This regulatory network was inferred from the input dataset. The miRNAs and mRNAs are
presented as round and rectangle nodes respectively. The numerical value popped up upon mouse over the gene node is the log2 transformed fold-change of the gene expression between the two groups. All of the nodes are clickable, and the detailed information of the miRNAs/mRNAs and related cancer pathway will be displayed in another window. The edges between nodes are supported by both interactions (predicted or experimentally verified) and correlations learnt from cancer dataset. The numerical value popped up upon mouse over the edge is the correlation beat value (effect size) between the two nodes. The experimental evidences of the edges reported in previous cancer studies are highlighted by red/orange color. All of these information can be accessed by the "mouse-over" action. This network shows a full map of the miRNA-mRNA regulation of the input gene list(s), and the hub miRNAs (with the high network degree/betweenness centrality) would be the potential cancer drivers or tumor suppressors. The full result table can be accessed in the "Regulations" tab.
"miRNACancerMAP" is also a network visualization tool for users to draw their regulatory network by personal customization. Users can set the complexity of the network by limiting the number of nodes or edges. And the color of the nodes can be defined by different categories of the mRNAs and miRNAs, such as Gene-Ontology, pathway, and expression status. Users can also select to use network degree or network betweenness centrality to define the node size. And edges can be black or colored by the correlation. Purple edge means negative correlation (mostly found between miRNA and mRNA), and blue edge means positive correlation (found in PPI or miRNA-miRNA sponge effect). We can also add the protein-protein interactions (PPI) into the network. This result will show the cluster of genes regulated by some specific miRNAs. Additionally, miRNA-miRNA edges can be added by the "miRNA sponge" button, presenting some clusters of miRNAs that have the interactions via sponge effect.
Num | microRNA | Gene | miRNA log2FC | miRNA pvalue | Gene log2FC | Gene pvalue | Interaction | Correlation beta | Correlation P-value | PMID | Reported in cancer studies |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | hsa-miR-155-5p | APAF1 | 2.81 | 7.0E-5 | 0.35 | 0.33131 | miRNAWalker2 validate | -0.11 | 0.0002 | 22996741; 26877850 | MiR 155 inhibits the sensitivity of lung cancer cells to cisplatin via negative regulation of Apaf 1 expression; The objective of this study is to verify the hypothesis based on the results of bioinformatics analysis that miR-155 modulates cellular apoptosis and DNA damage through the regulation of Apaf-1 and is thus involved in the development and progression of lung cancer; First we measured the expression of miR-155 and the Apaf-1 protein in lung cancer tissues; The results showed that expression of miR-155 was significantly higher in lung cancer tissues than in paracancerous and normal tissues; whereas Apaf-1 expression was lower in the lung cancerous tissues; The results showed that relative to controls the silencing of miR-155 resulted in elevated expression of the Apaf-1 protein whereas Apaf-1 mRNA levels remained unchanged; Both the silencing of miR-155 and the overexpression Apaf-1 greatly increased the sensitivity of A549 cells to cisplatin treatment as evidenced by elevated rates of apoptosis and DNA damage; Furthermore dual-transfection of A549 cells with miR-155 siRNA and Apaf-1 siRNA resulted in the attenuation of apoptosis and DNA damage;Also increase in the transcript level of APAF-1 and CASP-9 after downregulation of miR-21 and miR-155 might indicate that these genes were targeted by aforementioned miRNAs in T47D cells |
2 | hsa-miR-23a-3p | APAF1 | 0.93 | 0.01273 | 0.35 | 0.33131 | miRNATAP | -0.25 | 1.0E-5 | 24992592; 24249161 | Luciferase assay was performed to verify a putative target site of miR-23a in the 3'-UTR of apoptosis protease activating factor 1 APAF1 mRNA; The expression levels of miR-23a and APAF1 in CRC cell lines SW480 and SW620 and clinical samples were assessed using reverse transcription-quantitative real-time PCR RT-qPCR and Western blot; Moreover miR-23a up-regulation was coupled with APAF1 down-regulation in CRC tissue samples;We found that the expression of miR-23a was increased and the level of apoptosis-activating factor-1 APAF-1 was decreased in 5-FU-treated colon cancer cells compared to untreated cells; APAF-1 as a target gene of miR-23a was identified and miR-23a antisense-induced increase in the activation of caspase-9 was observed |
3 | hsa-miR-23b-3p | APAF1 | -0.58 | 0.19048 | 0.35 | 0.33131 | miRNATAP | -0.16 | 0.00048 | NA | |
4 | hsa-miR-27a-3p | APAF1 | 1.76 | 0.00022 | 0.35 | 0.33131 | miRNATAP | -0.18 | 3.0E-5 | NA | |
5 | hsa-miR-27b-3p | APAF1 | -0.09 | 0.85847 | 0.35 | 0.33131 | miRNATAP | -0.16 | 6.0E-5 | NA | |
6 | hsa-miR-590-3p | APAF1 | 2.35 | 0 | 0.35 | 0.33131 | PITA; miRanda; mirMAP; miRNATAP | -0.12 | 0.0034 | NA | |
7 | hsa-miR-708-3p | APAF1 | 0.78 | 0.29065 | 0.35 | 0.33131 | mirMAP | -0.12 | 2.0E-5 | NA | |
8 | hsa-miR-203a-3p | ATM | 6.35 | 0 | -0.66 | 0.11688 | MirTarget | -0.11 | 0 | 24145123; 27542403 | miR 203 induces oxaliplatin resistance in colorectal cancer cells by negatively regulating ATM kinase; In silico analysis identified ataxia telangiectasia mutated ATM a primary mediator of the DNA damage response as a potential target of miR-203; Using TCGA database we identified a significant reverse correlation of miR-203 and ATM expression in CRC tissues; We validated ATM as a bona fide target of miR-203 in CRC cells; Mutation of the putative miR-203 binding site in the 3' untranslated region 3'UTR of the ATM mRNA abolished the inhibitory effect of miR-203 on ATM;MiR 203 inhibits tumor invasion and metastasis in gastric cancer by ATM; Our results showed that miR-203 was significantly downregulated in gastric cancer tissues and cells while ataxia telangiectasia mutated kinase ATM was upregulated in gastric cancer tissues and cells and was directly regulated by miR-203; ATM knockdown phenocopied the effect of miR-203 overexpression |
9 | hsa-miR-27a-5p | ATM | 1.45 | 0.03942 | -0.66 | 0.11688 | MirTarget | -0.12 | 0.00046 | NA | |
10 | hsa-miR-30e-3p | ATM | -0.04 | 0.93258 | -0.66 | 0.11688 | mirMAP | -0.16 | 0.0051 | NA | |
11 | hsa-miR-339-5p | ATM | 1.23 | 0.03075 | -0.66 | 0.11688 | miRanda | -0.16 | 0.00017 | NA | |
12 | hsa-miR-590-5p | ATM | 1.51 | 0.00239 | -0.66 | 0.11688 | mirMAP | -0.13 | 0.00485 | NA | |
13 | hsa-miR-29a-5p | ATR | 0.07 | 0.88413 | 1.12 | 0.00118 | mirMAP | -0.13 | 0.00077 | NA | |
14 | hsa-miR-30a-5p | ATR | -0.77 | 0.32049 | 1.12 | 0.00118 | mirMAP | -0.11 | 1.0E-5 | NA | |
15 | hsa-miR-139-5p | BBC3 | -2.09 | 0.00038 | 0.48 | 0.3579 | miRNATAP | -0.16 | 0.00143 | NA | |
16 | hsa-let-7a-5p | CCND1 | 0.15 | 0.64531 | 0.15 | 0.87753 | TargetScan; miRNATAP | -0.54 | 0.00245 | NA | |
17 | hsa-miR-106a-5p | CCND1 | 3.99 | 0 | 0.15 | 0.87753 | MirTarget; miRNATAP | -0.43 | 0 | NA | |
18 | hsa-miR-15a-5p | CCND1 | 2.05 | 0 | 0.15 | 0.87753 | miRNAWalker2 validate; miRTarBase; MirTarget; miRNATAP | -0.35 | 0.00776 | 22922827 | CCND1 has been found to be a target of miR-15a and miR-16-1 through analysis of complementary sequences between microRNAs and CCND1 mRNA; Moreover the transcription of CCND1 is suppressed by miR-15a and miR-16-1 via direct binding to the CCND1 3'-untranslated region 3'-UTR |
19 | hsa-miR-15b-5p | CCND1 | 3.32 | 0 | 0.15 | 0.87753 | miRNAWalker2 validate; miRTarBase; MirTarget; miRNATAP | -0.42 | 0.00029 | NA | |
20 | hsa-miR-20b-5p | CCND1 | 4.57 | 5.0E-5 | 0.15 | 0.87753 | MirTarget; miRNATAP | -0.31 | 0 | NA | |
21 | hsa-miR-34a-5p | CCND1 | 0.83 | 0.04775 | 0.15 | 0.87753 | miRNAWalker2 validate; miRTarBase; miRNATAP | -0.42 | 0.00174 | 25792709; 21399894 | This inhibition of proliferation was associated with a decrease in cyclin D1 levels orchestrated principally by HNF-4α a target of miR-34a considered to act as a tumour suppressor in the liver;Quantitative PCR and western analysis confirmed decreased expression of two genes BCL-2 and CCND1 in docetaxel-resistant cells which are both targeted by miR-34a |
22 | hsa-miR-497-5p | CCND1 | -1.44 | 0.02251 | 0.15 | 0.87753 | MirTarget; miRNATAP | -0.25 | 0.00498 | 21350001 | Raf-1 and Ccnd1 were identified as novel direct targets of miR-195 and miR-497 miR-195/497 expression levels in clinical specimens were found to be correlated inversely with malignancy of breast cancer |
23 | hsa-miR-106a-5p | CCND2 | 3.99 | 0 | -2.81 | 0.0014 | miRNATAP | -0.44 | 0 | NA | |
24 | hsa-miR-106b-5p | CCND2 | 2.81 | 0 | -2.81 | 0.0014 | miRNAWalker2 validate; miRTarBase; miRNATAP | -0.31 | 0.00374 | NA | |
25 | hsa-miR-10a-3p | CCND2 | 0.97 | 0.31667 | -2.81 | 0.0014 | mirMAP | -0.2 | 0.00011 | NA | |
26 | hsa-miR-130b-5p | CCND2 | 3.74 | 0 | -2.81 | 0.0014 | mirMAP | -0.46 | 0 | NA | |
27 | hsa-miR-141-3p | CCND2 | 7.3 | 0 | -2.81 | 0.0014 | MirTarget; TargetScan | -0.24 | 0.00021 | NA | |
28 | hsa-miR-15b-5p | CCND2 | 3.32 | 0 | -2.81 | 0.0014 | miRNATAP | -0.53 | 0 | NA | |
29 | hsa-miR-16-2-3p | CCND2 | 3.8 | 0 | -2.81 | 0.0014 | mirMAP | -0.29 | 0.00207 | NA | |
30 | hsa-miR-182-5p | CCND2 | 5.87 | 0 | -2.81 | 0.0014 | miRNAWalker2 validate; miRTarBase; miRNATAP | -0.28 | 2.0E-5 | NA | |
31 | hsa-miR-183-5p | CCND2 | 6.62 | 0 | -2.81 | 0.0014 | miRNATAP | -0.29 | 0 | NA | |
32 | hsa-miR-191-5p | CCND2 | 1.59 | 0.00074 | -2.81 | 0.0014 | MirTarget | -0.32 | 0.00314 | NA | |
33 | hsa-miR-200a-3p | CCND2 | 6.34 | 0 | -2.81 | 0.0014 | MirTarget | -0.41 | 0 | NA | |
34 | hsa-miR-20b-5p | CCND2 | 4.57 | 5.0E-5 | -2.81 | 0.0014 | miRNATAP | -0.3 | 0 | NA | |
35 | hsa-miR-224-3p | CCND2 | 2.85 | 0.00018 | -2.81 | 0.0014 | mirMAP | -0.22 | 0.00101 | NA | |
36 | hsa-miR-28-5p | CCND2 | -0.82 | 0.02212 | -2.81 | 0.0014 | miRanda | -0.43 | 0.00273 | NA | |
37 | hsa-miR-3065-3p | CCND2 | 1.89 | 0.03082 | -2.81 | 0.0014 | MirTarget; miRNATAP | -0.21 | 0.00027 | NA | |
38 | hsa-miR-3065-5p | CCND2 | 2.14 | 0.06094 | -2.81 | 0.0014 | mirMAP | -0.2 | 0.00026 | NA | |
39 | hsa-miR-30d-3p | CCND2 | -0.07 | 0.85742 | -2.81 | 0.0014 | mirMAP | -0.55 | 1.0E-5 | NA | |
40 | hsa-miR-324-3p | CCND2 | 1.51 | 0.00384 | -2.81 | 0.0014 | miRNAWalker2 validate | -0.44 | 0 | NA | |
41 | hsa-miR-33a-3p | CCND2 | 2.06 | 0.00156 | -2.81 | 0.0014 | MirTarget | -0.27 | 0.00041 | NA | |
42 | hsa-miR-378a-3p | CCND2 | 1.47 | 0.04667 | -2.81 | 0.0014 | miRNAWalker2 validate | -0.19 | 0.00601 | NA | |
43 | hsa-miR-429 | CCND2 | 6.4 | 0 | -2.81 | 0.0014 | miRNATAP | -0.46 | 0 | NA | |
44 | hsa-miR-497-5p | CCND2 | -1.44 | 0.02251 | -2.81 | 0.0014 | MirTarget; miRNATAP | -0.27 | 0.00058 | NA | |
45 | hsa-miR-550a-5p | CCND2 | 1.22 | 0.06138 | -2.81 | 0.0014 | MirTarget | -0.22 | 0.00363 | NA | |
46 | hsa-miR-660-5p | CCND2 | -0.07 | 0.88525 | -2.81 | 0.0014 | mirMAP | -0.29 | 0.00793 | NA | |
47 | hsa-miR-9-3p | CCND2 | 1.69 | 0.12517 | -2.81 | 0.0014 | MirTarget; mirMAP; miRNATAP | -0.14 | 0.00185 | NA | |
48 | hsa-miR-93-5p | CCND2 | 2.66 | 0 | -2.81 | 0.0014 | miRNATAP | -0.48 | 0 | NA | |
49 | hsa-miR-96-5p | CCND2 | 5.63 | 0 | -2.81 | 0.0014 | TargetScan; miRNATAP | -0.24 | 0.0003 | NA | |
50 | hsa-miR-27b-3p | CCND3 | -0.09 | 0.85847 | -0.54 | 0.12437 | miRNAWalker2 validate | -0.14 | 0.00019 | NA | |
51 | hsa-miR-429 | CCND3 | 6.4 | 0 | -0.54 | 0.12437 | miRNATAP | -0.11 | 1.0E-5 | NA | |
52 | hsa-miR-96-5p | CCND3 | 5.63 | 0 | -0.54 | 0.12437 | TargetScan | -0.12 | 1.0E-5 | NA | |
53 | hsa-miR-125b-5p | CCNE1 | -2.01 | 0.00516 | 3.91 | 0 | miRNAWalker2 validate | -0.13 | 0.00065 | NA | |
54 | hsa-miR-195-5p | CCNE1 | -1.59 | 0.01691 | 3.91 | 0 | miRNAWalker2 validate; MirTarget; miRNATAP | -0.12 | 0.0047 | 24402230 | Furthermore through qPCR and western blot assays we showed that overexpression of miR-195-5p reduced CCNE1 mRNA and protein levels respectively |
55 | hsa-miR-26a-5p | CCNE1 | -0.35 | 0.36204 | 3.91 | 0 | miRNAWalker2 validate; miRTarBase; miRNATAP | -0.18 | 0.00988 | 22094936 | Cell cycle regulation and CCNE1 and CDC2 were the only significant overlapping pathway and genes differentially expressed between tumors with high and low levels of miR-26a and EZH2 respectively; Low mRNA levels of EZH2 CCNE1 and CDC2 and high levels of miR-26a are associated with favorable outcome on tamoxifen |
56 | hsa-miR-497-5p | CCNE1 | -1.44 | 0.02251 | 3.91 | 0 | MirTarget; miRNATAP | -0.13 | 0.00315 | 24909281; 24112607; 25909221 | miR 497 suppresses proliferation of human cervical carcinoma HeLa cells by targeting cyclin E1; Furthermore the target effect of miR-497 on the CCNE1 was identified by dual-luciferase reporter assay system qRT-PCR and Western blotting; Over-expressed miR-497 in HeLa cells could suppress cell proliferation by targeting CCNE1;Western blot assays confirmed that overexpression of miR-497 reduced cyclin E1 protein levels; Inhibited cellular growth suppressed cellular migration and invasion and G1 cell cycle arrest were observed upon overexpression of miR-497 in cells possibly by targeting cyclin E1;The effect of simultaneous overexpression of miR-497 and miR-34a on the inhibition of cell proliferation colony formation and tumor growth and the downregulation of cyclin E1 was stronger than the effect of each miRNA alone; The synergistic actions of miR-497 and miR-34a partly correlated with cyclin E1 levels; These results indicate cyclin E1 is downregulated by both miR-497 and miR-34a which synergistically retard the growth of human lung cancer cells |
57 | hsa-miR-28-3p | CCNE2 | -0.99 | 0.01882 | 4.78 | 0 | PITA; miRNATAP | -0.21 | 0.00739 | NA | |
58 | hsa-miR-30a-5p | CCNE2 | -0.77 | 0.32049 | 4.78 | 0 | miRNATAP | -0.23 | 0 | NA | |
59 | hsa-miR-142-3p | CCNG1 | 4.35 | 0 | -1.1 | 0.00346 | miRanda | -0.1 | 0.00059 | NA | |
60 | hsa-miR-142-5p | CCNG1 | 3.96 | 0 | -1.1 | 0.00346 | mirMAP | -0.13 | 1.0E-5 | NA | |
61 | hsa-miR-21-5p | CCNG1 | 2.65 | 0 | -1.1 | 0.00346 | miRNAWalker2 validate | -0.22 | 0.00035 | NA | |
62 | hsa-miR-23a-3p | CCNG1 | 0.93 | 0.01273 | -1.1 | 0.00346 | MirTarget; miRNATAP | -0.2 | 0.00054 | NA | |
63 | hsa-miR-24-3p | CCNG1 | 1.56 | 0.00052 | -1.1 | 0.00346 | miRNAWalker2 validate | -0.17 | 0.00038 | NA | |
64 | hsa-miR-27a-3p | CCNG1 | 1.76 | 0.00022 | -1.1 | 0.00346 | MirTarget; miRNATAP | -0.25 | 0 | NA | |
65 | hsa-miR-27b-3p | CCNG1 | -0.09 | 0.85847 | -1.1 | 0.00346 | MirTarget; miRNATAP | -0.11 | 0.00875 | 26623719 | Moreover miR-27b directly targets the 3' untranslated regions 3'-UTRs of CCNG1 a well-known negative regulator of P53 stability; Interestingly miR-27b up-regulation leads to increased miR-508-5p expression and this phenomenon is mediated by CCNG1 and P53 |
66 | hsa-miR-16-2-3p | CCNG2 | 3.8 | 0 | -0.75 | 0.10471 | mirMAP | -0.13 | 0.00819 | NA | |
67 | hsa-miR-664a-3p | CCNG2 | 0.25 | 0.56171 | -0.75 | 0.10471 | MirTarget; mirMAP | -0.26 | 2.0E-5 | NA | |
68 | hsa-miR-125a-3p | CD82 | -0.07 | 0.92074 | 2.27 | 0.00065 | miRanda | -0.15 | 0.00239 | NA | |
69 | hsa-miR-491-5p | CD82 | 0.57 | 0.31331 | 2.27 | 0.00065 | miRanda | -0.25 | 0.00028 | NA | |
70 | hsa-miR-140-5p | CDK2 | -0.63 | 0.12667 | 1.42 | 2.0E-5 | miRanda | -0.12 | 0.00814 | NA | |
71 | hsa-let-7a-5p | CDK6 | 0.15 | 0.64531 | 0.5 | 0.55124 | miRNAWalker2 validate; miRTarBase; TargetScan | -0.65 | 2.0E-5 | NA | |
72 | hsa-let-7b-5p | CDK6 | -0.19 | 0.65188 | 0.5 | 0.55124 | miRNAWalker2 validate; miRTarBase | -0.47 | 5.0E-5 | NA | |
73 | hsa-miR-101-3p | CDK6 | -1.12 | 0.02009 | 0.5 | 0.55124 | mirMAP | -0.42 | 2.0E-5 | NA | |
74 | hsa-miR-106a-5p | CDK6 | 3.99 | 0 | 0.5 | 0.55124 | mirMAP | -0.39 | 0 | NA | |
75 | hsa-miR-141-3p | CDK6 | 7.3 | 0 | 0.5 | 0.55124 | TargetScan; miRNATAP | -0.2 | 0.0009 | NA | |
76 | hsa-miR-148b-3p | CDK6 | 1.76 | 0 | 0.5 | 0.55124 | mirMAP | -0.47 | 0.00118 | NA | |
77 | hsa-miR-200a-3p | CDK6 | 6.34 | 0 | 0.5 | 0.55124 | miRNATAP | -0.35 | 0 | 24009066 | microRNA 200a is an independent prognostic factor of hepatocellular carcinoma and induces cell cycle arrest by targeting CDK6 |
78 | hsa-miR-200b-3p | CDK6 | 5.56 | 0 | 0.5 | 0.55124 | mirMAP | -0.39 | 0 | NA | |
79 | hsa-miR-20b-5p | CDK6 | 4.57 | 5.0E-5 | 0.5 | 0.55124 | mirMAP | -0.28 | 0 | 26166554 | The transfection of miR-20b into EJ cells induced G1 phase cell cycle arrest via the decreased expression of cyclin D1 CDK2 and CDK6 without affecting another G1 phase cell cycle regulator cyclin E |
80 | hsa-miR-30a-5p | CDK6 | -0.77 | 0.32049 | 0.5 | 0.55124 | mirMAP | -0.17 | 0.00517 | NA | |
81 | hsa-miR-30d-5p | CDK6 | 0.3 | 0.38019 | 0.5 | 0.55124 | mirMAP | -0.5 | 0.00043 | NA | |
82 | hsa-miR-30e-5p | CDK6 | 0.78 | 0.03467 | 0.5 | 0.55124 | mirMAP | -0.54 | 4.0E-5 | NA | |
83 | hsa-miR-34a-5p | CDK6 | 0.83 | 0.04775 | 0.5 | 0.55124 | miRNAWalker2 validate; miRTarBase; miRNATAP | -0.36 | 0.00175 | 21702042; 26104764 | Molecular analyses identified Cdk6 and sirtuin SIRT-1 as being targeted by miR-34a in MI-TCC cells however inhibition of Cdk6 and SIRT-1 was not as effective as pre-miR-34a in mediating chemosensitization;The expression of microRNA 34a is inversely correlated with c MET and CDK6 and has a prognostic significance in lung adenocarcinoma patients; We found significant inverse correlations between miR-34a and c-MET R = -0.316 P = 0.028 and CDK6 expression R = -0.4582 P = 0.004 |
84 | hsa-miR-362-5p | CDK6 | -1.22 | 0.04527 | 0.5 | 0.55124 | mirMAP | -0.29 | 0.00026 | NA | |
85 | hsa-miR-429 | CDK6 | 6.4 | 0 | 0.5 | 0.55124 | mirMAP; miRNATAP | -0.25 | 4.0E-5 | NA | |
86 | hsa-miR-497-5p | CDK6 | -1.44 | 0.02251 | 0.5 | 0.55124 | miRNATAP | -0.31 | 3.0E-5 | NA | |
87 | hsa-miR-502-3p | CDK6 | -0.1 | 0.80889 | 0.5 | 0.55124 | PITA; miRNATAP | -0.42 | 0.00027 | NA | |
88 | hsa-miR-592 | CDK6 | 2.8 | 0.02935 | 0.5 | 0.55124 | mirMAP | -0.23 | 0 | NA | |
89 | hsa-miR-660-5p | CDK6 | -0.07 | 0.88525 | 0.5 | 0.55124 | mirMAP | -0.37 | 0.00036 | NA | |
90 | hsa-let-7e-5p | CDKN1A | -0.11 | 0.81474 | 0.58 | 0.35758 | MirTarget | -0.27 | 0.00026 | NA | |
91 | hsa-let-7g-5p | CDKN1A | 0.86 | 0.00648 | 0.58 | 0.35758 | MirTarget | -0.32 | 0.00586 | NA | |
92 | hsa-miR-125a-5p | CDKN1A | -1.32 | 0.00714 | 0.58 | 0.35758 | miRNAWalker2 validate; miRTarBase | -0.35 | 0 | NA | |
93 | hsa-miR-28-5p | CDKN1A | -0.82 | 0.02212 | 0.58 | 0.35758 | miRNAWalker2 validate; miRTarBase; MirTarget; miRanda; miRNATAP | -0.55 | 0 | NA | |
94 | hsa-miR-30b-3p | CDKN1A | 0.17 | 0.76608 | 0.58 | 0.35758 | MirTarget | -0.16 | 0.00864 | NA | |
95 | hsa-miR-335-5p | CDKN1A | 0.17 | 0.8039 | 0.58 | 0.35758 | miRNAWalker2 validate | -0.25 | 0 | NA | |
96 | hsa-miR-345-5p | CDKN1A | 2.77 | 4.0E-5 | 0.58 | 0.35758 | miRNAWalker2 validate; miRTarBase; MirTarget | -0.23 | 1.0E-5 | NA | |
97 | hsa-miR-423-3p | CDKN1A | 1.71 | 2.0E-5 | 0.58 | 0.35758 | miRNAWalker2 validate; miRTarBase | -0.27 | 0.00253 | NA | |
98 | hsa-miR-505-5p | CDKN1A | -0.55 | 0.33141 | 0.58 | 0.35758 | miRNAWalker2 validate; MirTarget | -0.18 | 0.00519 | NA | |
99 | hsa-miR-616-5p | CDKN1A | 2.48 | 0.00318 | 0.58 | 0.35758 | mirMAP | -0.14 | 0.0061 | NA | |
100 | hsa-miR-96-5p | CDKN1A | 5.63 | 0 | 0.58 | 0.35758 | miRNAWalker2 validate; miRTarBase | -0.17 | 0.00034 | 26582573 | Upregulation of microRNA 96 and its oncogenic functions by targeting CDKN1A in bladder cancer; Bioinformatics prediction combined with luciferase reporter assay were used to verify whether the cyclin-dependent kinase inhibitor CDKN1A was a potential target gene of miR-96; According to the data of miRTarBase CDKN1A might be a candidate target gene of miR-96; In addition luciferase reporter and Western blot assays respectively demonstrated that miR-96 could bind to the putative seed region in CDKN1A mRNA 3'UTR and significantly reduce the expression level of CDKN1A protein; Moreover we found that the inhibition of miR-96 expression remarkably decreased cell proliferation and promoted cell apoptosis of BC cell lines which was consistent with the findings observed following the introduction of CDKN1A cDNA without 3'UTR restored miR-96; Upregulation of miR-96 may contribute to aggressive malignancy partly through suppressing CDKN1A protein expression in BC cells |
101 | hsa-miR-10b-5p | CDKN2A | -3.08 | 0 | 7.38 | 0 | miRNAWalker2 validate; miRTarBase | -0.36 | 0.00054 | NA | |
102 | hsa-miR-125a-5p | CDKN2A | -1.32 | 0.00714 | 7.38 | 0 | miRanda | -0.39 | 0.00048 | NA | |
103 | hsa-miR-106a-5p | FAS | 3.99 | 0 | -0.34 | 0.58934 | miRNAWalker2 validate; miRTarBase | -0.14 | 0.00128 | 22431000; 27142596 | miR 106a is frequently upregulated in gastric cancer and inhibits the extrinsic apoptotic pathway by targeting FAS; Bioinformatic analysis combining with validation experiments identified FAS as a direct target of miR-106a; Moreover a significant inverse correlation was found between miR-106a and FAS expression not only in gastric cancer cell lines but also in gastric cancer specimens; Taken together these findings suggest that ectopicly overexpressed miR-106a may play an oncogenic role in gastric carcinogenesis and impair extrinsic apoptotic pathway through targeting FAS;Functional experiment ascertained that miR-106a interacted with FAS and mediated caspase3 pathway |
104 | hsa-miR-361-5p | FAS | 0.01 | 0.9852 | -0.34 | 0.58934 | miRanda | -0.33 | 0.00172 | NA | |
105 | hsa-miR-590-5p | FAS | 1.51 | 0.00239 | -0.34 | 0.58934 | miRanda | -0.2 | 0.00636 | NA | |
106 | hsa-miR-129-5p | GADD45A | -2.67 | 0.00696 | -0.57 | 0.35686 | miRanda | -0.1 | 0.00449 | NA | |
107 | hsa-miR-130b-3p | GADD45A | 3.92 | 0 | -0.57 | 0.35686 | MirTarget; miRNATAP | -0.17 | 0.00324 | NA | |
108 | hsa-miR-146b-5p | GADD45A | 1.88 | 0.00074 | -0.57 | 0.35686 | miRanda | -0.19 | 0.00233 | NA | |
109 | hsa-miR-148b-3p | GADD45A | 1.76 | 0 | -0.57 | 0.35686 | MirTarget | -0.53 | 0 | NA | |
110 | hsa-miR-301a-3p | GADD45A | 1.99 | 0.00081 | -0.57 | 0.35686 | MirTarget; miRNATAP | -0.19 | 0.00099 | NA | |
111 | hsa-miR-362-5p | GADD45A | -1.22 | 0.04527 | -0.57 | 0.35686 | MirTarget; PITA; miRNATAP | -0.17 | 0.00222 | NA | |
112 | hsa-miR-375 | GADD45A | 3.38 | 0.04499 | -0.57 | 0.35686 | miRanda | -0.1 | 0 | NA | |
113 | hsa-miR-454-3p | GADD45A | 1.4 | 0.00366 | -0.57 | 0.35686 | MirTarget; miRNATAP | -0.31 | 2.0E-5 | NA | |
114 | hsa-miR-500a-5p | GADD45A | 0.02 | 0.97396 | -0.57 | 0.35686 | MirTarget; miRNATAP | -0.19 | 0.00426 | NA | |
115 | hsa-miR-500b-5p | GADD45A | 0.02 | 0.9745 | -0.57 | 0.35686 | MirTarget | -0.19 | 0.0043 | NA | |
116 | hsa-miR-324-3p | GADD45B | 1.51 | 0.00384 | -1.88 | 0.00169 | MirTarget; miRNATAP | -0.17 | 0.00883 | NA | |
117 | hsa-miR-1976 | GADD45G | 3.27 | 0 | -3.78 | 1.0E-5 | MirTarget | -0.34 | 0.0007 | NA | |
118 | hsa-miR-139-5p | GTSE1 | -2.09 | 0.00038 | 6.13 | 0 | miRanda | -0.15 | 0.0074 | NA | |
119 | hsa-let-7f-1-3p | IGF1 | 1.62 | 0.00069 | -4.48 | 0.00149 | mirMAP | -0.92 | 0 | NA | |
120 | hsa-miR-103a-2-5p | IGF1 | 2.77 | 0.0003 | -4.48 | 0.00149 | mirMAP | -0.61 | 0 | NA | |
121 | hsa-miR-130b-3p | IGF1 | 3.92 | 0 | -4.48 | 0.00149 | MirTarget | -0.48 | 0.00036 | NA | |
122 | hsa-miR-15b-3p | IGF1 | 3.58 | 0 | -4.48 | 0.00149 | mirMAP | -0.73 | 0 | NA | |
123 | hsa-miR-16-1-3p | IGF1 | 2.83 | 0 | -4.48 | 0.00149 | mirMAP | -0.81 | 0 | NA | |
124 | hsa-miR-19a-3p | IGF1 | 2.17 | 0.00122 | -4.48 | 0.00149 | MirTarget | -0.58 | 0 | NA | |
125 | hsa-miR-19b-1-5p | IGF1 | 1.51 | 0.00147 | -4.48 | 0.00149 | mirMAP | -1.02 | 0 | NA | |
126 | hsa-miR-19b-3p | IGF1 | 1.68 | 0.00086 | -4.48 | 0.00149 | MirTarget | -0.83 | 0 | NA | |
127 | hsa-miR-20a-3p | IGF1 | 1.99 | 0.00062 | -4.48 | 0.00149 | mirMAP | -0.77 | 0 | NA | |
128 | hsa-miR-27a-3p | IGF1 | 1.76 | 0.00022 | -4.48 | 0.00149 | miRNAWalker2 validate; miRTarBase | -1.1 | 0 | NA | |
129 | hsa-miR-301a-3p | IGF1 | 1.99 | 0.00081 | -4.48 | 0.00149 | MirTarget | -0.46 | 0.00055 | NA | |
130 | hsa-miR-32-3p | IGF1 | 2.2 | 0.03928 | -4.48 | 0.00149 | mirMAP | -0.55 | 3.0E-5 | NA | |
131 | hsa-miR-33a-3p | IGF1 | 2.06 | 0.00156 | -4.48 | 0.00149 | MirTarget | -0.4 | 0.00118 | NA | |
132 | hsa-miR-452-5p | IGF1 | 2.45 | 0.00115 | -4.48 | 0.00149 | MirTarget; mirMAP | -0.29 | 0.00626 | NA | |
133 | hsa-miR-486-5p | IGF1 | 1.11 | 0.30929 | -4.48 | 0.00149 | PITA; miRNATAP | -0.35 | 0 | NA | |
134 | hsa-miR-576-5p | IGF1 | 1.3 | 0.00649 | -4.48 | 0.00149 | PITA; mirMAP; miRNATAP | -0.69 | 4.0E-5 | NA | |
135 | hsa-miR-629-5p | IGF1 | 1.57 | 0.01157 | -4.48 | 0.00149 | mirMAP | -0.43 | 0.0009 | NA | |
136 | hsa-miR-940 | IGF1 | 3.78 | 5.0E-5 | -4.48 | 0.00149 | MirTarget; PITA; miRNATAP | -0.34 | 0.00113 | NA | |
137 | hsa-miR-19a-3p | IGFBP3 | 2.17 | 0.00122 | -2.13 | 0.03278 | MirTarget; miRNATAP | -0.28 | 0.00071 | NA | |
138 | hsa-miR-19b-3p | IGFBP3 | 1.68 | 0.00086 | -2.13 | 0.03278 | MirTarget; miRNATAP | -0.34 | 0.00224 | NA | |
139 | hsa-miR-340-5p | IGFBP3 | 1.41 | 0.00959 | -2.13 | 0.03278 | MirTarget | -0.4 | 0.0001 | NA | |
140 | hsa-miR-140-5p | MDM2 | -0.63 | 0.12667 | 1.1 | 0.00278 | miRanda | -0.13 | 0.00854 | NA | |
141 | hsa-miR-26b-5p | MDM2 | 0.31 | 0.46163 | 1.1 | 0.00278 | miRNAWalker2 validate | -0.17 | 0.00068 | NA | |
142 | hsa-miR-374b-5p | MDM2 | -0.11 | 0.76489 | 1.1 | 0.00278 | mirMAP | -0.2 | 0.00025 | NA | |
143 | hsa-miR-450a-5p | MDM2 | 0.28 | 0.64237 | 1.1 | 0.00278 | mirMAP | -0.11 | 0.00254 | NA | |
144 | hsa-miR-151a-3p | MDM4 | 0.37 | 0.37692 | 0.02 | 0.951 | mirMAP | -0.15 | 0.00087 | NA | |
145 | hsa-miR-152-3p | MDM4 | 0.1 | 0.86744 | 0.02 | 0.951 | MirTarget | -0.13 | 5.0E-5 | NA | |
146 | hsa-miR-15b-3p | MDM4 | 3.58 | 0 | 0.02 | 0.951 | mirMAP | -0.16 | 0 | NA | |
147 | hsa-miR-21-3p | MDM4 | 3.5 | 0 | 0.02 | 0.951 | MirTarget | -0.17 | 0 | NA | |
148 | hsa-miR-222-5p | MDM4 | 2.52 | 0.00142 | 0.02 | 0.951 | mirMAP | -0.11 | 0 | NA | |
149 | hsa-miR-27a-3p | MDM4 | 1.76 | 0.00022 | 0.02 | 0.951 | miRNATAP | -0.22 | 0 | NA | |
150 | hsa-miR-374b-5p | MDM4 | -0.11 | 0.76489 | 0.02 | 0.951 | mirMAP | -0.16 | 0.00198 | NA |
Num | GO | Overlap | Size | P Value | Adj. P Value |
---|---|---|---|---|---|
1 | REGULATION OF CELL CYCLE | 24 | 949 | 2.002e-21 | 9.317e-18 |
2 | SIGNAL TRANSDUCTION BY P53 CLASS MEDIATOR | 13 | 127 | 3.175e-19 | 7.387e-16 |
3 | CELL CYCLE | 24 | 1316 | 3.977e-18 | 6.169e-15 |
4 | CELL CYCLE PROCESS | 22 | 1081 | 1.96e-17 | 2.28e-14 |
5 | NEGATIVE REGULATION OF CELL CYCLE G1 S PHASE TRANSITION | 11 | 98 | 8.281e-17 | 6.393e-14 |
6 | CELL CYCLE CHECKPOINT | 13 | 194 | 8.948e-17 | 6.393e-14 |
7 | POSITIVE REGULATION OF CELL CYCLE | 15 | 332 | 9.617e-17 | 6.393e-14 |
8 | MITOTIC CELL CYCLE | 19 | 766 | 1.887e-16 | 1.081e-13 |
9 | CELLULAR RESPONSE TO STRESS | 24 | 1565 | 2.09e-16 | 1.081e-13 |
10 | REGULATION OF CELL CYCLE ARREST | 11 | 108 | 2.514e-16 | 1.17e-13 |
11 | G1 DNA DAMAGE CHECKPOINT | 10 | 73 | 2.962e-16 | 1.253e-13 |
12 | REGULATION OF PROTEIN SERINE THREONINE KINASE ACTIVITY | 16 | 470 | 6.383e-16 | 2.475e-13 |
13 | REGULATION OF CELL DEATH | 23 | 1472 | 8.409e-16 | 3.01e-13 |
14 | CELL DEATH | 20 | 1001 | 1.455e-15 | 4.37e-13 |
15 | POSITIVE REGULATION OF CELL DEATH | 17 | 605 | 1.503e-15 | 4.37e-13 |
16 | POSITIVE REGULATION OF CELL CYCLE ARREST | 10 | 85 | 1.466e-15 | 4.37e-13 |
17 | POSITIVE REGULATION OF CELL CYCLE PROCESS | 13 | 247 | 2.104e-15 | 5.759e-13 |
18 | NEGATIVE REGULATION OF CELL CYCLE | 15 | 433 | 4.895e-15 | 1.265e-12 |
19 | REGULATION OF CYCLIN DEPENDENT PROTEIN KINASE ACTIVITY | 10 | 97 | 5.789e-15 | 1.418e-12 |
20 | REGULATION OF CELL CYCLE G1 S PHASE TRANSITION | 11 | 147 | 8.149e-15 | 1.649e-12 |
21 | MITOTIC DNA INTEGRITY CHECKPOINT | 10 | 100 | 7.934e-15 | 1.649e-12 |
22 | NEGATIVE REGULATION OF CELL CYCLE PHASE TRANSITION | 11 | 146 | 7.55e-15 | 1.649e-12 |
23 | DNA INTEGRITY CHECKPOINT | 11 | 146 | 7.55e-15 | 1.649e-12 |
24 | REGULATION OF TRANSFERASE ACTIVITY | 19 | 946 | 8.856e-15 | 1.717e-12 |
25 | INTRINSIC APOPTOTIC SIGNALING PATHWAY | 11 | 152 | 1.184e-14 | 2.204e-12 |
26 | CELLULAR RESPONSE TO DNA DAMAGE STIMULUS | 17 | 720 | 2.611e-14 | 4.673e-12 |
27 | REGULATION OF KINASE ACTIVITY | 17 | 776 | 8.833e-14 | 1.522e-11 |
28 | POSITIVE REGULATION OF PROTEIN METABOLIC PROCESS | 21 | 1492 | 2.177e-13 | 3.618e-11 |
29 | NEGATIVE REGULATION OF MITOTIC CELL CYCLE | 11 | 199 | 2.344e-13 | 3.636e-11 |
30 | MITOTIC CELL CYCLE CHECKPOINT | 10 | 139 | 2.306e-13 | 3.636e-11 |
31 | REGULATION OF PROTEIN MODIFICATION PROCESS | 22 | 1710 | 2.686e-13 | 4.031e-11 |
32 | SIGNAL TRANSDUCTION IN RESPONSE TO DNA DAMAGE | 9 | 96 | 3.606e-13 | 5.244e-11 |
33 | APOPTOTIC SIGNALING PATHWAY | 12 | 289 | 4.958e-13 | 6.991e-11 |
34 | NEGATIVE REGULATION OF CELL CYCLE PROCESS | 11 | 214 | 5.207e-13 | 7.125e-11 |
35 | RESPONSE TO ABIOTIC STIMULUS | 18 | 1024 | 5.556e-13 | 7.386e-11 |
36 | REGULATION OF PHOSPHORUS METABOLIC PROCESS | 21 | 1618 | 1.054e-12 | 1.363e-10 |
37 | REGULATION OF CELL CYCLE PHASE TRANSITION | 12 | 321 | 1.711e-12 | 2.152e-10 |
38 | REGULATION OF CELL PROLIFERATION | 20 | 1496 | 2.764e-12 | 3.384e-10 |
39 | INTRACELLULAR SIGNAL TRANSDUCTION | 20 | 1572 | 6.878e-12 | 8.206e-10 |
40 | REGULATION OF MITOTIC CELL CYCLE | 13 | 468 | 7.353e-12 | 8.345e-10 |
41 | REGULATION OF APOPTOTIC SIGNALING PATHWAY | 12 | 363 | 7.229e-12 | 8.345e-10 |
42 | POSITIVE REGULATION OF INTRACELLULAR SIGNAL TRANSDUCTION | 16 | 876 | 9.153e-12 | 1.014e-09 |
43 | REGULATION OF CYSTEINE TYPE ENDOPEPTIDASE ACTIVITY | 10 | 213 | 1.661e-11 | 1.797e-09 |
44 | REGULATION OF INTRACELLULAR SIGNAL TRANSDUCTION | 20 | 1656 | 1.783e-11 | 1.843e-09 |
45 | REGULATION OF PEPTIDASE ACTIVITY | 12 | 392 | 1.77e-11 | 1.843e-09 |
46 | RESPONSE TO OXYGEN LEVELS | 11 | 311 | 3.004e-11 | 3.039e-09 |
47 | REGULATION OF SIGNAL TRANSDUCTION BY P53 CLASS MEDIATOR | 9 | 162 | 4.257e-11 | 4.215e-09 |
48 | REGULATION OF CELL CYCLE PROCESS | 13 | 558 | 6.571e-11 | 6.37e-09 |
49 | CELL CYCLE G1 S PHASE TRANSITION | 8 | 111 | 7.032e-11 | 6.416e-09 |
50 | G1 S TRANSITION OF MITOTIC CELL CYCLE | 8 | 111 | 7.032e-11 | 6.416e-09 |
51 | POSITIVE REGULATION OF APOPTOTIC SIGNALING PATHWAY | 9 | 171 | 6.916e-11 | 6.416e-09 |
52 | REGULATION OF PROTEOLYSIS | 14 | 711 | 9.531e-11 | 8.528e-09 |
53 | CELL CYCLE PHASE TRANSITION | 10 | 255 | 9.786e-11 | 8.592e-09 |
54 | AGING | 10 | 264 | 1.375e-10 | 1.185e-08 |
55 | NEGATIVE REGULATION OF CELL PROLIFERATION | 13 | 643 | 3.761e-10 | 3.182e-08 |
56 | POSITIVE REGULATION OF CATALYTIC ACTIVITY | 18 | 1518 | 3.846e-10 | 3.196e-08 |
57 | POSITIVE REGULATION OF PROTEIN MODIFICATION PROCESS | 16 | 1135 | 4.278e-10 | 3.492e-08 |
58 | POSITIVE REGULATION OF CELL COMMUNICATION | 18 | 1532 | 4.465e-10 | 3.582e-08 |
59 | POSITIVE REGULATION OF MOLECULAR FUNCTION | 19 | 1791 | 6.673e-10 | 5.262e-08 |
60 | CELL CYCLE ARREST | 8 | 154 | 9.731e-10 | 7.546e-08 |
61 | ACTIVATION OF CYSTEINE TYPE ENDOPEPTIDASE ACTIVITY | 7 | 95 | 1.027e-09 | 7.831e-08 |
62 | POSITIVE REGULATION OF PHOSPHATE METABOLIC PROCESS | 15 | 1036 | 1.239e-09 | 9.148e-08 |
63 | POSITIVE REGULATION OF PHOSPHORUS METABOLIC PROCESS | 15 | 1036 | 1.239e-09 | 9.148e-08 |
64 | INTRINSIC APOPTOTIC SIGNALING PATHWAY BY P53 CLASS MEDIATOR | 6 | 53 | 1.261e-09 | 9.167e-08 |
65 | REGULATION OF EXTRINSIC APOPTOTIC SIGNALING PATHWAY VIA DEATH DOMAIN RECEPTORS | 6 | 55 | 1.587e-09 | 1.136e-07 |
66 | REGULATION OF RESPONSE TO STRESS | 17 | 1468 | 2.07e-09 | 1.459e-07 |
67 | POSITIVE REGULATION OF RESPONSE TO STIMULUS | 19 | 1929 | 2.335e-09 | 1.622e-07 |
68 | NEGATIVE REGULATION OF PROTEIN METABOLIC PROCESS | 15 | 1087 | 2.392e-09 | 1.637e-07 |
69 | REGULATION OF DNA DAMAGE RESPONSE SIGNAL TRANSDUCTION BY P53 CLASS MEDIATOR | 5 | 28 | 3.027e-09 | 2.041e-07 |
70 | CELLULAR RESPONSE TO ABIOTIC STIMULUS | 9 | 263 | 3.13e-09 | 2.081e-07 |
71 | ZYMOGEN ACTIVATION | 7 | 112 | 3.279e-09 | 2.149e-07 |
72 | POSITIVE REGULATION OF PROTEIN SERINE THREONINE KINASE ACTIVITY | 9 | 289 | 7.122e-09 | 4.603e-07 |
73 | INTRINSIC APOPTOTIC SIGNALING PATHWAY IN RESPONSE TO DNA DAMAGE | 6 | 71 | 7.65e-09 | 4.876e-07 |
74 | REPLICATIVE SENESCENCE | 4 | 12 | 8.213e-09 | 5.164e-07 |
75 | DNA REPLICATION | 8 | 208 | 1.042e-08 | 6.466e-07 |
76 | REGULATION OF CELLULAR RESPONSE TO STRESS | 12 | 691 | 1.124e-08 | 6.879e-07 |
77 | POSITIVE REGULATION OF DNA DAMAGE RESPONSE SIGNAL TRANSDUCTION BY P53 CLASS MEDIATOR | 4 | 13 | 1.184e-08 | 7.158e-07 |
78 | RESPONSE TO DRUG | 10 | 431 | 1.547e-08 | 9.226e-07 |
79 | RESPONSE TO IONIZING RADIATION | 7 | 145 | 1.986e-08 | 1.17e-06 |
80 | CELL DIVISION | 10 | 460 | 2.861e-08 | 1.654e-06 |
81 | REGULATION OF EXTRINSIC APOPTOTIC SIGNALING PATHWAY | 7 | 153 | 2.879e-08 | 1.654e-06 |
82 | POSITIVE REGULATION OF PEPTIDASE ACTIVITY | 7 | 154 | 3.012e-08 | 1.709e-06 |
83 | POSITIVE REGULATION OF SIGNAL TRANSDUCTION BY P53 CLASS MEDIATOR | 4 | 17 | 3.919e-08 | 2.171e-06 |
84 | POSITIVE REGULATION OF TRANSFERASE ACTIVITY | 11 | 616 | 3.889e-08 | 2.171e-06 |
85 | POSITIVE REGULATION OF KINASE ACTIVITY | 10 | 482 | 4.438e-08 | 2.429e-06 |
86 | POSITIVE REGULATION OF PROTEOLYSIS | 9 | 363 | 5.09e-08 | 2.754e-06 |
87 | CELLULAR RESPONSE TO EXTERNAL STIMULUS | 8 | 264 | 6.637e-08 | 3.549e-06 |
88 | NEGATIVE REGULATION OF CATALYTIC ACTIVITY | 12 | 829 | 8.338e-08 | 4.409e-06 |
89 | RESPONSE TO NITROGEN COMPOUND | 12 | 859 | 1.227e-07 | 6.416e-06 |
90 | NEGATIVE REGULATION OF CELL DEATH | 12 | 872 | 1.444e-07 | 7.466e-06 |
91 | RESPONSE TO RADIATION | 9 | 413 | 1.527e-07 | 7.806e-06 |
92 | NEGATIVE REGULATION OF MOLECULAR FUNCTION | 13 | 1079 | 1.8e-07 | 9.106e-06 |
93 | RESPONSE TO UV | 6 | 126 | 2.416e-07 | 1.209e-05 |
94 | RESPONSE TO EXTRACELLULAR STIMULUS | 9 | 441 | 2.656e-07 | 1.315e-05 |
95 | CELL AGING | 5 | 67 | 2.801e-07 | 1.372e-05 |
96 | PROTEIN STABILIZATION | 6 | 131 | 3.043e-07 | 1.475e-05 |
97 | DNA METABOLIC PROCESS | 11 | 758 | 3.15e-07 | 1.511e-05 |
98 | RESPONSE TO ESTROGEN | 7 | 218 | 3.239e-07 | 1.538e-05 |
99 | REGULATION OF PROTEIN STABILITY | 7 | 221 | 3.553e-07 | 1.67e-05 |
100 | REGULATION OF PROTEIN INSERTION INTO MITOCHONDRIAL MEMBRANE INVOLVED IN APOPTOTIC SIGNALING PATHWAY | 4 | 29 | 3.84e-07 | 1.769e-05 |
101 | POSITIVE REGULATION OF PROTEIN INSERTION INTO MITOCHONDRIAL MEMBRANE INVOLVED IN APOPTOTIC SIGNALING PATHWAY | 4 | 29 | 3.84e-07 | 1.769e-05 |
102 | CELLULAR RESPONSE TO RADIATION | 6 | 137 | 3.964e-07 | 1.808e-05 |
103 | INTRINSIC APOPTOTIC SIGNALING PATHWAY IN RESPONSE TO DNA DAMAGE BY P53 CLASS MEDIATOR | 4 | 30 | 4.424e-07 | 1.96e-05 |
104 | NEGATIVE REGULATION OF CELL MATRIX ADHESION | 4 | 30 | 4.424e-07 | 1.96e-05 |
105 | RESPONSE TO X RAY | 4 | 30 | 4.424e-07 | 1.96e-05 |
106 | POSITIVE REGULATION OF MAPK CASCADE | 9 | 470 | 4.534e-07 | 1.99e-05 |
107 | CELLULAR RESPONSE TO OXYGEN LEVELS | 6 | 143 | 5.103e-07 | 2.219e-05 |
108 | NEGATIVE REGULATION OF TRANSFERASE ACTIVITY | 8 | 351 | 5.829e-07 | 2.488e-05 |
109 | INTRINSIC APOPTOTIC SIGNALING PATHWAY IN RESPONSE TO ENDOPLASMIC RETICULUM STRESS | 4 | 32 | 5.788e-07 | 2.488e-05 |
110 | REGULATION OF PROTEIN EXPORT FROM NUCLEUS | 4 | 33 | 6.576e-07 | 2.782e-05 |
111 | POSITIVE REGULATION OF CELLULAR PROTEIN LOCALIZATION | 8 | 360 | 7.054e-07 | 2.957e-05 |
112 | RESPONSE TO STEROID HORMONE | 9 | 497 | 7.226e-07 | 3.002e-05 |
113 | ORGAN REGENERATION | 5 | 83 | 8.216e-07 | 3.353e-05 |
114 | NEGATIVE REGULATION OF KINASE ACTIVITY | 7 | 250 | 8.145e-07 | 3.353e-05 |
115 | POSITIVE REGULATION OF MITOCHONDRIAL OUTER MEMBRANE PERMEABILIZATION INVOLVED IN APOPTOTIC SIGNALING PATHWAY | 4 | 36 | 9.423e-07 | 3.78e-05 |
116 | POSITIVE REGULATION OF CYCLIN DEPENDENT PROTEIN KINASE ACTIVITY | 4 | 36 | 9.423e-07 | 3.78e-05 |
117 | REGENERATION | 6 | 161 | 1.023e-06 | 4.069e-05 |
118 | PROTEIN MATURATION | 7 | 265 | 1.203e-06 | 4.742e-05 |
119 | REGULATION OF CELL MATRIX ADHESION | 5 | 90 | 1.23e-06 | 4.81e-05 |
120 | ACTIVATION OF MAPKKK ACTIVITY | 3 | 11 | 1.404e-06 | 5.445e-05 |
121 | RESPONSE TO LIPID | 11 | 888 | 1.501e-06 | 5.773e-05 |
122 | REGULATION OF CELLULAR PROTEIN LOCALIZATION | 9 | 552 | 1.723e-06 | 6.571e-05 |
123 | NEGATIVE REGULATION OF EXTRINSIC APOPTOTIC SIGNALING PATHWAY | 5 | 98 | 1.878e-06 | 7.103e-05 |
124 | REGULATION OF EPITHELIAL CELL PROLIFERATION | 7 | 285 | 1.951e-06 | 7.271e-05 |
125 | REGULATION OF MITOCHONDRIAL OUTER MEMBRANE PERMEABILIZATION INVOLVED IN APOPTOTIC SIGNALING PATHWAY | 4 | 43 | 1.953e-06 | 7.271e-05 |
126 | NEGATIVE REGULATION OF PHOSPHORYLATION | 8 | 422 | 2.314e-06 | 8.547e-05 |
127 | NEGATIVE REGULATION OF RESPONSE TO STIMULUS | 13 | 1360 | 2.489e-06 | 9.12e-05 |
128 | RESPONSE TO NUTRIENT | 6 | 191 | 2.764e-06 | 0.0001005 |
129 | POSITIVE REGULATION OF P38MAPK CASCADE | 3 | 14 | 3.084e-06 | 0.0001113 |
130 | NEGATIVE REGULATION OF APOPTOTIC SIGNALING PATHWAY | 6 | 200 | 3.606e-06 | 0.0001291 |
131 | NEGATIVE REGULATION OF CELL COMMUNICATION | 12 | 1192 | 3.957e-06 | 0.0001406 |
132 | CELLULAR RESPONSE TO IONIZING RADIATION | 4 | 52 | 4.227e-06 | 0.0001479 |
133 | NEGATIVE REGULATION OF PROTEIN MODIFICATION PROCESS | 9 | 616 | 4.227e-06 | 0.0001479 |
134 | NEGATIVE REGULATION OF CELL SUBSTRATE ADHESION | 4 | 53 | 4.565e-06 | 0.0001562 |
135 | POSITIVE REGULATION OF EXTRINSIC APOPTOTIC SIGNALING PATHWAY | 4 | 53 | 4.565e-06 | 0.0001562 |
136 | REGULATION OF INTRACELLULAR TRANSPORT | 9 | 621 | 4.513e-06 | 0.0001562 |
137 | NEGATIVE REGULATION OF PROTEOLYSIS | 7 | 329 | 5.031e-06 | 0.0001704 |
138 | RESPONSE TO ENDOGENOUS STIMULUS | 13 | 1450 | 5.055e-06 | 0.0001704 |
139 | REGULATION OF GROWTH | 9 | 633 | 5.271e-06 | 0.0001765 |
140 | POSITIVE REGULATION OF EXTRINSIC APOPTOTIC SIGNALING PATHWAY VIA DEATH DOMAIN RECEPTORS | 3 | 17 | 5.737e-06 | 0.0001907 |
141 | REGULATION OF MITOCHONDRION ORGANIZATION | 6 | 218 | 5.918e-06 | 0.0001953 |
142 | APOPTOTIC MITOCHONDRIAL CHANGES | 4 | 57 | 6.12e-06 | 0.0002005 |
143 | REGULATION OF NUCLEOCYTOPLASMIC TRANSPORT | 6 | 220 | 6.236e-06 | 0.0002016 |
144 | REGULATION OF DNA METABOLIC PROCESS | 7 | 340 | 6.24e-06 | 0.0002016 |
145 | NEGATIVE REGULATION OF PROTEIN SERINE THREONINE KINASE ACTIVITY | 5 | 126 | 6.467e-06 | 0.0002075 |
146 | REGULATION OF CELL CYCLE G2 M PHASE TRANSITION | 4 | 59 | 7.03e-06 | 0.0002225 |
147 | REGULATION OF ESTABLISHMENT OF PROTEIN LOCALIZATION TO MITOCHONDRION | 5 | 128 | 6.984e-06 | 0.0002225 |
148 | REGULATION OF MAPK CASCADE | 9 | 660 | 7.386e-06 | 0.0002322 |
149 | POSITIVE REGULATION OF PROTEIN EXPORT FROM NUCLEUS | 3 | 19 | 8.151e-06 | 0.0002545 |
150 | RESPONSE TO ENDOPLASMIC RETICULUM STRESS | 6 | 233 | 8.659e-06 | 0.0002686 |
151 | RESPONSE TO ALCOHOL | 7 | 362 | 9.391e-06 | 0.0002894 |
152 | NEGATIVE REGULATION OF CELL CYCLE ARREST | 3 | 20 | 9.576e-06 | 0.0002931 |
153 | POSITIVE REGULATION OF RESPONSE TO DNA DAMAGE STIMULUS | 4 | 64 | 9.74e-06 | 0.0002962 |
154 | POSITIVE REGULATION OF INTRACELLULAR TRANSPORT | 7 | 370 | 1.082e-05 | 0.000327 |
155 | CELLULAR RESPONSE TO UV | 4 | 66 | 1.102e-05 | 0.0003307 |
156 | RESPONSE TO EXTERNAL STIMULUS | 14 | 1821 | 1.168e-05 | 0.0003483 |
157 | REGULATION OF HYDROLASE ACTIVITY | 12 | 1327 | 1.185e-05 | 0.0003513 |
158 | RESPONSE TO HORMONE | 10 | 893 | 1.198e-05 | 0.0003527 |
159 | POSITIVE REGULATION OF PROTEIN OLIGOMERIZATION | 3 | 22 | 1.29e-05 | 0.0003728 |
160 | RELEASE OF CYTOCHROME C FROM MITOCHONDRIA | 3 | 22 | 1.29e-05 | 0.0003728 |
161 | REGULATION OF RESPONSE TO DNA DAMAGE STIMULUS | 5 | 145 | 1.281e-05 | 0.0003728 |
162 | RESPONSE TO ESTRADIOL | 5 | 146 | 1.324e-05 | 0.0003804 |
163 | REGULATION OF MEMBRANE PERMEABILITY | 4 | 70 | 1.393e-05 | 0.0003976 |
164 | NEGATIVE REGULATION OF PHOSPHORUS METABOLIC PROCESS | 8 | 541 | 1.428e-05 | 0.0004028 |
165 | NEGATIVE REGULATION OF PHOSPHATE METABOLIC PROCESS | 8 | 541 | 1.428e-05 | 0.0004028 |
166 | RESPONSE TO MAGNESIUM ION | 3 | 23 | 1.481e-05 | 0.0004151 |
167 | RESPONSE TO ORGANIC CYCLIC COMPOUND | 10 | 917 | 1.508e-05 | 0.0004202 |
168 | RESPONSE TO OXYGEN CONTAINING COMPOUND | 12 | 1381 | 1.771e-05 | 0.0004906 |
169 | POSITIVE REGULATION OF ORGANELLE ORGANIZATION | 8 | 573 | 2.16e-05 | 0.0005891 |
170 | RESPONSE TO CORTICOSTERONE | 3 | 26 | 2.165e-05 | 0.0005891 |
171 | REGULATION OF P38MAPK CASCADE | 3 | 26 | 2.165e-05 | 0.0005891 |
172 | REGULATION OF LEUKOCYTE APOPTOTIC PROCESS | 4 | 79 | 2.251e-05 | 0.0006091 |
173 | ACTIVATION OF PROTEIN KINASE ACTIVITY | 6 | 279 | 2.403e-05 | 0.0006462 |
174 | RESPONSE TO LIGHT STIMULUS | 6 | 280 | 2.452e-05 | 0.0006556 |
175 | REGULATION OF FIBROBLAST PROLIFERATION | 4 | 81 | 2.486e-05 | 0.0006609 |
176 | RESPONSE TO CARBOHYDRATE | 5 | 168 | 2.607e-05 | 0.0006891 |
177 | POSITIVE REGULATION OF LEUKOCYTE APOPTOTIC PROCESS | 3 | 28 | 2.72e-05 | 0.000715 |
178 | REGULATION OF CELL SUBSTRATE ADHESION | 5 | 173 | 3e-05 | 0.0007843 |
179 | POSITIVE REGULATION OF DNA REPLICATION | 4 | 86 | 3.148e-05 | 0.0008184 |
180 | RESPONSE TO CORTICOSTEROID | 5 | 176 | 3.258e-05 | 0.0008421 |
181 | NEGATIVE REGULATION OF B CELL ACTIVATION | 3 | 30 | 3.361e-05 | 0.000864 |
182 | RESPONSE TO KETONE | 5 | 182 | 3.824e-05 | 0.0009776 |
183 | CELLULAR RESPONSE TO LIGHT STIMULUS | 4 | 91 | 3.933e-05 | 0.0009999 |
184 | NEGATIVE REGULATION OF CYCLIN DEPENDENT PROTEIN KINASE ACTIVITY | 3 | 32 | 4.094e-05 | 0.001033 |
185 | MITOCHONDRIAL MEMBRANE ORGANIZATION | 4 | 92 | 4.105e-05 | 0.001033 |
186 | CELLULAR RESPONSE TO EXTRACELLULAR STIMULUS | 5 | 188 | 4.464e-05 | 0.001117 |
187 | REGULATION OF CELL AGING | 3 | 33 | 4.497e-05 | 0.001119 |
188 | PROTEIN KINASE B SIGNALING | 3 | 34 | 4.925e-05 | 0.001212 |
189 | NEGATIVE REGULATION OF EXTRINSIC APOPTOTIC SIGNALING PATHWAY VIA DEATH DOMAIN RECEPTORS | 3 | 34 | 4.925e-05 | 0.001212 |
190 | NEGATIVE REGULATION OF PROTEIN PROCESSING | 3 | 35 | 5.378e-05 | 0.001283 |
191 | REGULATION OF PROTEIN OLIGOMERIZATION | 3 | 35 | 5.378e-05 | 0.001283 |
192 | NEURON APOPTOTIC PROCESS | 3 | 35 | 5.378e-05 | 0.001283 |
193 | RESPONSE TO MINERALOCORTICOID | 3 | 35 | 5.378e-05 | 0.001283 |
194 | NEGATIVE REGULATION OF PROTEIN MATURATION | 3 | 35 | 5.378e-05 | 0.001283 |
195 | REGULATION OF RESPONSE TO REACTIVE OXYGEN SPECIES | 3 | 35 | 5.378e-05 | 0.001283 |
196 | RESPONSE TO METAL ION | 6 | 333 | 6.445e-05 | 0.00153 |
197 | REGULATION OF GLUCOSE METABOLIC PROCESS | 4 | 106 | 7.145e-05 | 0.001688 |
198 | CELLULAR RESPONSE TO ESTROGEN STIMULUS | 3 | 41 | 8.683e-05 | 0.002041 |
199 | POSITIVE REGULATION OF ESTABLISHMENT OF PROTEIN LOCALIZATION | 7 | 514 | 8.791e-05 | 0.002056 |
200 | NEGATIVE REGULATION OF EPITHELIAL CELL PROLIFERATION | 4 | 115 | 9.809e-05 | 0.002282 |
201 | POSITIVE REGULATION OF CELLULAR COMPONENT ORGANIZATION | 10 | 1152 | 0.0001047 | 0.002424 |
202 | REGULATION OF RELEASE OF CYTOCHROME C FROM MITOCHONDRIA | 3 | 44 | 0.0001074 | 0.002474 |
203 | POSITIVE REGULATION OF NUCLEOCYTOPLASMIC TRANSPORT | 4 | 121 | 0.0001194 | 0.002724 |
204 | REGULATION OF B CELL ACTIVATION | 4 | 121 | 0.0001194 | 0.002724 |
205 | POSITIVE REGULATION OF MITOTIC CELL CYCLE | 4 | 123 | 0.0001273 | 0.002888 |
206 | REGULATION OF PROTEIN LOCALIZATION | 9 | 950 | 0.0001282 | 0.002895 |
207 | NEGATIVE REGULATION OF GROWTH | 5 | 236 | 0.0001306 | 0.002915 |
208 | NEURON DEATH | 3 | 47 | 0.0001309 | 0.002915 |
209 | POSITIVE REGULATION OF NEURON APOPTOTIC PROCESS | 3 | 47 | 0.0001309 | 0.002915 |
210 | REGULATION OF INTRACELLULAR PROTEIN TRANSPORT | 6 | 381 | 0.000135 | 0.002991 |
211 | REGULATION OF SMOOTH MUSCLE CELL MIGRATION | 3 | 49 | 0.0001483 | 0.003271 |
212 | NEGATIVE REGULATION OF PEPTIDASE ACTIVITY | 5 | 245 | 0.0001556 | 0.003415 |
213 | RESPONSE TO GAMMA RADIATION | 3 | 50 | 0.0001576 | 0.003442 |
214 | REGULATION OF NEURON DEATH | 5 | 252 | 0.0001774 | 0.003858 |
215 | RESPONSE TO ETHANOL | 4 | 136 | 0.0001874 | 0.004039 |
216 | POSITIVE REGULATION OF FIBROBLAST PROLIFERATION | 3 | 53 | 0.0001875 | 0.004039 |
217 | REGULATION OF LYMPHOCYTE APOPTOTIC PROCESS | 3 | 54 | 0.0001983 | 0.004231 |
218 | CELL CYCLE G2 M PHASE TRANSITION | 4 | 138 | 0.0001982 | 0.004231 |
219 | REGULATION OF B CELL PROLIFERATION | 3 | 55 | 0.0002094 | 0.004449 |
220 | MITOCHONDRION ORGANIZATION | 7 | 594 | 0.000215 | 0.004547 |
221 | NEGATIVE REGULATION OF DEVELOPMENTAL PROCESS | 8 | 801 | 0.000225 | 0.004736 |
222 | RAS PROTEIN SIGNAL TRANSDUCTION | 4 | 143 | 0.0002271 | 0.00476 |
223 | REGULATION OF TRANSPORT | 12 | 1804 | 0.0002375 | 0.004955 |
224 | REGULATION OF CELLULAR LOCALIZATION | 10 | 1277 | 0.0002438 | 0.005063 |
225 | REGULATION OF EPITHELIAL CELL APOPTOTIC PROCESS | 3 | 59 | 0.0002579 | 0.005332 |
226 | RESPONSE TO TRANSITION METAL NANOPARTICLE | 4 | 148 | 0.000259 | 0.005332 |
227 | DEOXYRIBONUCLEOTIDE BIOSYNTHETIC PROCESS | 2 | 12 | 0.0002804 | 0.005722 |
228 | POSITIVE REGULATION OF INSULIN LIKE GROWTH FACTOR RECEPTOR SIGNALING PATHWAY | 2 | 12 | 0.0002804 | 0.005722 |
229 | NEGATIVE REGULATION OF INTRACELLULAR SIGNAL TRANSDUCTION | 6 | 437 | 0.0002833 | 0.005755 |
230 | MITOTIC CELL CYCLE ARREST | 2 | 13 | 0.0003309 | 0.006663 |
231 | ACTIVATION OF CYSTEINE TYPE ENDOPEPTIDASE ACTIVITY INVOLVED IN APOPTOTIC SIGNALING PATHWAY | 2 | 13 | 0.0003309 | 0.006663 |
232 | RESPONSE TO PURINE CONTAINING COMPOUND | 4 | 158 | 0.0003322 | 0.006663 |
233 | REGULATION OF JNK CASCADE | 4 | 159 | 0.0003403 | 0.006795 |
234 | REGULATION OF RESPONSE TO OXIDATIVE STRESS | 3 | 65 | 0.0003436 | 0.006832 |
235 | REGULATION OF DNA REPLICATION | 4 | 161 | 0.0003568 | 0.007064 |
236 | POSITIVE REGULATION OF NEURON DEATH | 3 | 67 | 0.0003757 | 0.007407 |
237 | MITOCHONDRIAL DNA METABOLIC PROCESS | 2 | 14 | 0.0003856 | 0.007475 |
238 | REGULATION OF FIBRINOLYSIS | 2 | 14 | 0.0003856 | 0.007475 |
239 | DETERMINATION OF ADULT LIFESPAN | 2 | 14 | 0.0003856 | 0.007475 |
240 | REGULATION OF SMOOTH MUSCLE CELL APOPTOTIC PROCESS | 2 | 14 | 0.0003856 | 0.007475 |
241 | POSITIVE REGULATION OF CELL CYCLE PHASE TRANSITION | 3 | 68 | 0.0003925 | 0.007577 |
242 | POSITIVE REGULATION OF MITOCHONDRION ORGANIZATION | 4 | 167 | 0.0004098 | 0.00788 |
243 | DENTATE GYRUS DEVELOPMENT | 2 | 15 | 0.0004443 | 0.008403 |
244 | NEGATIVE REGULATION OF B CELL PROLIFERATION | 2 | 15 | 0.0004443 | 0.008403 |
245 | RESPONSE TO VITAMIN E | 2 | 15 | 0.0004443 | 0.008403 |
246 | RESPONSE TO BIOTIC STIMULUS | 8 | 886 | 0.0004437 | 0.008403 |
247 | REGULATION OF CARBOHYDRATE METABOLIC PROCESS | 4 | 172 | 0.0004582 | 0.008631 |
248 | RESPONSE TO INORGANIC SUBSTANCE | 6 | 479 | 0.0004617 | 0.008662 |
249 | DNA REPAIR | 6 | 480 | 0.0004668 | 0.008723 |
250 | REGULATION OF CYTOPLASMIC TRANSPORT | 6 | 481 | 0.000472 | 0.008784 |
251 | REGULATION OF CELL ACTIVATION | 6 | 484 | 0.0004877 | 0.009041 |
252 | NEGATIVE REGULATION OF ADHERENS JUNCTION ORGANIZATION | 2 | 16 | 0.0005071 | 0.009253 |
253 | NEGATIVE REGULATION OF SMOOTH MUSCLE CELL MIGRATION | 2 | 16 | 0.0005071 | 0.009253 |
254 | REGULATION OF PROTEIN HOMOOLIGOMERIZATION | 2 | 16 | 0.0005071 | 0.009253 |
255 | POSITIVE REGULATION OF DEVELOPMENTAL PROCESS | 9 | 1142 | 0.000504 | 0.009253 |
256 | MITOCHONDRIAL TRANSPORT | 4 | 177 | 0.0005104 | 0.009278 |
257 | REGULATION OF MAP KINASE ACTIVITY | 5 | 319 | 0.0005245 | 0.009497 |
258 | PHOSPHATE CONTAINING COMPOUND METABOLIC PROCESS | 12 | 1977 | 0.0005529 | 0.009971 |
Num | GO | Overlap | Size | P Value | Adj. P Value |
---|---|---|---|---|---|
1 | CYCLIN DEPENDENT PROTEIN SERINE THREONINE KINASE REGULATOR ACTIVITY | 5 | 28 | 3.027e-09 | 2.812e-06 |
2 | KINASE BINDING | 11 | 606 | 3.291e-08 | 1.529e-05 |
3 | ENZYME BINDING | 16 | 1737 | 1.834e-07 | 5.679e-05 |
4 | KINASE REGULATOR ACTIVITY | 6 | 186 | 2.37e-06 | 0.0005505 |
5 | CYCLIN BINDING | 3 | 19 | 8.151e-06 | 0.001515 |
6 | P53 BINDING | 4 | 67 | 1.17e-05 | 0.001811 |
7 | PROTEIN COMPLEX BINDING | 10 | 935 | 1.785e-05 | 0.002368 |
8 | ENZYME REGULATOR ACTIVITY | 10 | 959 | 2.221e-05 | 0.002579 |
9 | PROTEIN SERINE THREONINE KINASE INHIBITOR ACTIVITY | 3 | 30 | 3.361e-05 | 0.003469 |
10 | CYCLIN DEPENDENT PROTEIN KINASE ACTIVITY | 3 | 34 | 4.925e-05 | 0.004575 |
11 | MACROMOLECULAR COMPLEX BINDING | 11 | 1399 | 0.000107 | 0.009035 |
Num | GO | Overlap | Size | P Value | Adj. P Value |
---|---|---|---|---|---|
1 | CYCLIN DEPENDENT PROTEIN KINASE HOLOENZYME COMPLEX | 7 | 31 | 2.695e-13 | 1.574e-10 |
2 | PROTEIN KINASE COMPLEX | 7 | 90 | 6.995e-10 | 2.043e-07 |
3 | TRANSFERASE COMPLEX TRANSFERRING PHOSPHORUS CONTAINING GROUPS | 7 | 237 | 5.691e-07 | 0.0001108 |
Num | Pathway | Pathview | Overlap | Size | P Value | Adj. P Value |
---|---|---|---|---|---|---|
1 | hsa04115_p53_signaling_pathway | 42 | 69 | 3.731e-111 | 6.715e-109 | |
2 | hsa04110_Cell_cycle | 16 | 128 | 4.35e-25 | 3.915e-23 | |
3 | hsa04151_PI3K_AKT_signaling_pathway | 12 | 351 | 4.88e-12 | 2.928e-10 | |
4 | hsa04390_Hippo_signaling_pathway | 6 | 154 | 7.887e-07 | 3.549e-05 | |
5 | hsa04510_Focal_adhesion | 6 | 200 | 3.606e-06 | 0.0001298 | |
6 | hsa04210_Apoptosis | 4 | 89 | 3.604e-05 | 0.001081 | |
7 | hsa04114_Oocyte_meiosis | 4 | 114 | 9.482e-05 | 0.002438 | |
8 | hsa04010_MAPK_signaling_pathway | 4 | 268 | 0.002365 | 0.05322 | |
9 | hsa04960_Aldosterone.regulated_sodium_reabsorption | 2 | 42 | 0.003515 | 0.06873 | |
10 | hsa04310_Wnt_signaling_pathway | 3 | 151 | 0.003904 | 0.06873 | |
11 | hsa04630_Jak.STAT_signaling_pathway | 3 | 155 | 0.0042 | 0.06873 | |
12 | hsa00480_Glutathione_metabolism | 2 | 50 | 0.004948 | 0.07421 | |
13 | hsa04914_Progesterone.mediated_oocyte_maturation | 2 | 87 | 0.01439 | 0.1992 | |
14 | hsa00240_Pyrimidine_metabolism | 2 | 99 | 0.01836 | 0.2361 | |
15 | hsa04650_Natural_killer_cell_mediated_cytotoxicity | 2 | 136 | 0.0331 | 0.3972 | |
16 | hsa00230_Purine_metabolism | 2 | 162 | 0.04545 | 0.5114 |
Num | lncRNA | miRNAs | miRNAs count | Gene | Sponge regulatory network | lncRNA log2FC | lncRNA pvalue | Gene log2FC | Gene pvalue | lncRNA-gene Pearson correlation |
---|---|---|---|---|---|---|---|---|---|---|
1 | MAGI2-AS3 |
hsa-miR-16-1-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-19b-3p;hsa-miR-200a-5p;hsa-miR-200b-5p;hsa-miR-20a-5p;hsa-miR-3065-5p;hsa-miR-33a-3p;hsa-miR-500a-5p;hsa-miR-576-5p;hsa-miR-590-3p;hsa-miR-616-5p | 13 | THBS1 | Sponge network | -4.563 | 0 | -3.751 | 0.0001 | 0.664 |
2 | HAND2-AS1 |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-32-3p;hsa-miR-33a-3p;hsa-miR-486-5p;hsa-miR-629-5p;hsa-miR-940 | 15 | IGF1 | Sponge network | -7.871 | 0 | -4.485 | 0.00149 | 0.653 |
3 | RP11-166D19.1 |
hsa-miR-16-1-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-19b-3p;hsa-miR-200a-5p;hsa-miR-200b-5p;hsa-miR-20a-5p;hsa-miR-33a-3p;hsa-miR-576-5p;hsa-miR-590-3p;hsa-miR-616-5p | 11 | THBS1 | Sponge network | -4.209 | 2.0E-5 | -3.751 | 0.0001 | 0.639 |
4 | EMX2OS |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-32-3p;hsa-miR-452-5p;hsa-miR-486-5p;hsa-miR-629-5p;hsa-miR-940 | 14 | IGF1 | Sponge network | -6.205 | 0.00015 | -4.485 | 0.00149 | 0.631 |
5 | MIR143HG |
hsa-miR-16-1-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-19b-3p;hsa-miR-200a-5p;hsa-miR-200b-5p;hsa-miR-20a-5p;hsa-miR-3065-5p;hsa-miR-33a-3p;hsa-miR-576-5p;hsa-miR-590-3p;hsa-miR-616-5p | 12 | THBS1 | Sponge network | -6.51 | 0 | -3.751 | 0.0001 | 0.603 |
6 | DNM3OS |
hsa-miR-16-1-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-186-5p;hsa-miR-19b-3p;hsa-miR-200a-5p;hsa-miR-200b-5p;hsa-miR-20a-5p;hsa-miR-3065-5p;hsa-miR-33a-3p;hsa-miR-576-5p;hsa-miR-590-3p;hsa-miR-616-5p | 13 | THBS1 | Sponge network | -3.933 | 0.00059 | -3.751 | 0.0001 | 0.584 |
7 | RP11-389C8.2 |
hsa-let-7f-1-3p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-301a-3p;hsa-miR-33a-3p | 10 | IGF1 | Sponge network | -3.089 | 2.0E-5 | -4.485 | 0.00149 | 0.575 |
8 | MAGI2-AS3 |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-301a-3p;hsa-miR-32-3p;hsa-miR-33a-3p;hsa-miR-576-5p;hsa-miR-629-5p;hsa-miR-940 | 16 | IGF1 | Sponge network | -4.563 | 0 | -4.485 | 0.00149 | 0.572 |
9 | RP11-887P2.5 |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-27a-3p;hsa-miR-486-5p;hsa-miR-576-5p;hsa-miR-940 | 11 | IGF1 | Sponge network | -9.865 | 1.0E-5 | -4.485 | 0.00149 | 0.567 |
10 | AC003090.1 | hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-576-5p | 11 | IGF1 | Sponge network | -7.817 | 0.00161 | -4.485 | 0.00149 | 0.561 |
11 | MEG3 |
hsa-let-7a-5p;hsa-miR-16-1-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-19b-3p;hsa-miR-200a-5p;hsa-miR-200b-5p;hsa-miR-20a-5p;hsa-miR-33a-3p;hsa-miR-576-5p | 10 | THBS1 | Sponge network | -3.613 | 0.00075 | -3.751 | 0.0001 | 0.544 |
12 | MIR497HG |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-301a-3p;hsa-miR-33a-3p;hsa-miR-940 | 13 | IGF1 | Sponge network | -6.146 | 0.00024 | -4.485 | 0.00149 | 0.518 |
13 | ADAMTS9-AS1 |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-301a-3p;hsa-miR-576-5p;hsa-miR-629-5p;hsa-miR-940 | 14 | IGF1 | Sponge network | -8.573 | 0.00012 | -4.485 | 0.00149 | 0.499 |
14 | WT1-AS |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-301a-3p;hsa-miR-32-3p;hsa-miR-33a-3p;hsa-miR-576-5p;hsa-miR-629-5p;hsa-miR-940 | 16 | IGF1 | Sponge network | -6.875 | 2.0E-5 | -4.485 | 0.00149 | 0.493 |
15 | MIR143HG |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-301a-3p;hsa-miR-33a-3p;hsa-miR-576-5p;hsa-miR-629-5p;hsa-miR-940 | 14 | IGF1 | Sponge network | -6.51 | 0 | -4.485 | 0.00149 | 0.49 |
16 | DNM3OS |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-301a-3p;hsa-miR-33a-3p;hsa-miR-576-5p;hsa-miR-940 | 14 | IGF1 | Sponge network | -3.933 | 0.00059 | -4.485 | 0.00149 | 0.483 |
17 | RP11-166D19.1 |
hsa-let-7f-1-3p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-33a-3p;hsa-miR-452-5p;hsa-miR-576-5p | 12 | IGF1 | Sponge network | -4.209 | 2.0E-5 | -4.485 | 0.00149 | 0.477 |
18 | AC005682.5 | hsa-miR-106a-5p;hsa-miR-10a-3p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-191-5p;hsa-miR-200a-3p;hsa-miR-20b-5p;hsa-miR-28-5p;hsa-miR-3065-3p;hsa-miR-3065-5p | 11 | CCND2 | Sponge network | -2.193 | 0.07184 | -2.811 | 0.0014 | 0.394 |
19 | ZNF667-AS1 | hsa-let-7f-1-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-452-5p;hsa-miR-629-5p | 10 | IGF1 | Sponge network | -4.019 | 0.00137 | -4.485 | 0.00149 | 0.383 |
20 | RP11-244O19.1 | hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-200a-3p;hsa-miR-3065-3p;hsa-miR-3065-5p;hsa-miR-30d-3p;hsa-miR-93-5p | 12 | CCND2 | Sponge network | -1.318 | 0.0924 | -2.811 | 0.0014 | 0.383 |
21 | FAM66C |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-940 | 10 | IGF1 | Sponge network | -2.927 | 0.00012 | -4.485 | 0.00149 | 0.38 |
22 | DIO3OS | hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-200a-3p;hsa-miR-20b-5p;hsa-miR-324-3p;hsa-miR-378a-3p | 13 | CCND2 | Sponge network | -4.295 | 0.00689 | -2.811 | 0.0014 | 0.374 |
23 | ACTA2-AS1 |
hsa-miR-16-1-3p;hsa-miR-17-5p;hsa-miR-182-5p;hsa-miR-19b-3p;hsa-miR-200a-5p;hsa-miR-200b-5p;hsa-miR-20a-5p;hsa-miR-33a-3p;hsa-miR-576-5p;hsa-miR-590-3p | 10 | THBS1 | Sponge network | -6.142 | 0.00223 | -3.751 | 0.0001 | 0.37 |
24 | RP11-166D19.1 |
hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-200a-3p;hsa-miR-20b-5p;hsa-miR-224-3p;hsa-miR-324-3p;hsa-miR-33a-3p;hsa-miR-378a-3p;hsa-miR-429;hsa-miR-550a-5p;hsa-miR-96-5p | 18 | CCND2 | Sponge network | -4.209 | 2.0E-5 | -2.811 | 0.0014 | 0.339 |
25 | RP11-439M11.1 | hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-15b-5p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-20b-5p;hsa-miR-324-3p | 10 | CCND2 | Sponge network | -2.662 | 0.21003 | -2.811 | 0.0014 | 0.337 |
26 | ACTA2-AS1 |
hsa-let-7f-1-3p;hsa-miR-103a-2-5p;hsa-miR-130b-3p;hsa-miR-15b-3p;hsa-miR-16-1-3p;hsa-miR-19a-3p;hsa-miR-19b-1-5p;hsa-miR-19b-3p;hsa-miR-20a-3p;hsa-miR-27a-3p;hsa-miR-33a-3p;hsa-miR-576-5p | 12 | IGF1 | Sponge network | -6.142 | 0.00223 | -4.485 | 0.00149 | 0.332 |
27 | MAGI2-AS3 |
hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-200a-3p;hsa-miR-20b-5p;hsa-miR-224-3p;hsa-miR-3065-5p;hsa-miR-30d-3p;hsa-miR-33a-3p;hsa-miR-378a-3p;hsa-miR-429;hsa-miR-9-3p;hsa-miR-93-5p | 19 | CCND2 | Sponge network | -4.563 | 0 | -2.811 | 0.0014 | 0.315 |
28 | RP11-284N8.3 | hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-200a-3p;hsa-miR-3065-5p;hsa-miR-324-3p;hsa-miR-93-5p;hsa-miR-96-5p | 10 | CCND2 | Sponge network | -0.845 | 0.52848 | -2.811 | 0.0014 | 0.313 |
29 | GAS6-AS2 | hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-200a-3p;hsa-miR-20b-5p;hsa-miR-28-5p;hsa-miR-3065-5p;hsa-miR-324-3p;hsa-miR-429 | 14 | CCND2 | Sponge network | -1.941 | 0.0681 | -2.811 | 0.0014 | 0.301 |
30 | RP11-389C8.2 |
hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-200a-3p;hsa-miR-224-3p;hsa-miR-3065-3p;hsa-miR-3065-5p;hsa-miR-33a-3p;hsa-miR-429;hsa-miR-550a-5p;hsa-miR-93-5p | 17 | CCND2 | Sponge network | -3.089 | 2.0E-5 | -2.811 | 0.0014 | 0.293 |
31 | RP11-554A11.4 | hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-15b-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-20b-5p;hsa-miR-324-3p;hsa-miR-33a-3p | 10 | CCND2 | Sponge network | -5.361 | 2.0E-5 | -2.811 | 0.0014 | 0.29 |
32 | MIR143HG |
hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-200a-3p;hsa-miR-20b-5p;hsa-miR-224-3p;hsa-miR-3065-3p;hsa-miR-3065-5p;hsa-miR-30d-3p;hsa-miR-324-3p;hsa-miR-33a-3p;hsa-miR-378a-3p;hsa-miR-429;hsa-miR-550a-5p;hsa-miR-93-5p | 21 | CCND2 | Sponge network | -6.51 | 0 | -2.811 | 0.0014 | 0.285 |
33 | SOCS2-AS1 | hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-200a-3p;hsa-miR-20b-5p;hsa-miR-324-3p;hsa-miR-33a-3p;hsa-miR-93-5p | 12 | CCND2 | Sponge network | -4.167 | 1.0E-5 | -2.811 | 0.0014 | 0.258 |
34 | RP11-597D13.9 |
hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-200a-3p;hsa-miR-20b-5p;hsa-miR-30d-3p;hsa-miR-429;hsa-miR-93-5p;hsa-miR-96-5p | 14 | CCND2 | Sponge network | -2.494 | 0.07597 | -2.811 | 0.0014 | 0.252 |
35 | DNM3OS |
hsa-miR-106a-5p;hsa-miR-106b-5p;hsa-miR-130b-5p;hsa-miR-141-3p;hsa-miR-15b-5p;hsa-miR-16-2-3p;hsa-miR-182-5p;hsa-miR-183-5p;hsa-miR-191-5p;hsa-miR-200a-3p;hsa-miR-3065-3p;hsa-miR-3065-5p;hsa-miR-30d-3p;hsa-miR-33a-3p;hsa-miR-378a-3p;hsa-miR-429;hsa-miR-550a-5p;hsa-miR-93-5p;hsa-miR-96-5p | 19 | CCND2 | Sponge network | -3.933 | 0.00059 | -2.811 | 0.0014 | 0.25 |