0556NS
TGCTTesticular Germ Cell Tumors0156NA5.785NANANA
THCAThyroid carcinoma595094.3514.9750.5553.17e-16NS
THYMThymoma21204.9435.014NANANA
UCECUterine Corpus Endometrial Carcinoma355465.5815.066-0.3744.39e-05NS
> Cancer Cell Line Encyclopedia (CCLE)
 



Tissue Cell Line Expression Level (Microarray)
Autonomic ganglia CHP126 9.1
Autonomic ganglia CHP212 9.2
Autonomic ganglia IMR32 8.9
Autonomic ganglia KELLY 9.4
Autonomic ganglia KPNRTBM1 8.8
Autonomic ganglia KPNSI9S 8.3
Autonomic ganglia KPNYN 9.1
Autonomic ganglia MHHNB11 10.1
Autonomic ganglia NB1 9.5
Autonomic ganglia NH6 9.1
Autonomic ganglia SHSY5Y 10.1
Autonomic ganglia SIMA 9.2
Autonomic ganglia SKNAS 9.4
Autonomic ganglia SKNBE2 8.8
Autonomic ganglia SKNDZ 9.8
Autonomic ganglia SKNFI 11
Autonomic ganglia SKNSH 9.4
Biliary tract HUCCT1 8.9
Biliary tract HUH28 10
Biliary tract SNU1079 9.5
Biliary tract SNU1196 9.2
Biliary tract SNU245 8.8
Biliary tract SNU308 9.9
Biliary tract SNU478 8.5
Bone 143B 9.5
Bone A673 10.8
Bone CADOES1 10.2
Bone CAL78 10.5
Bone G292CLONEA141B1 10
Bone HOS 10
Bone HS706T 9.7
Bone HS737T 9.6
Bone HS819T 9.2
Bone HS821T 9.5
Bone HS822T 9.6
Bone HS863T 9.8
Bone HS870T 9.3
Bone HS888T 9.3
Bone MG63 10
Bone MHHES1 11.1
Bone OUMS27 9.4
Bone RDES 11.5
Bone SJSA1 10
Bone SKES1 11.3
Bone SKNMC 11
Bone SW1353 9.4
Bone T173 9.8
Bone TC71 10.5
Bone U2OS 10.3
Breast AU565 9.6
Breast BT20 9.5
Breast BT474 9.4
Breast BT483 10
Breast BT549 11.1
Breast CAL120 10.4
Breast CAL148 10.9
Breast CAL51 9.9
Breast CAL851 9.8
Breast CAMA1 10
Breast DU4475 10.4
Breast EFM192A 9.5
Breast EFM19 9.2
Breast EVSAT 9.2
Breast HCC1143 9.5
Breast HCC1187 11
Breast HCC1395 9.6
Breast HCC1419 10.1
Breast HCC1428 9.6
Breast HCC1500 9.3
Breast HCC1569 9.8
Breast HCC1599 8.4
Breast HCC1806 10.8
Breast HCC1937 9.6
Breast HCC1954 9.1
Breast HCC202 10
Breast HCC2157 10.5
Breast HCC2218 8.6
Breast HCC38 9.6
Breast HCC70 10.3
Breast HDQP1 9.6
Breast HMC18 9.4
Breast HS274T 9.6
Breast HS281T 9.5
Breast HS343T 9.7
Breast HS578T 10.2
Breast HS606T 9.6
Breast HS739T 9.5
Breast HS742T 9.2
Breast JIMT1 10.4
Breast KPL1 10
Breast MCF7 9.4
Breast MDAMB134VI 9.4
Breast MDAMB157 9.8
Breast MDAMB175VII 9
Breast MDAMB231 9.8
Breast MDAMB361 9.8
Breast MDAMB415 8.8
Breast MDAMB436 9.3
Breast MDAMB453 10
Breast MDAMB468 9.4
Breast SKBR3 9.9
Breast T47D 9.6
Breast UACC812 9.8
Breast UACC893 9.1
Breast YMB1 9.9
Breast ZR751 9.5
Breast ZR7530 9.4
Central nervous system 1321N1 10
Central nervous system 42MGBA 9.4
Central nervous system 8MGBA 9.7
Central nervous system A172 9.2
Central nervous system AM38 9.4
Central nervous system BECKER 9.5
Central nervous system CAS1 9.6
Central nervous system CCFSTTG1 10
Central nervous system D283MED 9.7
Central nervous system D341MED 8.5
Central nervous system DAOY 10
Central nervous system DBTRG05MG 9.7
Central nervous system DKMG 10.1
Central nervous system GAMG 9.4
Central nervous system GB1 10.3
Central nervous system GI1 10.3
Central nervous system GMS10 10.2
Central nervous system GOS3 9.9
Central nervous system H4 9.2
Central nervous system HS683 9.7
Central nervous system KALS1 10.2
Central nervous system KG1C 9.1
Central nervous system KNS42 9.3
Central nervous system KNS60 9.6
Central nervous system KNS81 8.6
Central nervous system KS1 9.5
Central nervous system LN18 10.1
Central nervous system LN229 9.9
Central nervous system M059K 9.3
Central nervous system MOGGCCM 10.3
Central nervous system MOGGUVW 10
Central nervous system NMCG1 9.2
Central nervous system ONS76 9.9
Central nervous system SF126 9.3
Central nervous system SF295 9.2
Central nervous system SNB19 9.3
Central nervous system SNU1105 10.3
Central nervous system SNU201 10
Central nervous system SNU466 9.7
Central nervous system SNU489 10.3
Central nervous system SNU626 9.6
Central nervous system SNU738 9.2
Central nervous system SW1088 9.9
Central nervous system SW1783 9.9
Central nervous system T98G 9.9
Central nervous system TM31 9.8
Central nervous system U118MG 9.9
Central nervous system U138MG 10.3
Central nervous system U251MG 9.6
Central nervous system U87MG 9.6
Central nervous system YH13 9.9
Central nervous system YKG1 9.7
Endometrium AN3CA 10.4
Endometrium COLO684 10.6
Endometrium EFE184 8.7
Endometrium EN 10.1
Endometrium ESS1 9.4
Endometrium HEC108 9.5
Endometrium HEC151 9.1
Endometrium HEC1A 10
Endometrium HEC1B 10.4
Endometrium HEC251 9.3
Endometrium HEC265 9.4
Endometrium HEC50B 8.7
Endometrium HEC59 9.7
Endometrium HEC6 10.1
Endometrium ISHIKAWAHERAKLIO02ER 9.8
Endometrium JHUEM1 9.3
Endometrium JHUEM2 10.5
Endometrium JHUEM3 9.7
Endometrium KLE 9.4
Endometrium MFE280 8
Endometrium MFE296 10.7
Endometrium MFE319 9.4
Endometrium RL952 10.3
Endometrium SNGM 9.5
Endometrium SNU1077 10.1
Endometrium SNU685 9.7
Endometrium TEN 9
Haematopoietic and lymphoid 697 10
Haematopoietic and lymphoid A3KAW 9.3
Haematopoietic and lymphoid A4FUK 9.4
Haematopoietic and lymphoid ALLSIL 10.4
Haematopoietic and lymphoid AML193 9.9
Haematopoietic and lymphoid AMO1 9.3
Haematopoietic and lymphoid BCP1 9.9
Haematopoietic and lymphoid BDCM 9
Haematopoietic and lymphoid BL41 9
Haematopoietic and lymphoid BL70 9.3
Haematopoietic and lymphoid BV173 10.1
Haematopoietic and lymphoid CA46 8.3
Haematopoietic and lymphoid CI1 8.4
Haematopoietic and lymphoid CMK115 8.9
Haematopoietic and lymphoid CMK86 9.7
Haematopoietic and lymphoid CMK 10.1
Haematopoietic and lymphoid CMLT1 9.3
Haematopoietic and lymphoid COLO775 9
Haematopoietic and lymphoid DAUDI 9.8
Haematopoietic and lymphoid DB 9.4
Haematopoietic and lymphoid DEL 9.3
Haematopoietic and lymphoid DND41 10.9
Haematopoietic and lymphoid DOHH2 9.6
Haematopoietic and lymphoid EB1 9.1
Haematopoietic and lymphoid EB2 8.8
Haematopoietic and lymphoid EHEB 9.2
Haematopoietic and lymphoid EJM 9.2
Haematopoietic and lymphoid EM2 10.3
Haematopoietic and lymphoid EOL1 9.6
Haematopoietic and lymphoid F36P 9.6
Haematopoietic and lymphoid GA10 9.3
Haematopoietic and lymphoid GDM1 9.8
Haematopoietic and lymphoid GRANTA519 8.6
Haematopoietic and lymphoid HDLM2 10.3
Haematopoietic and lymphoid HDMYZ 9.7
Haematopoietic and lymphoid HEL9217 10.2
Haematopoietic and lymphoid HEL 10
Haematopoietic and lymphoid HH 10.8
Haematopoietic and lymphoid HL60 9
Haematopoietic and lymphoid HPBALL 11
Haematopoietic and lymphoid HS604T 9.5
Haematopoietic and lymphoid HS611T 8.8
Haematopoietic and lymphoid HS616T 9
Haematopoietic and lymphoid HS751T 9.3
Haematopoietic and lymphoid HT 8.6
Haematopoietic and lymphoid HTK 9.8
Haematopoietic and lymphoid HUNS1 8.8
Haematopoietic and lymphoid HUT102 9.6
Haematopoietic and lymphoid HUT78 8.6
Haematopoietic and lymphoid JEKO1 10
Haematopoietic and lymphoid JK1 9.9
Haematopoietic and lymphoid JM1 10
Haematopoietic and lymphoid JURKAT 10
Haematopoietic and lymphoid JURLMK1 10.5
Haematopoietic and lymphoid JVM2 9.6
Haematopoietic and lymphoid JVM3 8.8
Haematopoietic and lymphoid K562 9.9
Haematopoietic and lymphoid KARPAS299 9.8
Haematopoietic and lymphoid KARPAS422 9.3
Haematopoietic and lymphoid KARPAS620 8.9
Haematopoietic and lymphoid KASUMI1 10
Haematopoietic and lymphoid KASUMI2 9.8
Haematopoietic and lymphoid KASUMI6 9
Haematopoietic and lymphoid KCL22 10.1
Haematopoietic and lymphoid KE37 9.7
Haematopoietic and lymphoid KE97 9.1
Haematopoietic and lymphoid KG1 9.7
Haematopoietic and lymphoid KHM1B 8.3
Haematopoietic and lymphoid KIJK 8.8
Haematopoietic and lymphoid KMH2 9.8
Haematopoietic and lymphoid KMM1 9.3
Haematopoietic and lymphoid KMS11 9.8
Haematopoietic and lymphoid KMS12BM 9.5
Haematopoietic and lymphoid KMS18 9.2
Haematopoietic and lymphoid KMS20 10.1
Haematopoietic and lymphoid KMS21BM 8.8
Haematopoietic and lymphoid KMS26 10.1
Haematopoietic and lymphoid KMS27 9
Haematopoietic and lymphoid KMS28BM 9.8
Haematopoietic and lymphoid KMS34 8.4
Haematopoietic and lymphoid KO52 9.6
Haematopoietic and lymphoid KOPN8 10.2
Haematopoietic and lymphoid KU812 9.2
Haematopoietic and lymphoid KYO1 10.6
Haematopoietic and lymphoid L1236 9.3
Haematopoietic and lymphoid L363 9.6
Haematopoietic and lymphoid L428 8.5
Haematopoietic and lymphoid L540 9.9
Haematopoietic and lymphoid LAMA84 10.2
Haematopoietic and lymphoid LOUCY 10
Haematopoietic and lymphoid LP1 8.8
Haematopoietic and lymphoid M07E 9.3
Haematopoietic and lymphoid MC116 8.6
Haematopoietic and lymphoid ME1 9.5
Haematopoietic and lymphoid MEC1 9.4
Haematopoietic and lymphoid MEC2 8.3
Haematopoietic and lymphoid MEG01 9.6
Haematopoietic and lymphoid MHHCALL2 9.7
Haematopoietic and lymphoid MHHCALL3 10.4
Haematopoietic and lymphoid MHHCALL4 10
Haematopoietic and lymphoid MINO 9.7
Haematopoietic and lymphoid MJ 9.6
Haematopoietic and lymphoid MM1S 9.6
Haematopoietic and lymphoid MOLM13 8.9
Haematopoietic and lymphoid MOLM16 10.2
Haematopoietic and lymphoid MOLM6 10.4
Haematopoietic and lymphoid MOLP2 8.7
Haematopoietic and lymphoid MOLP8 10.1
Haematopoietic and lymphoid MOLT13 9.2
Haematopoietic and lymphoid MOLT16 8.9
Haematopoietic and lymphoid MOLT4 9.2
Haematopoietic and lymphoid MONOMAC1 9.5
Haematopoietic and lymphoid MONOMAC6 9.6
Haematopoietic and lymphoid MOTN1 10.9
Haematopoietic and lymphoid MUTZ5 10.5
Haematopoietic and lymphoid MV411 9.8
Haematopoietic and lymphoid NALM19 10.3
Haematopoietic and lymphoid NALM1 10.1
Haematopoietic and lymphoid NALM6 10.1
Haematopoietic and lymphoid NAMALWA 10.5
Haematopoietic and lymphoid NB4 9.4
Haematopoietic and lymphoid NCIH929 7.7
Haematopoietic and lymphoid NCO2 10.3
Haematopoietic and lymphoid NOMO1 8.6
Haematopoietic and lymphoid NUDHL1 10.3
Haematopoietic and lymphoid NUDUL1 9.3
Haematopoietic and lymphoid OCIAML2 8.8
Haematopoietic and lymphoid OCIAML3 10.4
Haematopoietic and lymphoid OCIAML5 9.8
Haematopoietic and lymphoid OCILY10 9.8
Haematopoietic and lymphoid OCILY19 9.1
Haematopoietic and lymphoid OCILY3 8.9
Haematopoietic and lymphoid OCIM1 9.7
Haematopoietic and lymphoid OPM2 8.4
Haematopoietic and lymphoid P12ICHIKAWA 9.8
Haematopoietic and lymphoid P31FUJ 8.4
Haematopoietic and lymphoid P3HR1 9.3
Haematopoietic and lymphoid PCM6 9.1
Haematopoietic and lymphoid PEER 9.4
Haematopoietic and lymphoid PF382 10.1
Haematopoietic and lymphoid PFEIFFER 9.6
Haematopoietic and lymphoid PL21 9.5
Haematopoietic and lymphoid RAJI 9.4
Haematopoietic and lymphoid RCHACV 9.9
Haematopoietic and lymphoid REC1 8.7
Haematopoietic and lymphoid REH 9.7
Haematopoietic and lymphoid RI1 10.2
Haematopoietic and lymphoid RL 9.6
Haematopoietic and lymphoid RPMI8226 9.4
Haematopoietic and lymphoid RPMI8402 10.1
Haematopoietic and lymphoid RS411 9.2
Haematopoietic and lymphoid SEM 8.7
Haematopoietic and lymphoid SET2 9.8
Haematopoietic and lymphoid SIGM5 9
Haematopoietic and lymphoid SKM1 9.9
Haematopoietic and lymphoid SKMM2 9.5
Haematopoietic and lymphoid SR786 9.2
Haematopoietic and lymphoid ST486 9.3
Haematopoietic and lymphoid SUDHL10 10.2
Haematopoietic and lymphoid SUDHL1 9.1
Haematopoietic and lymphoid SUDHL4 8.5
Haematopoietic and lymphoid SUDHL5 9.7
Haematopoietic and lymphoid SUDHL6 10.1
Haematopoietic and lymphoid SUDHL8 9.7
Haematopoietic and lymphoid SUPB15 9.7
Haematopoietic and lymphoid SUPHD1 9.3
Haematopoietic and lymphoid SUPM2 9.3
Haematopoietic and lymphoid SUPT11 11.5
Haematopoietic and lymphoid SUPT1 9.7
Haematopoietic and lymphoid TALL1 10.2
Haematopoietic and lymphoid TF1 10
Haematopoietic and lymphoid THP1 8.4
Haematopoietic and lymphoid TO175T 9.6
Haematopoietic and lymphoid TOLEDO 9.4
Haematopoietic and lymphoid U266B1 10
Haematopoietic and lymphoid U937 9.3
Haematopoietic and lymphoid UT7 10
Haematopoietic and lymphoid WSUDLCL2 10.4
Kidney 769P 8.9
Kidney 786O 10.1
Kidney A498 9.1
Kidney A704 9.5
Kidney ACHN 8.8
Kidney BFTC909 9.4
Kidney CAKI1 9.3
Kidney CAKI2 9
Kidney CAL54 9.7
Kidney KMRC1 8.9
Kidney KMRC20 9.8
Kidney KMRC2 8.6
Kidney KMRC3 8.7
Kidney OSRC2 9.4
Kidney RCC10RGB 9.7
Kidney SNU1272 9.3
Kidney SNU349 9.2
Kidney TUHR10TKB 9.8
Kidney TUHR14TKB 8.7
Kidney TUHR4TKB 9.4
Kidney VMRCRCW 8.9
Kidney VMRCRCZ 9.3
Large intestine C2BBE1 9.8
Large intestine CCK81 8.7
Large intestine CL11 9.8
Large intestine CL14 10
Large intestine CL34 8.3
Large intestine CL40 8.9
Large intestine COLO205 8.3
Large intestine COLO320 9.8
Large intestine COLO678 10
Large intestine CW2 9.5
Large intestine DLD1 9.4
Large intestine GP2D 9.8
Large intestine HCC56 8.6
Large intestine HCT116 9.9
Large intestine HCT15 9.8
Large intestine HS675T 9.5
Large intestine HS698T 9.6
Large intestine HT115 9.1
Large intestine HT29 9.6
Large intestine HT55 9
Large intestine KM12 8.4
Large intestine LOVO 9.2
Large intestine LS1034 8.2
Large intestine LS123 9.1
Large intestine LS180 8.7
Large intestine LS411N 8.7
Large intestine LS513 8.4
Large intestine MDST8 9.9
Large intestine NCIH508 8.6
Large intestine NCIH716 9.2
Large intestine NCIH747 8.9
Large intestine OUMS23 10.1
Large intestine RCM1 8.8
Large intestine RKO 9.1
Large intestine SKCO1 8.2
Large intestine SNU1040 10.4
Large intestine SNU1197 9.3
Large intestine SNU175 9.7
Large intestine SNU283 9.4
Large intestine SNU407 9.8
Large intestine SNU503 9.2
Large intestine SNU61 9
Large intestine SNU81 8.4
Large intestine SNUC1 9
Large intestine SNUC2A 10.3
Large intestine SNUC4 8.7
Large intestine SNUC5 9.8
Large intestine SW1116 9.2
Large intestine SW1417 8.8
Large intestine SW1463 9.1
Large intestine SW403 8.6
Large intestine SW480 8.9
Large intestine SW48 10
Large intestine SW620 8.8
Large intestine SW837 9.6
Large intestine SW948 9.3
Large intestine T84 8.9
Liver ALEXANDERCELLS 9.6
Liver C3A 10.2
Liver HEP3B217 9.8
Liver HEPG2 9.7
Liver HLE 10.4
Liver HLF 10.2
Liver HUH1 9.4
Liver HUH6 10
Liver HUH7 9.2
Liver JHH1 10.1
Liver JHH2 9.3
Liver JHH4 9.9
Liver JHH5 9
Liver JHH6 9.8
Liver JHH7 10.2
Liver LI7 9.5
Liver PLCPRF5 9.9
Liver SKHEP1 9
Liver SNU182 9.9
Liver SNU387 10.4
Liver SNU398 10.3
Liver SNU423 9.8
Liver SNU449 9.7
Liver SNU475 10.2
Liver SNU761 9.5
Liver SNU878 9.4
Liver SNU886 10.1
Lung A549 8.2
Lung ABC1 9
Lung BEN 10
Lung CAL12T 9
Lung CALU1 9.7
Lung CALU3 8.9
Lung CALU6 9.5
Lung CHAGOK1 9.5
Lung COLO668 10.1
Lung COLO699 10.6
Lung CORL105 8.7
Lung CORL23 9.2
Lung CORL24 10.5
Lung CORL279 9.1
Lung CORL311 10.2
Lung CORL47 11.1
Lung CORL51 11.2
Lung CORL88 11.5
Lung CORL95 11.4
Lung CPCN 9.4
Lung DMS114 11.2
Lung DMS153 10.1
Lung DMS273 10.3
Lung DMS454 9.5
Lung DMS53 8.7
Lung DMS79 10
Lung DV90 9.4
Lung EBC1 8.8
Lung EPLC272H 8.4
Lung HARA 9.2
Lung HCC1171 9.1
Lung HCC1195 9.5
Lung HCC15 9
Lung HCC2279 8.6
Lung HCC2935 8
Lung HCC33 9.9
Lung HCC366 9.2
Lung HCC4006 8.7
Lung HCC44 9.6
Lung HCC78 9.2
Lung HCC827 8.5
Lung HCC95 9.4
Lung HLC1 10.3
Lung HLFA 9.1
Lung HS229T 9.4
Lung HS618T 9.4
Lung IALM 10
Lung KNS62 8.4
Lung LC1F 9
Lung LC1SQSF 9.2
Lung LCLC103H 9.4
Lung LCLC97TM1 9.3
Lung LK2 9.5
Lung LOUNH91 9.5
Lung LU65 9
Lung LU99 9.5
Lung LUDLU1 8.3
Lung LXF289 9.6
Lung MORCPR 9.5
Lung NCIH1048 10.8
Lung NCIH1092 11.1
Lung NCIH1105 10.5
Lung NCIH1155 10.1
Lung NCIH1184 9.7
Lung NCIH1299 9.9
Lung NCIH1339 10
Lung NCIH1341 10.4
Lung NCIH1355 9.1
Lung NCIH1373 9.1
Lung NCIH1385 8.7
Lung NCIH1395 7.5
Lung NCIH1435 9.6
Lung NCIH1436 10.1
Lung NCIH1437 8.7
Lung NCIH146 9.4
Lung NCIH1563 9.1
Lung NCIH1568 9.7
Lung NCIH1573 8.9
Lung NCIH1581 10.6
Lung NCIH1618 10.1
Lung NCIH1623 8.7
Lung NCIH1648 7.7
Lung NCIH1650 10
Lung NCIH1651 9.3
Lung NCIH1666 8.7
Lung NCIH1693 9.2
Lung NCIH1694 9.4
Lung NCIH1703 9.9
Lung NCIH1734 9.3
Lung NCIH1755 10.1
Lung NCIH1781 9.7
Lung NCIH1792 9.6
Lung NCIH1793 8.9
Lung NCIH1836 9.2
Lung NCIH1838 8.8
Lung NCIH1869 8.9
Lung NCIH1876 10.4
Lung NCIH1915 8.6
Lung NCIH1930 9.9
Lung NCIH1944 8.4
Lung NCIH1963 9.3
Lung NCIH196 10.7
Lung NCIH1975 8.5
Lung NCIH2009 9
Lung NCIH2023 8.9
Lung NCIH2029 9.8
Lung NCIH2030 9.3
Lung NCIH2066 9.4
Lung NCIH2081 10.1
Lung NCIH2085 9.2
Lung NCIH2087 9.2
Lung NCIH209 9.2
Lung NCIH2106 10.6
Lung NCIH2110 9
Lung NCIH211 10.3
Lung NCIH2122 8.4
Lung NCIH2126 8.6
Lung NCIH2141 10.2
Lung NCIH2170 8.5
Lung NCIH2171 9.6
Lung NCIH2172 9.5
Lung NCIH2196 10.4
Lung NCIH2227 10.6
Lung NCIH2228 9.5
Lung NCIH226 9.3
Lung NCIH2286 9.6
Lung NCIH2291 9.1
Lung NCIH2342 9.2
Lung NCIH2347 9.3
Lung NCIH23 9.9
Lung NCIH2405 9.8
Lung NCIH2444 9.3
Lung NCIH292 7.6
Lung NCIH322 8.8
Lung NCIH3255 8.7
Lung NCIH358 9.5
Lung NCIH441 9.8
Lung NCIH446 10.9
Lung NCIH460 8.6
Lung NCIH510 10.5
Lung NCIH520 9.4
Lung NCIH522 11.1
Lung NCIH524 8.7
Lung NCIH526 10.2
Lung NCIH596 9.8
Lung NCIH647 9.6
Lung NCIH650 10.4
Lung NCIH661 9.8
Lung NCIH69 9.3
Lung NCIH727 8.5
Lung NCIH810 9.2
Lung NCIH82 9.7
Lung NCIH838 9.5
Lung NCIH841 10.8
Lung NCIH854 9.3
Lung NCIH889 10.3
Lung PC14 9.2
Lung RERFLCAD1 9.7
Lung RERFLCAD2 9.6
Lung RERFLCAI 9.6
Lung RERFLCKJ 8.4
Lung RERFLCMS 9
Lung RERFLCSQ1 9.1
Lung SBC5 11.4
Lung SCLC21H 10.2
Lung SHP77 9.7
Lung SKLU1 9.2
Lung SKMES1 9.9
Lung SQ1 9.6
Lung SW1271 9.9
Lung SW1573 9.3
Lung SW900 8.6
Lung VMRCLCD 9.4
Lung VMRCLCP 8.6
Oesophagus COLO680N 9
Oesophagus ECGI10 8.4
Oesophagus KYSE140 9.5
Oesophagus KYSE150 8.8
Oesophagus KYSE180 9.1
Oesophagus KYSE270 10.7
Oesophagus KYSE30 9.1
Oesophagus KYSE410 8.7
Oesophagus KYSE450 8.8
Oesophagus KYSE510 9.5
Oesophagus KYSE520 10.1
Oesophagus KYSE70 9.2
Oesophagus OE19 9.3
Oesophagus OE33 8.9
Oesophagus TE10 9.6
Oesophagus TE11 9.3
Oesophagus TE14 9.4
Oesophagus TE15 8.9
Oesophagus TE1 9.9
Oesophagus TE4 8.9
Oesophagus TE5 9.1
Oesophagus TE6 9
Oesophagus TE8 10.8
Oesophagus TE9 8.9
Oesophagus TT 8.8
Ovary 59M 10.2
Ovary A2780 11
Ovary CAOV3 10.2
Ovary CAOV4 9.1
Ovary COLO704 9.8
Ovary COV318 9.8
Ovary COV362 9.2
Ovary COV434 10.7
Ovary COV504 9.5
Ovary COV644 8.9
Ovary EFO21 9
Ovary EFO27 9.8
Ovary ES2 9.3
Ovary FUOV1 9.6
Ovary HEYA8 8.3
Ovary HS571T 9.4
Ovary IGROV1 10
Ovary JHOC5 9.4
Ovary JHOM1 9.6
Ovary JHOM2B 9.9
Ovary JHOS2 9.2
Ovary JHOS4 9.9
Ovary KURAMOCHI 10.5
Ovary MCAS 9.6
Ovary NIHOVCAR3 11.1
Ovary OAW28 9.8
Ovary OAW42 9.7
Ovary OC314 9.4
Ovary OC316 9.3
Ovary ONCODG1 10.9
Ovary OV56 9.6
Ovary OV7 10.3
Ovary OV90 9.4
Ovary OVCAR4 9.6
Ovary OVCAR8 9.7
Ovary OVISE 9.7
Ovary OVK18 10.6
Ovary OVKATE 9.1
Ovary OVMANA 10
Ovary OVSAHO 10
Ovary OVTOKO 9
Ovary RMGI 9.6
Ovary RMUGS 9
Ovary SKOV3 9.8
Ovary SNU119 10.6
Ovary SNU840 9.1
Ovary SNU8 9.2
Ovary TOV112D 11
Ovary TOV21G 9.8
Ovary TYKNU 9.7
Pancreas ASPC1 9.2
Pancreas BXPC3 9.7
Pancreas CAPAN1 9.4
Pancreas CAPAN2 9.8
Pancreas CFPAC1 9.7
Pancreas DANG 9
Pancreas HPAC 9.7
Pancreas HPAFII 8.8
Pancreas HS766T 9.7
Pancreas HUPT3 9.3
Pancreas HUPT4 9.6
Pancreas KCIMOH1 9.3
Pancreas KLM1 10
Pancreas KP2 10.9
Pancreas KP3 9.3
Pancreas KP4 10.3
Pancreas L33 9
Pancreas MIAPACA2 10
Pancreas PANC0203 9.4
Pancreas PANC0213 9.9
Pancreas PANC0327 8.6
Pancreas PANC0403 8.8
Pancreas PANC0504 7
Pancreas PANC0813 9.1
Pancreas PANC1005 8.8
Pancreas PANC1 10.6
Pancreas PATU8902 8.6
Pancreas PATU8988S 9.2
Pancreas PATU8988T 9.6
Pancreas PK1 9.1
Pancreas PK45H 9.7
Pancreas PK59 9.3
Pancreas PL45 8.5
Pancreas PSN1 9.3
Pancreas QGP1 9.3
Pancreas SNU213 10.2
Pancreas SNU324 9.1
Pancreas SNU410 9.7
Pancreas SU8686 9.2
Pancreas SUIT2 9.8
Pancreas SW1990 8.3
Pancreas T3M4 9.4
Pancreas TCCPAN2 8.6
Pancreas YAPC 9.7
Pleura ACCMESO1 8.9
Pleura DM3 9.4
Pleura ISTMES1 8.7
Pleura ISTMES2 9.7
Pleura JL1 10.2
Pleura MPP89 9.3
Pleura MSTO211H 9.2
Pleura NCIH2052 9.4
Pleura NCIH2452 9.9
Pleura NCIH28 9.1
Prostate 22RV1 9.4
Prostate DU145 9.2
Prostate LNCAPCLONEFGC 9.3
Prostate MDAPCA2B 9.2
Prostate NCIH660 10.1
Prostate PC3 10.1
Prostate VCAP 9.1
Salivary gland A253 8.4
Salivary gland YD15 8.7
Skin A101D 9.5
Skin A2058 10
Skin A375 10
Skin C32 9.4
Skin CHL1 10.3
Skin CJM 9.5
Skin COLO679 9.6
Skin COLO741 9.7
Skin COLO783 9.9
Skin COLO792 9.7
Skin COLO800 10.3
Skin COLO818 9.8
Skin COLO829 9.7
Skin COLO849 10.2
Skin G361 10.1
Skin GRM 9.9
Skin HMCB 10.6
Skin HS294T 9.7
Skin HS600T 9.7
Skin HS688AT 9.5
Skin HS695T 9.5
Skin HS839T 9.6
Skin HS852T 9.2
Skin HS895T 8.8
Skin HS934T 9.8
Skin HS936T 9.6
Skin HS939T 9.2
Skin HS940T 9.4
Skin HS944T 9.7
Skin HT144 9.2
Skin IGR1 8.7
Skin IGR37 10.1
Skin IGR39 10.1
Skin IPC298 9.7
Skin K029AX 9
Skin LOXIMVI 9.1
Skin MALME3M 8.4
Skin MDAMB435S 9.3
Skin MELHO 9.4
Skin MELJUSO 9.1
Skin MEWO 10.1
Skin RPMI7951 9.6
Skin RVH421 9.3
Skin SH4 9.4
Skin SKMEL1 10
Skin SKMEL24 8.5
Skin SKMEL28 10.4
Skin SKMEL2 9.6
Skin SKMEL30 10
Skin SKMEL31 9.9
Skin SKMEL3 9.5
Skin SKMEL5 9.3
Skin UACC257 8.9
Skin UACC62 9.8
Skin WM115 8.8
Skin WM1799 9.4
Skin WM2664 8.9
Skin WM793 9.5
Skin WM88 9.1
Skin WM983B 10.1
Small intestine HUTU80 9.8
Soft tissue A204 10.4
Soft tissue G401 10.6
Soft tissue G402 10.4
Soft tissue GCT 9.9
Soft tissue HS729 9.6
Soft tissue HT1080 9.6
Soft tissue KYM1 10.3
Soft tissue MESSA 10.6
Soft tissue RD 10.1
Soft tissue RH30 10.5
Soft tissue RH41 11.6
Soft tissue RKN 9.7
Soft tissue S117 10.1
Soft tissue SJRH30 11
Soft tissue SKLMS1 9.7
Soft tissue SKUT1 10
Soft tissue TE125T 9.2
Soft tissue TE159T 9.9
Soft tissue TE441T 10.6
Soft tissue TE617T 10.6
Stomach 2313287 8.3
Stomach AGS 9.5
Stomach AZ521 9.7
Stomach ECC10 10.2
Stomach ECC12 10.3
Stomach FU97 11.2
Stomach GCIY 9.3
Stomach GSS 9.6
Stomach GSU 8.8
Stomach HGC27 9.8
Stomach HS746T 10.3
Stomach HUG1N 9.3
Stomach IM95 9
Stomach KATOIII 9.3
Stomach KE39 8.7
Stomach LMSU 9.9
Stomach MKN1 9.9
Stomach MKN45 9.4
Stomach MKN74 8.8
Stomach MKN7 8.9
Stomach NCCSTCK140 8.7
Stomach NCIN87 9.2
Stomach NUGC2 9.6
Stomach NUGC3 9.4
Stomach NUGC4 8.8
Stomach OCUM1 9
Stomach RERFGC1B 9.9
Stomach SH10TC 9.2
Stomach SNU16 9.5
Stomach SNU1 10.5
Stomach SNU216 10.5
Stomach SNU520 8.9
Stomach SNU5 9.4
Stomach SNU601 9.9
Stomach SNU620 8.8
Stomach SNU668 9.1
Stomach SNU719 9.2
Stomach TGBC11TKB 9.7
Thyroid 8305C 10.1
Thyroid 8505C 9.7
Thyroid BCPAP 10.9
Thyroid BHT101 9.9
Thyroid CAL62 9.6
Thyroid CGTHW1 9.9
Thyroid FTC133 10.1
Thyroid FTC238 10
Thyroid ML1 9.7
Thyroid SW579 9.3
Thyroid TT2609C02 10.2
Thyroid TT 9
Upper aerodigestive tract BHY 9
Upper aerodigestive tract BICR16 9.4
Upper aerodigestive tract BICR18 9.3
Upper aerodigestive tract BICR22 9.4
Upper aerodigestive tract BICR31 9.9
Upper aerodigestive tract BICR56 9.8
Upper aerodigestive tract BICR6 9.8
Upper aerodigestive tract CAL27 9.2
Upper aerodigestive tract CAL33 10.1
Upper aerodigestive tract DETROIT562 8.7
Upper aerodigestive tract FADU 9.4
Upper aerodigestive tract HS840T 9.7
Upper aerodigestive tract HSC2 8.6
Upper aerodigestive tract HSC3 8.4
Upper aerodigestive tract HSC4 8.8
Upper aerodigestive tract PECAPJ15 9.9
Upper aerodigestive tract PECAPJ34CLONEC12 9.8
Upper aerodigestive tract PECAPJ41CLONED2 9
Upper aerodigestive tract PECAPJ49 10.1
Upper aerodigestive tract SCC15 9.5
Upper aerodigestive tract SCC25 9.6
Upper aerodigestive tract SCC4 9.6
Upper aerodigestive tract SCC9 9.9
Upper aerodigestive tract SNU1076 9.4
Upper aerodigestive tract SNU1214 8.5
Upper aerodigestive tract SNU46 9.3
Upper aerodigestive tract SNU899 9.5
Upper aerodigestive tract YD10B 9.5
Upper aerodigestive tract YD38 9.6
Upper aerodigestive tract YD8 9.3
Urinary tract 5637 9.7
Urinary tract 639V 10
Urinary tract 647V 9.6
Urinary tract BC3C 9.3
Urinary tract BFTC905 8.7
Urinary tract CAL29 9.5
Urinary tract HS172T 9.3
Urinary tract HT1197 9.3
Urinary tract HT1376 10.7
Urinary tract J82 9.4
Urinary tract JMSU1 10.8
Urinary tract KMBC2 8.7
Urinary tract KU1919 10.3
Urinary tract RT11284 9.8
Urinary tract RT112 9.7
Urinary tract RT4 8.9
Urinary tract SCABER 8.6
Urinary tract SW1710 10.5
Urinary tract SW780 9.9
Urinary tract T24 10.3
Urinary tract TCCSUP 9.6
Urinary tract UMUC1 9.2
Urinary tract UMUC3 9.5
Urinary tract VMCUB1 9.7
> The Human Protein Atlas (HPA)
 


Tissue Expression Level (TPM)
Adipose tissue 11.7
Adrenal gland 9.3
Appendix 6.5
Bone marrow 5.6
Breast 8.2
Cerebral cortex 12.2
Cervix, uterine 13
Colon 4.6
Duodenum 5.3
Endometrium 20.2
Epididymis 11.9
Esophagus 11.6
Fallopian tube 12.2
Gallbladder 16.3
Heart muscle 3.6
Kidney 5.1
Liver 6.2
Lung 9.2
Lymph node 7
Ovary 14.5
Pancreas 2
Parathyroid gland 11.4
Placenta 11.1
Prostate 14.2
Rectum 3.8
Salivary gland 4.2
Seminal vesicle 14.3
Skeletal muscle 2.2
Skin 11.6
Small intestine 5.1
Smooth muscle 11.6
Spleen 8.4
Stomach 4.6
Testis 58.8
Thyroid gland 8.8
Tonsil 5.4
Urinary bladder 8
> Text Mining based Expression
 
PMID Expression Cancer Evidence
15825179OverexpressionOvarian CarcinomaIn addition, high SPOC1 mRNA expression was observed in several ovarian cancer cell lines.
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Somatic copy number alteration in primary tomur tissue
> The Cancer Genome Atlas (TCGA)
 


  Correlation between expression and SCNA as well as percentage of patients in different status.
Cancer Full Name # Sample R P % Loss % Neutral % Gain Status
BLCABladder urothelial carcinoma4040.4943.17e-2619.158.722.3Neutral
BRCABreast invasive carcinoma10750.5027.64e-704052.87.2Loss
CESCCervical and endocervical cancers2920.5736.25e-271359.927.1Neutral
COADColon adenocarcinoma4490.4581.08e-2433.963.52.7Loss
ESCAEsophageal carcinoma1830.4596.39e-113545.919.1Loss
GBMGlioblastoma multiforme1470.5838.91e-1522.460.517Neutral
HNSCHead and Neck squamous cell carcinoma5140.4893.47e-3217.77012.3Neutral
KIRCKidney renal clear cell carcinoma5250.4581.32e-2819.4791.5Neutral
KIRPKidney renal papillary cell carcinoma2880.4526.23e-1618.880.90.3Neutral
LAMLAcute Myeloid Leukemia1660.1490.05581.296.42.4Neutral
LGGBrain Lower Grade Glioma5130.8022.77e-11641.156.72.1Loss
LIHCLiver hepatocellular carcinoma3640.5137.11e-2643.150.86Loss
LUADLung adenocarcinoma5120.4931.01e-3221.753.724.6Neutral
LUSCLung squamous cell carcinoma4980.532.26e-374344.212.9Loss
OVOvarian serous cystadenocarcinoma3000.7153.07e-4832.33730.7Neutral
PAADPancreatic adenocarcinoma1770.4781.72e-1128.863.87.3Neutral
PCPGPheochromocytoma and Paraganglioma1620.6032.12e-1763.635.80.6Loss
PRADProstate adenocarcinoma4910.1550.00058910.288.81Neutral
READRectum adenocarcinoma1640.5634.25e-1542.755.51.8Loss
SARCSarcoma2550.3471.28e-0823.547.828.6Neutral
SKCMSkin Cutaneous Melanoma3670.5837.43e-3520.458.920.7Neutral
STADStomach adenocarcinoma4130.4423.41e-2123.563.413.1Neutral
TGCTTesticular Germ Cell Tumors1500.1580.05422.761.316Neutral
THCAThyroid carcinoma4970.0580.196198.60.4Neutral
THYMThymoma1190.2490.006346.792.40.8Neutral
UCECUterine Corpus Endometrial Carcinoma5370.4565.81e-2912.578.29.3Neutral
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Methylation level in the promoter region of CR
> Methylation level in the promoter region of CR
 


  Correlation between expression and methylation as well as differential methylation analysis.
Cancer Full Name R P # N # T Delta beta (T vs N) P value (T vs N) Status
BLCABladder urothelial carcinoma-0.2521.61e-0717408-0.2222.59e-11Decreased
BRCABreast invasive carcinoma-0.345083785-0.0220.0236NS/NA
CESCCervical and endocervical cancers-0.3151.84e-083306NANANS/NA
COADColon adenocarcinoma-0.1890.000746192970.0020.342NS/NA
ESCAEsophageal carcinoma-0.2290.001399185NANANS/NA
GBMGlioblastoma multiforme-0.3990.00109164NANANS/NA
HNSCHead and Neck squamous cell carcinoma-0.2972.02e-12205220.0711.34e-05NS/NA
KIRCKidney renal clear cell carcinoma-0.1150.0334243190.1582.43e-08NS/NA
KIRPKidney renal papillary cell carcinoma-0.3315.86e-09232750.0020.764NS/NA
LAMLAcute Myeloid Leukemia-0.2140.005240170NANANS/NA
LGGBrain Lower Grade Glioma-0.45400530NANANS/NA
LIHCLiver hepatocellular carcinoma-0.3241.92e-114137300.245NS/NA
LUADLung adenocarcinoma-0.1893.28e-0521456-0.111.12e-09NS/NA
LUSCLung squamous cell carcinoma-0.2671.52e-078370NANANS/NA
OVOvarian serous cystadenocarcinoma-0.8330.0082709NANANS/NA
PAADPancreatic adenocarcinoma-0.2140.003654179NANANS/NA
PCPGPheochromocytoma and Paraganglioma-0.4212.7e-093184NANANS/NA
PRADProstate adenocarcinoma-0.0680.11835498-0.0091.15e-05NS/NA
READRectum adenocarcinoma-0.230.0208299NANANS/NA
SARCSarcoma-0.3525.84e-090263NANANS/NA
SKCMSkin Cutaneous Melanoma-0.3256.33e-131471NANANS/NA
STADStomach adenocarcinoma-0.1940.000170372NANANS/NA
TGCTTesticular Germ Cell Tumors-0.64500156NANANS/NA
THCAThyroid carcinoma-0.281.94e-1150509-0.1453.89e-37NS/NA
THYMThymoma-0.534.58e-102120NANANS/NA
UCECUterine Corpus Endometrial Carcinoma-0.1570.0006893443100.0705NS/NA
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Primary tumor tissue from TCGA
> Normal tumor tissue from HPA
>The Cancer Genome Atlas (TCGA)
 
There is no record.
> The Human Protein Atlas (HPA)
 


Tissue Level Level Name
Adrenal gland 2 Medium
Appendix 2 Medium
Bone marrow 0 Not detected
Breast 0 Not detected
Bronchus 2 Medium
Caudate 1 Low
Cerebellum 2 Medium
Cerebral cortex 2 Medium
Cervix, uterine 0 Not detected
Colon 2 Medium
Duodenum 1 Low
Endometrium 1 Low
Epididymis 2 Medium
Esophagus 0 Not detected
Fallopian tube 1 Low
Gallbladder 2 Medium
Heart muscle 1 Low
Hippocampus 1 Low
Kidney 2 Medium
Liver 2 Medium
Lung 1 Low
Lymph node 0 Not detected
Nasopharynx 0 Not detected
Oral mucosa 0 Not detected
Ovary 1 Low
Pancreas 2 Medium
Parathyroid gland 2 Medium
Placenta 1 Low
Prostate 1 Low
Rectum 2 Medium
Salivary gland 0 Not detected
Seminal vesicle 2 Medium
Skeletal muscle 0 Not detected
Skin 0 Not detected
Small intestine 2 Medium
Smooth muscle 0 Not detected
Soft tissue 0 Not detected
Spleen 0 Not detected
Stomach 2 Medium
Testis 2 Medium
Thyroid gland 1 Low
Tonsil 2 Medium
Urinary bladder 2 Medium
Vagina 0 Not detected
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Association between expresson and subtype
> Overall survival analysis based on expression
> Association between expresson and stage
> Association between expresson and grade
> Subtype
 


  Association between expresson and subtype.
Cancer Full Name # Patients P Value (Kruskal-Wallis) Association Source
BLCABladder urothelial carcinoma1280.252NS24476821
BRCABreast invasive carcinoma5210.0249Significant23000897
COADColon adenocarcinoma1490.804NS22810696
GBMGlioblastoma multiforme1570.0104Significant26824661
HNSCHead and Neck squamous cell carcinoma2790.000362Significant25631445
KIRPKidney renal papillary cell carcinoma1610.2NS26536169
LGGBrain Lower Grade Glioma5135.38e-66Significant26824661
LUADLung adenocarcinoma2300.000234Significant25079552
LUSCLung squamous cell carcinoma1780.00539Significant22960745
OVOvarian serous cystadenocarcinoma2870.0151Significant21720365
PRADProstate adenocarcinoma3330.607NS26544944
READRectum adenocarcinoma670.1NS22810696
SKCMSkin Cutaneous Melanoma3150.0979NS26091043
STADStomach adenocarcinoma2770.109NS25079317
THCAThyroid carcinoma3913.03e-26Significant25417114
UCECUterine Corpus Endometrial Carcinoma2320.024Significant23636398
> Overall survival
 

  Overall survival analysis based on expression.
Cancer Full Name # Patients Hazard Ratio P Value (Log Rank Test) Association
BLCABladder urothelial carcinoma405 1.3530.167NS
BRCABreast invasive carcinoma1079 0.7580.224NS
CESCCervical and endocervical cancers291 0.8580.673NS
COADColon adenocarcinoma439 1.2820.369NS
ESCAEsophageal carcinoma184 0.9710.931NS
GBMGlioblastoma multiforme158 1.0240.927NS
HNSCHead and Neck squamous cell carcinoma518 0.8810.518NS
KIRCKidney renal clear cell carcinoma531 1.560.0372Shorter
KIRPKidney renal papillary cell carcinoma287 1.3470.516NS
LAMLAcute Myeloid Leukemia149 0.9330.827NS
LGGBrain Lower Grade Glioma511 3.6075.31e-06Shorter
LIHCLiver hepatocellular carcinoma365 1.6980.0484Shorter
LUADLung adenocarcinoma502 1.0490.823NS
LUSCLung squamous cell carcinoma494 1.2280.285NS
OVOvarian serous cystadenocarcinoma303 1.0130.953NS
PAADPancreatic adenocarcinoma177 1.8530.0439Shorter
PCPGPheochromocytoma and Paraganglioma179 572760843.2020.165NS
PRADProstate adenocarcinoma497 0.1850.0298Longer
READRectum adenocarcinoma159 1.9240.185NS
SARCSarcoma259 1.550.138NS
SKCMSkin Cutaneous Melanoma459 1.0380.847NS
STADStomach adenocarcinoma388 0.9790.928NS
TGCTTesticular Germ Cell Tumors134 0.4580.513NS
THCAThyroid carcinoma500 1.2190.782NS
THYMThymoma119 0.7470.745NS
UCECUterine Corpus Endometrial Carcinoma543 1.6370.0889NS
> Stage
 

  Association between expresson and stage.
Cancer Full Name # Patients R Value (Spearman) P Value (Spearman) Association
BLCABladder urothelial carcinoma406 0.1170.0185Higher
BRCABreast invasive carcinoma1071 -0.040.19NS
CESCCervical and endocervical cancers167 -0.0230.768NS
COADColon adenocarcinoma445 0.0480.308NS
ESCAEsophageal carcinoma162 -0.0810.307NS
HNSCHead and Neck squamous cell carcinoma448 0.1943.68e-05Higher
KIRCKidney renal clear cell carcinoma531 0.0730.0925NS
KIRPKidney renal papillary cell carcinoma260 -0.030.635NS
LIHCLiver hepatocellular carcinoma347 0.0570.287NS
LUADLung adenocarcinoma507 0.0130.777NS
LUSCLung squamous cell carcinoma497 -0.0360.422NS
OVOvarian serous cystadenocarcinoma302 -0.0470.418NS
PAADPancreatic adenocarcinoma176 0.1950.00966Higher
READRectum adenocarcinoma156 0.1270.114NS
SKCMSkin Cutaneous Melanoma410 0.0020.964NS
STADStomach adenocarcinoma392 -0.1170.0207Lower
TGCTTesticular Germ Cell Tumors81 -0.3380.002Lower
THCAThyroid carcinoma499 0.1749.1e-05Higher
UCECUterine Corpus Endometrial Carcinoma501 0.0780.0813NS
> Grade
 

  Association between expresson and grade.
Cancer Full Name # Patients R Value (Spearman) P Value (Spearman) Association
CESCCervical and endocervical cancers272 -0.090.139NS
HNSCHead and Neck squamous cell carcinoma498 0.1070.017Higher
KIRCKidney renal clear cell carcinoma525 0.0470.283NS
LGGBrain Lower Grade Glioma514 0.1580.000314Higher
LIHCLiver hepatocellular carcinoma366 0.0070.9NS
OVOvarian serous cystadenocarcinoma296 -0.0440.455NS
PAADPancreatic adenocarcinoma176 0.1380.0668NS
STADStomach adenocarcinoma406 0.0490.325NS
UCECUterine Corpus Endometrial Carcinoma534 0.3415.68e-16Higher
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Targets inferred by reverse engineering method
> Targets identified by ChIP-seq data
> Targets inferred by reverse engineering method
 
> Targets identified by ChIP-seq data
 
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Drugs from DrugBank database
> Drugs from DrugBank database
 
There is no record for PHF13.
Summary
SymbolPHF13
NamePHD finger protein 13
Aliases MGC43399; PHF5; SPOC1; PHD zinc finger protein PHF5; survival time-associated PHD finger protein in ovarian ......
Location1p36.31
External Links HGNC, NCBI, Ensembl, Uniprot, GeneCards
Cancer Gene Databases ONGene (Oncogene) , TSGene (Tumor suppressor gene) , NCG (Network of Cancer Genes)
Content > Protein-Protein Interaction Network
> miRNA Regulatory Relationship
> Interactions from Text Mining
> Protein-Protein Interaction Network
 
> miRNA Regulatory Relationship
 
> Interactions from Text Mining
 
There is no record for PHF13.