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This regulatory network was inferred from the input dataset. The miRNAs and mRNAs are presented as round and rectangle nodes respectively. The numerical value popped up upon mouse over the gene node is the log2 transformed fold-change of the gene expression between the two groups. All of the nodes are clickable, and the detailed information of the miRNAs/mRNAs and related cancer pathway will be displayed in another window. The edges between nodes are supported by both interactions (predicted or experimentally verified) and correlations learnt from cancer dataset. The numerical value popped up upon mouse over the edge is the correlation beat value (effect size) between the two nodes. The experimental evidences of the edges reported in previous cancer studies are highlighted by red/orange color. All of these information can be accessed by the "mouse-over" action. This network shows a full map of the miRNA-mRNA regulation of the input gene list(s), and the hub miRNAs (with the high network degree/betweenness centrality) would be the potential cancer drivers or tumor suppressors. The full result table can be accessed in the "Regulations" tab.

"miRNACancerMAP" is also a network visualization tool for users to draw their regulatory network by personal customization. Users can set the complexity of the network by limiting the number of nodes or edges. And the color of the nodes can be defined by different categories of the mRNAs and miRNAs, such as Gene-Ontology, pathway, and expression status. Users can also select to use network degree or network betweenness centrality to define the node size. And edges can be black or colored by the correlation. Purple edge means negative correlation (mostly found between miRNA and mRNA), and blue edge means positive correlation (found in PPI or miRNA-miRNA sponge effect). We can also add the protein-protein interactions (PPI) into the network. This result will show the cluster of genes regulated by some specific miRNAs. Additionally, miRNA-miRNA edges can be added by the "miRNA sponge" button, presenting some clusters of miRNAs that have the interactions via sponge effect.

miRNA-gene regulations

(Download full result)

Num microRNA           Gene miRNA log2FC miRNA pvalue Gene log2FC Gene pvalue Interaction Correlation beta Correlation P-value PMID Reported in cancer studies
1 hsa-miR-20b-5p AADAC -1.45 0.00948 3.68 0.00236 MirTarget -0.39 0.01619 NA
2 hsa-miR-342-3p AADAC -1.51 0.00036 3.68 0.00236 miRanda -0.71 0.00076 NA
3 hsa-miR-381-3p AADAC -0.14 0.78107 3.68 0.00236 MirTarget -0.37 0.0388 NA
4 hsa-miR-126-5p ABCA12 -1.4 0.0002 5.05 3.0E-5 mirMAP -0.75 0.00166 NA
5 hsa-miR-320c ABCA12 -0.2 0.68946 5.05 3.0E-5 miRanda; miRNATAP -0.4 0.03911 NA
6 hsa-miR-335-5p ABCA12 -0.91 0.05683 5.05 3.0E-5 miRNAWalker2 validate -0.66 0.0005 NA
7 hsa-miR-338-3p ABCA12 0.51 0.34448 5.05 3.0E-5 MirTarget; miRanda -0.52 0.00195 NA
8 hsa-miR-33a-3p ABCA12 -1.71 0.00034 5.05 3.0E-5 mirMAP -0.59 0.00225 NA
9 hsa-miR-361-3p ABCA12 -0.26 0.36923 5.05 3.0E-5 MirTarget -1.21 0.00015 NA
10 hsa-miR-362-3p ABCA12 -1.21 0.01257 5.05 3.0E-5 miRanda; miRNATAP -0.47 0.01341 NA
11 hsa-miR-409-3p ABCA12 -0.55 0.29261 5.05 3.0E-5 PITA -0.36 0.03914 NA
12 hsa-miR-139-5p ABCA13 -1.64 0.00654 2.71 0.0092 miRanda -0.61 0 NA
13 hsa-miR-148b-3p ABCA13 -0.1 0.7723 2.71 0.0092 miRNAWalker2 validate -1.24 0 NA
14 hsa-miR-154-3p ABCA13 -0.64 0.23454 2.71 0.0092 MirTarget -0.39 0.00629 NA
15 hsa-miR-16-1-3p ABCA13 -0.62 0.12369 2.71 0.0092 MirTarget -0.43 0.02886 NA
16 hsa-miR-3065-5p ABCA13 0.74 0.29684 2.71 0.0092 mirMAP -0.36 0.00087 NA
17 hsa-miR-30d-3p ABCA13 -0.36 0.32354 2.71 0.0092 MirTarget -0.49 0.02168 NA
18 hsa-miR-320c ABCA13 -0.2 0.68946 2.71 0.0092 miRanda -0.34 0.03989 NA
19 hsa-miR-324-5p ABCA13 -0.99 0.00957 2.71 0.0092 miRanda -0.92 0 NA
20 hsa-miR-338-3p ABCA13 0.51 0.34448 2.71 0.0092 miRanda -0.28 0.04712 NA
21 hsa-miR-339-5p ABCA13 -0.92 0.04335 2.71 0.0092 miRanda -0.44 0.00934 NA
22 hsa-miR-3613-3p ABCA13 -0.97 0.05661 2.71 0.0092 MirTarget; mirMAP -0.34 0.03058 NA
23 hsa-miR-362-3p ABCA13 -1.21 0.01257 2.71 0.0092 miRanda -0.41 0.0112 NA
24 hsa-miR-362-5p ABCA13 -0.73 0.11206 2.71 0.0092 MirTarget -0.57 0.0007 NA
25 hsa-miR-421 ABCA13 -0.18 0.69194 2.71 0.0092 miRanda -0.42 0.01738 NA
26 hsa-miR-487a-3p ABCA13 0.17 0.76849 2.71 0.0092 MirTarget -0.61 1.0E-5 NA
27 hsa-miR-491-5p ABCA13 -0.79 0.12393 2.71 0.0092 miRanda -0.42 0.00603 NA
28 hsa-miR-496 ABCA13 -0.26 0.66888 2.71 0.0092 miRanda -0.29 0.0197 NA
29 hsa-miR-500a-5p ABCA13 -1.1 0.01791 2.71 0.0092 MirTarget -0.47 0.00419 NA
30 hsa-miR-500b-5p ABCA13 -1.1 0.01787 2.71 0.0092 MirTarget -0.47 0.0042 NA
31 hsa-miR-543 ABCA13 -1.03 0.07135 2.71 0.0092 miRanda -0.44 0.00099 NA
32 hsa-miR-590-3p ABCA13 -0.92 0.03456 2.71 0.0092 miRanda; mirMAP -0.43 0.01579 NA
33 hsa-miR-590-5p ABCA13 -0.98 0.00534 2.71 0.0092 miRanda -0.61 0.00556 NA
34 hsa-miR-628-3p ABCA13 -1.92 0.00404 2.71 0.0092 MirTarget -0.5 1.0E-5 NA
35 hsa-miR-7-1-3p ABCA13 -0.73 0.0834 2.71 0.0092 mirMAP -0.56 0.00242 NA
36 hsa-miR-7-5p ABCA13 0.82 0.51059 2.71 0.0092 MirTarget -0.36 0 NA
37 hsa-miR-320b ACSM5 -0.27 0.55127 -2.35 0.00202 miRanda -0.26 0.03838 NA
38 hsa-miR-3127-5p ADRA1D -0.4 0.31817 -2.38 0.00066 MirTarget -0.52 6.0E-5 NA
39 hsa-miR-197-3p AGR2 -0.93 0.00091 6.37 0 miRNAWalker2 validate -0.99 0.00474 NA
40 hsa-miR-335-5p AGR2 -0.91 0.05683 6.37 0 miRNAWalker2 validate -0.56 0.00578 NA
41 hsa-miR-342-3p AGR2 -1.51 0.00036 6.37 0 miRanda -1.18 0 NA
42 hsa-miR-361-5p AGR2 -0.3 0.18864 6.37 0 miRanda -2.46 0 NA
43 hsa-miR-543 AGR2 -1.03 0.07135 6.37 0 miRanda -0.81 0 NA
44 hsa-miR-590-3p AGR2 -0.92 0.03456 6.37 0 miRanda -0.71 0.00147 NA
45 hsa-miR-137 AGR3 -0.08 0.93052 4.01 0.00125 miRanda -0.25 0.02171 NA
46 hsa-miR-335-5p AGR3 -0.91 0.05683 4.01 0.00125 miRNAWalker2 validate -0.4 0.03706 NA
47 hsa-miR-543 AGR3 -1.03 0.07135 4.01 0.00125 miRanda -0.69 1.0E-5 NA
48 hsa-miR-590-3p AGR3 -0.92 0.03456 4.01 0.00125 miRanda -0.51 0.01762 NA
49 hsa-miR-330-3p AIM1L 0.23 0.63792 3.48 0.00047 PITA -0.52 0.00079 NA
50 hsa-miR-338-3p AIM1L 0.51 0.34448 3.48 0.00047 miRanda -0.39 0.0047 NA
51 hsa-miR-543 AIM1L -1.03 0.07135 3.48 0.00047 miRanda; miRNATAP -0.73 0 NA
52 hsa-miR-590-5p AIM1L -0.98 0.00534 3.48 0.00047 miRanda; miRNATAP -0.51 0.01609 NA
53 hsa-miR-361-5p AKR1B10 -0.3 0.18864 4.03 0.00721 miRanda -1.67 0.00104 NA
54 hsa-miR-98-5p AKR1B10 -0.22 0.42277 4.03 0.00721 miRNAWalker2 validate -2 0 NA
55 hsa-miR-1226-3p AKR1C4 -0.64 0.1985 3.77 0.00309 MirTarget -0.42 0.03805 NA
56 hsa-miR-129-5p ALDH3A1 1.01 0.36712 3.37 0.0088 MirTarget -0.34 4.0E-5 NA
57 hsa-miR-299-3p ALDH3A1 -1.2 0.03353 3.37 0.0088 miRanda -0.5 0.00358 NA
58 hsa-miR-542-3p ANKS4B -0.89 0.02064 4.09 9.0E-5 miRanda -0.49 0.01707 NA
59 hsa-miR-766-3p ANKS4B -1.21 0.00153 4.09 9.0E-5 MirTarget -0.42 0.04386 NA
60 hsa-miR-486-5p ANXA13 -1.43 0.04021 3.41 0.00365 miRanda -0.25 0.0464 NA
61 hsa-miR-590-3p ANXA13 -0.92 0.03456 3.41 0.00365 miRanda -0.47 0.02019 NA
62 hsa-miR-93-3p ANXA13 -1.17 0.00228 3.41 0.00365 MirTarget -0.65 0.00424 NA
63 hsa-miR-326 AP1M2 -0.75 0.13947 2.16 2.0E-5 miRNATAP -0.18 0.01699 NA
64 hsa-miR-342-3p AP1M2 -1.51 0.00036 2.16 2.0E-5 miRanda -0.52 0 NA
65 hsa-miR-129-5p APOBEC1 1.01 0.36712 4.29 0.00238 MirTarget -0.32 0.00051 NA
66 hsa-miR-137 APOBEC1 -0.08 0.93052 4.29 0.00238 miRanda -0.29 0.01725 NA
67 hsa-miR-139-5p APOBEC1 -1.64 0.00654 4.29 0.00238 miRanda -0.92 0 NA
68 hsa-miR-185-3p AQP5 -0.81 0.0588 4.91 0.00121 MirTarget -1.03 9.0E-5 NA
69 hsa-miR-296-3p AQP5 -0.4 0.5034 4.91 0.00121 miRanda -0.64 0.00422 NA
70 hsa-miR-335-5p AQP5 -0.91 0.05683 4.91 0.00121 miRNAWalker2 validate -0.57 0.01636 NA
71 hsa-miR-671-5p AQP6 -0.16 0.729 3.11 0.0022 miRNATAP -0.43 0.00838 NA
72 hsa-miR-129-5p AREG 1.01 0.36712 3.07 0.00057 miRanda -0.24 5.0E-5 NA
73 hsa-miR-335-5p AREG -0.91 0.05683 3.07 0.00057 miRNAWalker2 validate -0.44 0.00143 NA
74 hsa-miR-199a-5p ASPHD1 -0.21 0.63598 2.1 0.00029 miRanda -0.32 0.00118 NA
75 hsa-miR-199b-5p ASPHD1 0.44 0.43893 2.1 0.00029 miRanda -0.17 0.02659 NA
76 hsa-miR-28-5p ASPHD1 -0.53 0.03042 2.1 0.00029 miRanda -0.5 0.00697 NA
77 hsa-miR-128-3p AZGP1 0.03 0.92123 2.93 0.00619 miRNAWalker2 validate -0.96 3.0E-5 NA
78 hsa-miR-139-5p AZGP1 -1.64 0.00654 2.93 0.00619 miRanda -0.54 3.0E-5 NA
79 hsa-miR-324-5p AZGP1 -0.99 0.00957 2.93 0.00619 miRanda -0.91 1.0E-5 NA
80 hsa-miR-330-5p AZGP1 0.65 0.08635 2.93 0.00619 miRanda -0.43 0.04457 NA
81 hsa-miR-139-5p B3GALT5 -1.64 0.00654 2.54 0.00623 miRanda -0.5 1.0E-5 NA
82 hsa-miR-140-5p B3GALT5 -1.2 4.0E-5 2.54 0.00623 MirTarget; miRanda -0.64 0.00647 NA
83 hsa-miR-484 B3GALT5 -1.18 5.0E-5 2.54 0.00623 miRNATAP -0.72 0.00218 NA
84 hsa-miR-590-3p B3GALT5 -0.92 0.03456 2.54 0.00623 miRanda -0.55 0.00041 NA
85 hsa-miR-101-3p B3GNT3 -0.27 0.36572 4.44 0 MirTarget -0.96 1.0E-5 NA
86 hsa-miR-125a-5p B3GNT3 -0.31 0.3708 4.44 0 MirTarget -0.81 1.0E-5 NA
87 hsa-miR-188-3p B3GNT3 -0.19 0.71453 4.44 0 MirTarget -0.41 0.00098 NA
88 hsa-miR-299-3p B3GNT3 -1.2 0.03353 4.44 0 miRanda -0.29 0.0109 NA
89 hsa-miR-324-5p B3GNT3 -0.99 0.00957 4.44 0 miRanda -0.7 2.0E-5 NA
90 hsa-miR-335-5p B3GNT3 -0.91 0.05683 4.44 0 miRNAWalker2 validate -0.3 0.02061 NA
91 hsa-miR-342-3p B3GNT3 -1.51 0.00036 4.44 0 miRanda -0.74 0 NA
92 hsa-miR-491-5p B3GNT3 -0.79 0.12393 4.44 0 miRanda -0.46 0.00018 NA
93 hsa-miR-590-3p B3GNT3 -0.92 0.03456 4.44 0 miRanda -0.44 0.00228 NA
94 hsa-miR-103a-2-5p BCAS1 -2.06 0.00116 3.1 0.00836 mirMAP -0.32 0.02129 NA
95 hsa-miR-126-5p BCAS1 -1.4 0.0002 3.1 0.00836 mirMAP -0.83 0.00026 NA
96 hsa-miR-129-5p BCAS1 1.01 0.36712 3.1 0.00836 mirMAP -0.42 0 NA
97 hsa-miR-330-3p BCAS1 0.23 0.63792 3.1 0.00836 mirMAP -0.68 0.00018 NA
98 hsa-miR-361-5p BCAS1 -0.3 0.18864 3.1 0.00836 miRanda; miRNATAP -1.71 1.0E-5 NA
99 hsa-miR-3613-3p BCAS1 -0.97 0.05661 3.1 0.00836 mirMAP -0.47 0.0072 NA
100 hsa-miR-369-3p BCAS1 -0.83 0.17364 3.1 0.00836 PITA -0.89 0 NA
101 hsa-miR-382-5p BCAS1 -0.31 0.51552 3.1 0.00836 MirTarget; mirMAP -0.87 0 NA
102 hsa-miR-494-3p BCAS1 -0.99 0.0855 3.1 0.00836 MirTarget -0.62 4.0E-5 NA
103 hsa-miR-495-3p BCAS1 -0.82 0.09306 3.1 0.00836 mirMAP -0.92 0 NA
104 hsa-miR-539-5p BCAS1 -0.74 0.25997 3.1 0.00836 mirMAP -0.75 0 NA
105 hsa-miR-590-3p BCAS1 -0.92 0.03456 3.1 0.00836 mirMAP -0.49 0.01523 NA
106 hsa-miR-664a-3p BCAS1 -0.55 0.06802 3.1 0.00836 mirMAP -1.23 3.0E-5 NA
107 hsa-miR-24-1-5p BTK -0.73 0.02922 -2.25 0.00188 MirTarget -0.33 0.0434 NA
108 hsa-miR-590-5p BTK -0.98 0.00534 -2.25 0.00188 miRanda -0.37 0.01471 NA
109 hsa-miR-590-3p C11orf70 -0.92 0.03456 2.16 7.0E-5 mirMAP -0.36 0.00011 NA
110 hsa-miR-148b-3p C1orf116 -0.1 0.7723 2.8 1.0E-5 mirMAP -0.31 0.03085 NA
111 hsa-miR-301a-3p C1orf116 -0.76 0.09613 2.8 1.0E-5 mirMAP -0.24 0.02138 NA
112 hsa-miR-340-5p C1orf116 -0.87 0.0362 2.8 1.0E-5 mirMAP -0.25 0.02677 NA
113 hsa-miR-374a-5p C1orf116 -0.77 0.02145 2.8 1.0E-5 mirMAP -0.37 0.01045 NA
114 hsa-miR-374b-5p C1orf116 -0.94 0.0014 2.8 1.0E-5 mirMAP -0.43 0.00838 NA
115 hsa-miR-483-3p C1orf116 -0.39 0.59969 2.8 1.0E-5 mirMAP -0.14 0.03604 NA
116 hsa-miR-542-3p C1orf116 -0.89 0.02064 2.8 1.0E-5 mirMAP -0.25 0.04308 NA
117 hsa-miR-10b-5p C2orf72 -1.16 0.0029 2.85 0.00038 mirMAP -0.59 0.0001 NA
118 hsa-miR-15b-5p C2orf72 -1.17 6.0E-5 2.85 0.00038 miRNATAP -0.44 0.03376 NA
119 hsa-miR-16-5p C2orf72 -1.02 0.00033 2.85 0.00038 miRNATAP -0.68 0.00123 NA
120 hsa-miR-214-3p C2orf72 -1.04 0.04357 2.85 0.00038 mirMAP -0.29 0.01196 NA
121 hsa-miR-221-5p C2orf72 -0.34 0.46719 2.85 0.00038 mirMAP -0.61 0 NA
122 hsa-miR-505-3p C2orf72 -1.26 0.00026 2.85 0.00038 miRNATAP -0.39 0.0255 NA
123 hsa-miR-98-5p CA9 -0.22 0.42277 4.64 0.00113 miRNAWalker2 validate -1.48 0.00021 NA
124 hsa-miR-1224-5p CAPN5 1.84 0.10658 2.05 0.00133 MirTarget; miRNATAP -0.19 0 NA
125 hsa-miR-186-5p CAPN5 -0.77 0.00203 2.05 0.00133 MirTarget -0.65 0.0009 NA
126 hsa-miR-20b-5p CAPN5 -1.45 0.00948 2.05 0.00133 mirMAP -0.27 0.00171 NA
127 hsa-miR-30c-5p CAPN5 -0.88 0.00777 2.05 0.00133 MirTarget; miRNATAP -0.29 0.04546 NA
128 hsa-miR-30e-5p CAPN5 -0.99 0.00042 2.05 0.00133 MirTarget -0.42 0.01542 NA
129 hsa-miR-335-5p CAPN5 -0.91 0.05683 2.05 0.00133 mirMAP -0.2 0.04462 NA
130 hsa-miR-338-3p CAPN5 0.51 0.34448 2.05 0.00133 miRNATAP -0.19 0.03438 NA
131 hsa-miR-377-3p CAPN5 -1.31 0.02275 2.05 0.00133 MirTarget -0.32 7.0E-5 NA
132 hsa-miR-409-3p CAPN5 -0.55 0.29261 2.05 0.00133 mirMAP -0.42 0 NA
133 hsa-miR-421 CAPN5 -0.18 0.69194 2.05 0.00133 miRanda -0.55 0 NA
134 hsa-miR-491-5p CAPN5 -0.79 0.12393 2.05 0.00133 MirTarget; miRanda; miRNATAP -0.29 0.00209 NA
135 hsa-miR-589-3p CAPN5 -1.1 0.0256 2.05 0.00133 mirMAP -0.2 0.03867 NA
136 hsa-miR-628-5p CAPN5 -0.85 0.02411 2.05 0.00133 MirTarget -0.63 0 NA
137 hsa-miR-93-3p CAPN8 -1.17 0.00228 5.27 1.0E-5 MirTarget -0.52 0.02701 NA
138 hsa-miR-324-5p CD33 -0.99 0.00957 -2.13 0.00056 miRanda -0.28 0.0193 NA
139 hsa-miR-335-5p CD33 -0.91 0.05683 -2.13 0.00056 miRNAWalker2 validate -0.2 0.03391 NA
140 hsa-miR-590-3p CD33 -0.92 0.03456 -2.13 0.00056 miRanda -0.25 0.01989 NA
141 hsa-miR-96-5p CD36 -0.14 0.83402 -2.44 0.0038 MirTarget -0.41 1.0E-5 NA
142 hsa-miR-107 CD37 0.04 0.89912 -2.11 0.00363 miRanda -0.52 0.00742 NA
143 hsa-miR-491-5p CD37 -0.79 0.12393 -2.11 0.00363 miRanda -0.31 0.00384 NA
144 hsa-miR-455-5p CD53 -0.23 0.54044 -2.02 0.00228 miRanda -0.58 1.0E-5 NA
145 hsa-miR-296-3p CDHR2 -0.4 0.5034 3.5 0.00796 miRanda -0.51 0.00963 NA
146 hsa-miR-335-5p CDHR2 -0.91 0.05683 3.5 0.00796 miRNAWalker2 validate -0.48 0.02006 NA
147 hsa-miR-543 CDHR5 -1.03 0.07135 3.9 0.00055 miRanda -0.47 0.0013 NA
148 hsa-miR-335-5p CEACAM3 -0.91 0.05683 -2.07 0.0076 miRNAWalker2 validate -0.25 0.03895 NA
149 hsa-miR-361-5p CEACAM3 -0.3 0.18864 -2.07 0.0076 miRanda -0.57 0.03207 NA
150 hsa-miR-491-5p CEACAM3 -0.79 0.12393 -2.07 0.0076 miRanda -0.35 0.00172 NA

Over-represented Gene Ontology Biological Process

NumGOOverlapSizeP ValueAdj. P Value
1 EPITHELIUM DEVELOPMENT 36 945 5.543e-10 2.179e-06
2 TISSUE DEVELOPMENT 47 1518 9.365e-10 2.179e-06
3 RESPONSE TO XENOBIOTIC STIMULUS 12 105 4.285e-09 6.647e-06
4 REGULATION OF MICROVILLUS ORGANIZATION 6 14 7.21e-09 8.387e-06
5 EPIDERMIS DEVELOPMENT 17 253 9.806e-09 9.125e-06
6 DIGESTION 12 137 8.745e-08 6.782e-05
7 EPITHELIAL CELL DIFFERENTIATION 20 495 2.007e-06 0.001334
8 DRUG METABOLIC PROCESS 6 39 6.113e-06 0.003555
9 DIGESTIVE SYSTEM PROCESS 7 61 7.602e-06 0.00393
10 REGULATION OF CELL PROJECTION SIZE 4 12 8.832e-06 0.00411
11 BIOLOGICAL ADHESION 29 1032 1.462e-05 0.006185
12 REGULATION OF HORMONE LEVELS 18 478 1.715e-05 0.006648
13 HORMONE METABOLIC PROCESS 10 164 2.693e-05 0.00964
NumGOOverlapSizeP ValueAdj. P Value
NumGOOverlapSizeP ValueAdj. P Value
1 INTRINSIC COMPONENT OF PLASMA MEMBRANE 49 1649 1.509e-09 8.813e-07
2 BRUSH BORDER 10 102 3.709e-07 0.0001083
3 CLUSTER OF ACTIN BASED CELL PROJECTIONS 10 139 6.331e-06 0.0009243
4 PLASMA MEMBRANE REGION 28 929 5.747e-06 0.0009243
5 CELL PROJECTION MEMBRANE 14 298 1.374e-05 0.001146
6 APICAL PLASMA MEMBRANE 14 292 1.093e-05 0.001146
7 MEMBRANE REGION 31 1134 1.244e-05 0.001146
8 APICAL PART OF CELL 15 361 2.863e-05 0.00195
9 MICROVILLUS 7 75 3.005e-05 0.00195
10 ENDOPLASMIC RETICULUM 38 1631 4.419e-05 0.002462
11 BRUSH BORDER MEMBRANE 6 55 4.637e-05 0.002462

Over-represented Pathway

NumPathwayPathviewOverlapSizeP ValueAdj. P Value
1 Tight_junction_hsa04530 5 170 0.05212 0.9274
2 ErbB_signaling_pathway_hsa04012 3 85 0.08014 0.9274
3 Ferroptosis_hsa04216 2 40 0.08133 0.9274
4 ABC_transporters_hsa02010 2 45 0.0994 0.9274
5 Hedgehog_signaling_pathway_hsa04340 2 47 0.1069 0.9274
6 Phagosome_hsa04145 4 152 0.107 0.9274
7 AMPK_signaling_pathway_hsa04152 3 121 0.1735 1
8 p53_signaling_pathway_hsa04115 2 68 0.1927 1
9 Signaling_pathways_regulating_pluripotency_of_stem_cells_hsa04550 3 139 0.228 1
10 PI3K_Akt_signaling_pathway_hsa04151 6 352 0.2401 1
11 ECM_receptor_interaction_hsa04512 2 82 0.2537 1
12 Peroxisome_hsa04146 2 83 0.2581 1
13 Hippo_signaling_pathway_hsa04390 3 154 0.2756 1
14 Neuroactive_ligand_receptor_interaction_hsa04080 4 278 0.4192 1
15 Regulation_of_actin_cytoskeleton_hsa04810 3 208 0.4485 1
16 MAPK_signaling_pathway_hsa04010 4 295 0.4639 1
17 Cell_adhesion_molecules_.CAMs._hsa04514 2 145 0.5145 1
18 Wnt_signaling_pathway_hsa04310 2 146 0.5182 1
19 Jak_STAT_signaling_pathway_hsa04630 2 162 0.5744 1
20 Necroptosis_hsa04217 2 164 0.5811 1
21 Cytokine_cytokine_receptor_interaction_hsa04060 3 270 0.6232 1
22 Calcium_signaling_pathway_hsa04020 2 182 0.6378 1
23 Focal_adhesion_hsa04510 2 199 0.6856 1

lncRNA-mediated sponge

(Download full result)

Num lncRNA miRNAs           miRNAs count     Gene Sponge regulatory network lncRNA log2FC lncRNA pvalue Gene log2FC Gene pvalue lncRNA-gene Pearson correlation
1

UCA1

 hsa-miR-129-5p;hsa-miR-130b-5p;hsa-miR-132-3p;hsa-miR-148b-5p;hsa-miR-185-5p;hsa-miR-186-5p;hsa-miR-20b-5p;hsa-miR-26a-5p;hsa-miR-29b-2-5p;hsa-miR-3065-5p;hsa-miR-362-5p;hsa-miR-432-5p;hsa-miR-495-3p;hsa-miR-539-5p;hsa-miR-590-3p;hsa-miR-7-1-3p 16 GPRC5A Sponge network 1.481 0.28957 3.955 0.00162 0.622
2

UCA1

 hsa-miR-101-5p;hsa-miR-103a-2-5p;hsa-miR-125a-5p;hsa-miR-126-5p;hsa-miR-129-5p;hsa-miR-154-5p;hsa-miR-186-5p;hsa-miR-339-5p;hsa-miR-501-5p;hsa-miR-539-5p;hsa-miR-590-3p;hsa-miR-590-5p 12 TMPRSS4 Sponge network 1.481 0.28957 5.411 0.00024 0.619
3

DIO3OS

 hsa-miR-103a-2-5p;hsa-miR-125a-5p;hsa-miR-129-5p;hsa-miR-154-5p;hsa-miR-186-5p;hsa-miR-330-5p;hsa-miR-3613-3p;hsa-miR-501-5p;hsa-miR-539-5p;hsa-miR-769-5p 10 TMPRSS4 Sponge network 1.18 0.0997 5.411 0.00024 0.584
4

DIO3OS

 hsa-let-7g-3p;hsa-miR-129-5p;hsa-miR-130b-5p;hsa-miR-132-3p;hsa-miR-148b-3p;hsa-miR-148b-5p;hsa-miR-185-5p;hsa-miR-186-5p;hsa-miR-20b-5p;hsa-miR-29b-2-5p;hsa-miR-301a-3p;hsa-miR-30b-3p;hsa-miR-30c-1-3p;hsa-miR-330-3p;hsa-miR-3607-3p;hsa-miR-532-3p;hsa-miR-539-5p;hsa-miR-589-3p;hsa-miR-93-3p 19 GPRC5A Sponge network 1.18 0.0997 3.955 0.00162 0.573
5

UCA1

 hsa-miR-126-5p;hsa-miR-129-5p;hsa-miR-135a-5p;hsa-miR-299-3p;hsa-miR-374a-5p;hsa-miR-374b-5p;hsa-miR-539-5p;hsa-miR-582-5p;hsa-miR-590-3p;hsa-miR-590-5p;hsa-miR-628-3p 11 EREG Sponge network 1.481 0.28957 4.411 0.00138 0.56
6

PVT1

 hsa-let-7g-3p;hsa-miR-129-5p;hsa-miR-130b-5p;hsa-miR-132-3p;hsa-miR-148b-3p;hsa-miR-148b-5p;hsa-miR-29b-2-5p;hsa-miR-301a-3p;hsa-miR-330-3p;hsa-miR-432-5p;hsa-miR-532-3p;hsa-miR-592 12 GPRC5A Sponge network 0.67 0.32654 3.955 0.00162 0.522
7

EGOT

 hsa-let-7g-3p;hsa-miR-137;hsa-miR-148b-3p;hsa-miR-148b-5p;hsa-miR-185-5p;hsa-miR-186-5p;hsa-miR-29b-2-5p;hsa-miR-301a-3p;hsa-miR-495-3p;hsa-miR-592;hsa-miR-7-1-3p 11 GPRC5A Sponge network -1.196 0.1622 3.955 0.00162 0.451
8

UCA1

 hsa-miR-154-3p;hsa-miR-16-1-3p;hsa-miR-3065-5p;hsa-miR-339-5p;hsa-miR-362-5p;hsa-miR-487a-3p;hsa-miR-500a-5p;hsa-miR-500b-5p;hsa-miR-590-3p;hsa-miR-590-5p;hsa-miR-628-3p;hsa-miR-7-1-3p 12 ABCA13 Sponge network 1.481 0.28957 2.713 0.0092 0.403
9

PVT1

 hsa-miR-1224-5p;hsa-miR-130b-5p;hsa-miR-136-5p;hsa-miR-148a-5p;hsa-miR-148b-3p;hsa-miR-204-5p;hsa-miR-216a-5p;hsa-miR-324-3p;hsa-miR-501-5p;hsa-miR-628-5p;hsa-miR-758-3p 11 DNAH3 Sponge network 0.67 0.32654 3.099 0.00111 0.387
10

EGOT

 hsa-miR-139-5p;hsa-miR-148b-3p;hsa-miR-154-3p;hsa-miR-16-1-3p;hsa-miR-320c;hsa-miR-324-5p;hsa-miR-421;hsa-miR-487a-3p;hsa-miR-491-5p;hsa-miR-7-1-3p 10 ABCA13 Sponge network -1.196 0.1622 2.713 0.0092 0.378
11 H19 hsa-let-7g-3p;hsa-miR-129-5p;hsa-miR-132-3p;hsa-miR-148b-3p;hsa-miR-148b-5p;hsa-miR-29b-2-5p;hsa-miR-301a-3p;hsa-miR-30b-3p;hsa-miR-454-3p;hsa-miR-495-3p;hsa-miR-532-3p;hsa-miR-539-5p;hsa-miR-589-3p;hsa-miR-592 14 GPRC5A Sponge network -0.02 0.98077 3.955 0.00162 0.366
12 HCP5 hsa-miR-129-5p;hsa-miR-132-3p;hsa-miR-148b-3p;hsa-miR-148b-5p;hsa-miR-29b-2-5p;hsa-miR-301a-3p;hsa-miR-30b-3p;hsa-miR-330-3p;hsa-miR-495-3p;hsa-miR-539-5p 10 GPRC5A Sponge network -0.577 0.20814 3.955 0.00162 0.361
13

DIO3OS

 hsa-miR-1224-5p;hsa-miR-130b-5p;hsa-miR-136-5p;hsa-miR-148a-5p;hsa-miR-148b-3p;hsa-miR-188-5p;hsa-miR-204-5p;hsa-miR-324-3p;hsa-miR-377-5p;hsa-miR-501-5p;hsa-miR-539-5p;hsa-miR-628-5p;hsa-miR-98-5p 13 DNAH3 Sponge network 1.18 0.0997 3.099 0.00111 0.361
14

NEAT1

 hsa-miR-1270;hsa-miR-132-5p;hsa-miR-148b-3p;hsa-miR-185-3p;hsa-miR-204-5p;hsa-miR-324-3p;hsa-miR-326;hsa-miR-382-5p;hsa-miR-421;hsa-miR-431-5p;hsa-miR-532-3p;hsa-miR-543;hsa-miR-628-5p;hsa-miR-744-3p 14 ONECUT3 Sponge network -0.3 0.62793 3.758 0.00762 0.36
15 AGAP11 hsa-miR-107;hsa-miR-141-3p;hsa-miR-147b;hsa-miR-148b-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-200a-3p;hsa-miR-30b-3p;hsa-miR-455-3p;hsa-miR-455-5p 10 WDFY4 Sponge network -0.834 0.15213 -2.494 0.0049 0.342
16

DIO3OS

 hsa-miR-106a-5p;hsa-miR-1270;hsa-miR-130b-5p;hsa-miR-132-5p;hsa-miR-148a-3p;hsa-miR-148b-3p;hsa-miR-148b-5p;hsa-miR-185-3p;hsa-miR-204-5p;hsa-miR-20b-5p;hsa-miR-296-5p;hsa-miR-324-3p;hsa-miR-382-5p;hsa-miR-455-3p;hsa-miR-532-3p;hsa-miR-628-5p;hsa-miR-769-3p;hsa-miR-93-3p;hsa-miR-98-5p 19 ONECUT3 Sponge network 1.18 0.0997 3.758 0.00762 0.342
17 CASC2 hsa-miR-126-5p;hsa-miR-130a-3p;hsa-miR-142-5p;hsa-miR-146a-5p;hsa-miR-146b-5p;hsa-miR-21-5p;hsa-miR-22-5p;hsa-miR-224-3p;hsa-miR-2355-3p;hsa-miR-24-2-5p;hsa-miR-26a-2-3p;hsa-miR-30a-3p 12 RAB3B Sponge network 0.854 0.028 2.286 0.00176 0.331
18

PVT1

 hsa-miR-130b-5p;hsa-miR-132-5p;hsa-miR-148a-3p;hsa-miR-148b-3p;hsa-miR-148b-5p;hsa-miR-204-5p;hsa-miR-324-3p;hsa-miR-382-5p;hsa-miR-431-5p;hsa-miR-532-3p;hsa-miR-543;hsa-miR-628-5p;hsa-miR-769-3p 13 ONECUT3 Sponge network 0.67 0.32654 3.758 0.00762 0.302
19

KCNQ1OT1

 hsa-miR-126-5p;hsa-miR-154-5p;hsa-miR-186-5p;hsa-miR-330-5p;hsa-miR-369-3p;hsa-miR-376a-5p;hsa-miR-485-3p;hsa-miR-496;hsa-miR-539-5p;hsa-miR-590-3p;hsa-miR-590-5p;hsa-miR-769-5p 12 TMPRSS4 Sponge network 0.495 0.30013 5.411 0.00024 0.299
20

UCA1

 hsa-miR-1224-5p;hsa-miR-130b-5p;hsa-miR-136-5p;hsa-miR-148a-5p;hsa-miR-204-5p;hsa-miR-324-3p;hsa-miR-377-5p;hsa-miR-495-3p;hsa-miR-501-5p;hsa-miR-539-5p;hsa-miR-7-1-3p 11 DNAH3 Sponge network 1.481 0.28957 3.099 0.00111 0.29
21

UCA1

 hsa-miR-130b-5p;hsa-miR-132-5p;hsa-miR-148b-5p;hsa-miR-204-5p;hsa-miR-20b-5p;hsa-miR-296-5p;hsa-miR-324-3p;hsa-miR-382-5p;hsa-miR-590-3p;hsa-miR-744-3p 10 ONECUT3 Sponge network 1.481 0.28957 3.758 0.00762 0.274
22

UCA1

 hsa-miR-101-5p;hsa-miR-126-5p;hsa-miR-186-5p;hsa-miR-204-5p;hsa-miR-3065-5p;hsa-miR-323a-3p;hsa-miR-340-5p;hsa-miR-374a-5p;hsa-miR-374b-5p;hsa-miR-409-3p;hsa-miR-495-3p;hsa-miR-7-1-3p 12 SLC7A11 Sponge network 1.481 0.28957 2.313 0.00139 0.265

Quest ID: 3af56ee2a293d5124c49c61d41b84d8f